RNA–Protein interactions for RNA: ENST00000370126.1

RTCA-202, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-202ENST00000370126 SPEF2Q9C093 1822 aa27.64■■■□□ 2.01
RTCA-202ENST00000370126 SCN9AQ15858 1988 aa27.63■■■□□ 2.01
RTCA-202ENST00000370126 RASSF10A6NK89 507 aa27.63■■■□□ 2.01
RTCA-202ENST00000370126 VEGFBP49765 207 aa27.63■■■□□ 2.01
RTCA-202ENST00000370126 FMR1Q06787 632 aaKnown RBP eCLIP27.63■■■□□ 2.01
RTCA-202ENST00000370126 FKBP5Q13451 457 aaPredicted RBP27.63■■■□□ 2.01
RTCA-202ENST00000370126 DOK7Q18PE1 504 aa27.63■■■□□ 2.01
RTCA-202ENST00000370126 TTLL11Q8NHH1 800 aa27.63■■■□□ 2.01
RTCA-202ENST00000370126 SPINK5Q9NQ38 1064 aaPredicted RBP27.63■■■□□ 2.01
RTCA-202ENST00000370126 CNOT7Q9UIV1 285 aaKnown RBP27.63■■■□□ 2.01
RTCA-202ENST00000370126 GGA1Q9UJY5 639 aa27.63■■■□□ 2.01
RTCA-202ENST00000370126 RTL9Q8NET4 1388 aa27.62■■■□□ 2.01
RTCA-202ENST00000370126 SHTN1A0MZ66 631 aa27.62■■■□□ 2.01
RTCA-202ENST00000370126 H7C1W4 665 aa27.62■■■□□ 2.01
RTCA-202ENST00000370126 TRAF5O00463 557 aa27.62■■■□□ 2.01
RTCA-202ENST00000370126 COL13A1Q5TAT6 717 aaPredicted RBP27.62■■■□□ 2.01
RTCA-202ENST00000370126 ZC3H12CQ9C0D7 883 aaKnown RBP27.62■■■□□ 2.01
RTCA-202ENST00000370126 ZBTB12Q9Y330 459 aaPredicted RBP27.62■■■□□ 2.01
RTCA-202ENST00000370126 HIRAP54198 1017 aaPredicted RBP27.61■■■□□ 2.01
RTCA-202ENST00000370126 UBE3BQ7Z3V4 1068 aa27.61■■■□□ 2.01
RTCA-202ENST00000370126 MICALL2Q8IY33 904 aa27.61■■■□□ 2.01
RTCA-202ENST00000370126 TRPM4Q8TD43 1214 aa27.61■■■□□ 2.01
RTCA-202ENST00000370126 DNAAF4Q8WXU2 420 aa27.61■■■□□ 2.01
RTCA-202ENST00000370126 DPF2Q92785 391 aa27.61■■■□□ 2.01
RTCA-202ENST00000370126 CDC5LQ99459 802 aaKnown RBP27.61■■■□□ 2.01
RTCA-202ENST00000370126 GREM2Q9H772 168 aa27.61■■■□□ 2.01
RTCA-202ENST00000370126 PGAP2Q9UHJ9 254 aa27.61■■■□□ 2.01
RTCA-202ENST00000370126 GCKRQ14397 625 aa27.6■■■□□ 2.01
RTCA-202ENST00000370126 ZC3H15Q8WU90 426 aaKnown RBP27.6■■■□□ 2.01
RTCA-202ENST00000370126 KCNQ5Q9NR82 932 aa27.6■■■□□ 2.01
RTCA-202ENST00000370126 ABT1Q9ULW3 272 aaKnown RBP27.6■■■□□ 2.01
RTCA-202ENST00000370126 XDHP47989 1333 aa27.6■■■□□ 2.01
RTCA-202ENST00000370126 H7C1D1 291 aa27.59■■■□□ 2.01
RTCA-202ENST00000370126 DEFB115Q30KQ5 88 aa27.59■■■□□ 2.01
RTCA-202ENST00000370126 PSME4Q14997 1843 aa27.58■■■□□ 2.01
RTCA-202ENST00000370126 RPS12P25398 132 aaKnown RBP27.58■■■□□ 2.01
RTCA-202ENST00000370126 LINS1Q8NG48 757 aa27.58■■■□□ 2.01
RTCA-202ENST00000370126 MYH16Q9H6N6 1097 aa27.58■■■□□ 2.01
RTCA-202ENST00000370126 CASP7P55210 303 aa27.57■■■□□ 2
RTCA-202ENST00000370126 CST9Q5W186 159 aa27.57■■■□□ 2
RTCA-202ENST00000370126 PLA2G12BQ9BX93 195 aa27.57■■■□□ 2
RTCA-202ENST00000370126 GLIS2Q9BZE0 524 aaPredicted RBP27.56■■■□□ 2
RTCA-202ENST00000370126 BSDC1Q9NW68 430 aaPredicted RBP27.56■■■□□ 2
RTCA-202ENST00000370126 ATP2B4P23634 1241 aa27.55■■■□□ 2
RTCA-202ENST00000370126 G3V3G9 751 aa27.54■■■□□ 2
RTCA-202ENST00000370126 VIL1P09327 827 aaKnown RBP27.54■■■□□ 2
RTCA-202ENST00000370126 DCAF8Q5TAQ9 597 aa27.54■■■□□ 2
RTCA-202ENST00000370126 SAMD7Q7Z3H4 446 aa27.54■■■□□ 2
RTCA-202ENST00000370126 MINPP1Q9UNW1 487 aa27.54■■■□□ 2
RTCA-202ENST00000370126 THSD7BQ9C0I4 1608 aa27.53■■■□□ 2
