RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 TMCO3Q6UWJ1 677 aa19.74■□□□□ 0.75
DKC1-201ENST00000369550 ALDH8A1Q9H2A2 487 aaPredicted RBP19.74■□□□□ 0.75
DKC1-201ENST00000369550 C9orf78Q9NZ63 289 aaPredicted RBP19.74■□□□□ 0.75
DKC1-201ENST00000369550 CHPF2Q9P2E5 772 aa19.74■□□□□ 0.75
DKC1-201ENST00000369550 POLR3GO15318 223 aaPredicted RBP19.74■□□□□ 0.75
DKC1-201ENST00000369550 UBXN4Q92575 508 aa19.74■□□□□ 0.75
DKC1-201ENST00000369550 HMG20BQ9P0W2 317 aa19.74■□□□□ 0.75
DKC1-201ENST00000369550 IMPACTQ9P2X3 320 aa19.74■□□□□ 0.75
DKC1-201ENST00000369550 RGPD8O14715 1765 aaPredicted RBP19.74■□□□□ 0.75
DKC1-201ENST00000369550 OSBPL5Q9H0X9 879 aaPredicted RBP19.73■□□□□ 0.75
DKC1-201ENST00000369550 BOLA2Q9H3K6 86 aa19.73■□□□□ 0.75
DKC1-201ENST00000369550 SBNO1A3KN83 1393 aa19.73■□□□□ 0.75
DKC1-201ENST00000369550 CHD2O14647 1828 aaKnown RBP19.73■□□□□ 0.75
DKC1-201ENST00000369550 ANKARQ7Z5J8 1434 aa19.73■□□□□ 0.75
DKC1-201ENST00000369550 TMC6Q7Z403 805 aa19.73■□□□□ 0.75
DKC1-201ENST00000369550 CCDC8Q9H0W5 538 aaPredicted RBP19.73■□□□□ 0.75
DKC1-201ENST00000369550 ME1P48163 572 aa19.72■□□□□ 0.75
DKC1-201ENST00000369550 FAM160A1Q05DH4 1040 aa19.72■□□□□ 0.75
DKC1-201ENST00000369550 NBPF11Q86T75 865 aa19.72■□□□□ 0.75
DKC1-201ENST00000369550 CCDC150Q8NCX0 1101 aa19.72■□□□□ 0.75
DKC1-201ENST00000369550 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.72■□□□□ 0.75
DKC1-201ENST00000369550 NPHP4O75161 1426 aaPredicted RBP19.72■□□□□ 0.75
DKC1-201ENST00000369550 ANXA1P04083 346 aa19.72■□□□□ 0.75
DKC1-201ENST00000369550 KCNA6P17658 529 aa19.72■□□□□ 0.75
DKC1-201ENST00000369550 PLA2G4AP47712 749 aa19.72■□□□□ 0.75
DKC1-201ENST00000369550 CCDC93Q567U6 631 aa19.72■□□□□ 0.75
DKC1-201ENST00000369550 SDF4Q9BRK5 362 aa19.72■□□□□ 0.75
DKC1-201ENST00000369550 TSPYL1Q9H0U9 437 aa19.72■□□□□ 0.75
DKC1-201ENST00000369550 ZNF142P52746 1687 aaPredicted RBP19.72■□□□□ 0.75
DKC1-201ENST00000369550 CACNA1FO60840 1977 aa19.71■□□□□ 0.75
DKC1-201ENST00000369550 PSDA5PKW4 1024 aaPredicted RBP19.71■□□□□ 0.75
DKC1-201ENST00000369550 TPM4P67936 248 aa19.71■□□□□ 0.75
DKC1-201ENST00000369550 ZNF589Q86UQ0 364 aaPredicted RBP19.71■□□□□ 0.75
DKC1-201ENST00000369550 PLCD3Q8N3E9 789 aa19.71■□□□□ 0.75
DKC1-201ENST00000369550 FSIP1Q8NA03 581 aa19.71■□□□□ 0.75
DKC1-201ENST00000369550 MNS1Q8NEH6 495 aa19.71■□□□□ 0.75
DKC1-201ENST00000369550 N4BP2Q86UW6 1770 aaPredicted RBP19.71■□□□□ 0.75
DKC1-201ENST00000369550 KRT32Q14532 448 aa19.71■□□□□ 0.75
DKC1-201ENST00000369550 NGDNQ8NEJ9 315 aaKnown RBP19.71■□□□□ 0.75
DKC1-201ENST00000369550 TRIM34Q9BYJ4 488 aa19.71■□□□□ 0.75
DKC1-201ENST00000369550 BABAM1Q9NWV8 329 aa19.71■□□□□ 0.75
DKC1-201ENST00000369550 RCOR1Q9UKL0 485 aa19.71■□□□□ 0.75
DKC1-201ENST00000369550 Q6ZUG5 572 aa19.7■□□□□ 0.74
DKC1-201ENST00000369550 NEK1Q96PY6 1258 aa19.7■□□□□ 0.74
DKC1-201ENST00000369550 XPO4Q9C0E2 1151 aaKnown RBP19.7■□□□□ 0.74
DKC1-201ENST00000369550 DNAI1Q9UI46 699 aa19.7■□□□□ 0.74
DKC1-201ENST00000369550 MTX1Q13505 466 aa19.7■□□□□ 0.74
DKC1-201ENST00000369550 ARMCX5Q6P1M9 558 aa19.7■□□□□ 0.74
DKC1-201ENST00000369550 NEK11Q8NG66 645 aa19.7■□□□□ 0.74
DKC1-201ENST00000369550 IFNKQ9P0W0 207 aa19.7■□□□□ 0.74
DKC1-201ENST00000369550 FMN2Q9NZ56 1722 aa19.69■□□□□ 0.74
DKC1-201ENST00000369550 RAD51AP2Q09MP3 1159 aa19.69■□□□□ 0.74
DKC1-201ENST00000369550 EAF2Q96CJ1 260 aaPredicted RBP19.69■□□□□ 0.74
DKC1-201ENST00000369550 FMNL2Q96PY5 1086 aa19.69■□□□□ 0.74
DKC1-201ENST00000369550 USP28Q96RU2 1077 aa19.69■□□□□ 0.74
DKC1-201ENST00000369550 ADD1P35611 737 aaKnown RBP19.69■□□□□ 0.74
DKC1-201ENST00000369550 G3BP1Q13283 466 aaKnown RBP eCLIP19.69■□□□□ 0.744e-7■■■□□ 15.9
DKC1-201ENST00000369550 SNRKQ9NRH2 765 aa19.69■□□□□ 0.74
DKC1-201ENST00000369550 TUBB4AP04350 444 aa19.68■□□□□ 0.74
DKC1-201ENST00000369550 NUTM2GQ5VZR2 741 aa19.68■□□□□ 0.74
DKC1-201ENST00000369550 ANKLE2Q86XL3 938 aa19.68■□□□□ 0.74
DKC1-201ENST00000369550 ENGASEQ8NFI3 743 aa19.68■□□□□ 0.74
DKC1-201ENST00000369550 LTV1Q96GA3 475 aaPredicted RBP19.68■□□□□ 0.74
DKC1-201ENST00000369550 ZNF396Q96N95 335 aaPredicted RBP19.68■□□□□ 0.74
DKC1-201ENST00000369550 LRRC2Q9BYS8 371 aa19.68■□□□□ 0.74
DKC1-201ENST00000369550 TLR7Q9NYK1 1049 aaKnown RBP19.68■□□□□ 0.74
DKC1-201ENST00000369550 ORC3Q9UBD5 711 aaPredicted RBP19.68■□□□□ 0.74
DKC1-201ENST00000369550 ETF1P62495 437 aaKnown RBP19.67■□□□□ 0.74
DKC1-201ENST00000369550 SCRN1Q12765 414 aa19.67■□□□□ 0.74
DKC1-201ENST00000369550 TSGA10IPQ3SY00 556 aa19.67■□□□□ 0.74
DKC1-201ENST00000369550 TXLNBQ8N3L3 684 aa19.67■□□□□ 0.74
DKC1-201ENST00000369550 ADAMTSL3P82987 1691 aa19.67■□□□□ 0.74
DKC1-201ENST00000369550 MED23Q9ULK4 1368 aa19.67■□□□□ 0.74
DKC1-201ENST00000369550 ZRANB2O95218 330 aaKnown RBP eCLIP19.67■□□□□ 0.742e-6■■■□□ 15.5
DKC1-201ENST00000369550 PIK3C2AO00443 1686 aa19.67■□□□□ 0.74
DKC1-201ENST00000369550 TAF5LO75529 589 aa19.66■□□□□ 0.74
DKC1-201ENST00000369550 URI1O94763 535 aaPredicted RBP19.66■□□□□ 0.74
DKC1-201ENST00000369550 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.66■□□□□ 0.74
DKC1-201ENST00000369550 LRRC37A3O60309 1634 aa19.66■□□□□ 0.74
DKC1-201ENST00000369550 SEC31AO94979 1220 aaKnown RBP19.66■□□□□ 0.74
DKC1-201ENST00000369550 DPCR1Q3MIW9 517 aa19.66■□□□□ 0.74
DKC1-201ENST00000369550 NAA16Q6N069 864 aaPredicted RBP19.66■□□□□ 0.74
DKC1-201ENST00000369550 SIL1Q9H173 461 aa19.66■□□□□ 0.74
DKC1-201ENST00000369550 FEZ2Q9UHY8 353 aaPredicted RBP19.66■□□□□ 0.74
DKC1-201ENST00000369550 CCP110O43303 1012 aa19.65■□□□□ 0.74
DKC1-201ENST00000369550 SASH1O94885 1247 aa19.65■□□□□ 0.74
DKC1-201ENST00000369550 PPFIA3O75145 1194 aa19.65■□□□□ 0.74
DKC1-201ENST00000369550 GPS2Q13227 327 aa19.65■□□□□ 0.74
DKC1-201ENST00000369550 MRPS27Q92552 414 aaKnown RBP19.65■□□□□ 0.74
DKC1-201ENST00000369550 HDAC5Q9UQL6 1122 aa19.65■□□□□ 0.74
DKC1-201ENST00000369550 KCNJ6P48051 423 aa19.64■□□□□ 0.73
DKC1-201ENST00000369550 GUCY1B3Q02153 619 aa19.64■□□□□ 0.73
DKC1-201ENST00000369550 DHX8Q14562 1220 aaKnown RBP19.64■□□□□ 0.73
DKC1-201ENST00000369550 KRBA2Q6ZNG9 492 aa19.64■□□□□ 0.73
DKC1-201ENST00000369550 CHMP4AQ9BY43 222 aa19.64■□□□□ 0.73
DKC1-201ENST00000369550 MAP3K2Q9Y2U5 619 aa19.64■□□□□ 0.73
DKC1-201ENST00000369550 PHLPP2Q6