RTCA-202ENST00000370126 ZNF609O15014 1411 aa27.53■■■□□ 2
RTCA-202ENST00000370126 ZNF521Q96K83 1311 aa27.53■■■□□ 2
RTCA-202ENST00000370126 WDR33Q9C0J8 1336 aaKnown RBP27.53■■■□□ 2
RTCA-202ENST00000370126 EGFRP00533 1210 aa27.52■■■□□ 2
RTCA-202ENST00000370126 TBC1D10BQ4KMP7 808 aaPredicted RBP27.52■■■□□ 2
RTCA-202ENST00000370126 CDC37L1Q7L3B6 337 aa27.52■■■□□ 2
RTCA-202ENST00000370126 TLL2Q9Y6L7 1015 aa27.52■■■□□ 2
RTCA-202ENST00000370126 MED23Q9ULK4 1368 aa27.51■■□□□ 1.99
RTCA-202ENST00000370126 F6X3S4 739 aa27.51■■□□□ 1.99
RTCA-202ENST00000370126 CELF2O95319 508 aaKnown RBP27.51■■□□□ 1.99
RTCA-202ENST00000370126 FAM161AQ3B820 660 aa27.51■■□□□ 1.99
RTCA-202ENST00000370126 WTIPA6NIX2 430 aaPredicted RBP27.5■■□□□ 1.99
RTCA-202ENST00000370126 FOXN1O15353 648 aa27.5■■□□□ 1.99
RTCA-202ENST00000370126 CSF1RP07333 972 aa27.5■■□□□ 1.99
RTCA-202ENST00000370126 ITGA6P23229 1130 aa27.5■■□□□ 1.99
RTCA-202ENST00000370126 IGHMBP2P38935 993 aaKnown RBP27.5■■□□□ 1.99
RTCA-202ENST00000370126 BEND3Q5T5X7 828 aa27.49■■□□□ 1.99
RTCA-202ENST00000370126 WBP1LQ9NX94 342 aa27.49■■□□□ 1.99
RTCA-202ENST00000370126 POLR2AP24928 1970 aaKnown RBP27.48■■□□□ 1.99
RTCA-202ENST00000370126 CCT4P50991 539 aaKnown RBP27.48■■□□□ 1.99
RTCA-202ENST00000370126 RSBN1LQ6PCB5 846 aaPredicted RBP27.48■■□□□ 1.99
RTCA-202ENST00000370126 PODNQ7Z5L7 613 aa27.48■■□□□ 1.99
RTCA-202ENST00000370126 AIDAQ96BJ3 306 aa27.48■■□□□ 1.99
RTCA-202ENST00000370126 CAPNS2Q96L46 248 aa27.48■■□□□ 1.99
RTCA-202ENST00000370126 ECE1P42892 770 aa27.47■■□□□ 1.99
RTCA-202ENST00000370126 KIF4BQ2VIQ3 1234 aa27.47■■□□□ 1.99
RTCA-202ENST00000370126 RBM26Q5T8P6 1007 aaKnown RBP27.47■■□□□ 1.99
RTCA-202ENST00000370126 CYP4F22Q6NT55 531 aa27.47■■□□□ 1.99
RTCA-202ENST00000370126 PAXIP1Q6ZW49 1069 aaPredicted RBP27.47■■□□□ 1.99
RTCA-202ENST00000370126 USP48Q86UV5 1035 aa27.47■■□□□ 1.99
RTCA-202ENST00000370126 TNS4Q8IZW8 715 aa27.47■■□□□ 1.99
RTCA-202ENST00000370126 AGBL3Q8NEM8 1001 aa27.47■■□□□ 1.99
RTCA-202ENST00000370126 ZNF646O15015 1829 aaPredicted RBP27.46■■□□□ 1.99
RTCA-202ENST00000370126 SAPCD2Q86UD0 394 aa27.46■■□□□ 1.99
RTCA-202ENST00000370126 ZNF408Q9H9D4 720 aa27.46■■□□□ 1.99
RTCA-202ENST00000370126 ZNF280AP59817 542 aaPredicted RBP27.45■■□□□ 1.98
RTCA-202ENST00000370126 MPHOSPH8Q99549 860 aa27.45■■□□□ 1.98
RTCA-202ENST00000370126 LEMD3Q9Y2U8 911 aa27.45■■□□□ 1.98
RTCA-202ENST00000370126 USP17L3A6NCW0 530 aa27.44■■□□□ 1.98
RTCA-202ENST00000370126 USP17L4A6NCW7 530 aa27.44■■□□□ 1.98
RTCA-202ENST00000370126 FOXO4P98177 505 aa27.44■■□□□ 1.98
RTCA-202ENST00000370126 USP17L1Q7RTZ2 530 aa27.44■■□□□ 1.98
RTCA-202ENST00000370126 KRT26Q7Z3Y9 468 aa27.44■■□□□ 1.98
RTCA-202ENST00000370126 GMLQ99445 158 aa27.44■■□□□ 1.98
RTCA-202ENST00000370126 ANKRD2Q9GZV1 360 aa27.44■■□□□ 1.98
RTCA-202ENST00000370126 A0A1B0GUL6 1792 aa27.43■■□□□ 1.98
RTCA-202ENST00000370126 CTCFP49711 727 aaPredicted RBP27.43■■□□□ 1.98
RTCA-202ENST00000370126 MAP2K1Q02750 393 aaPredicted RBP27.43■■□□□ 1.98
RTCA-202ENST00000370126 DLK2Q6UY11 383 aa27.43■■□□□ 1.98
RTCA-202ENST00000370126 HHIPL1Q96JK4 782 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms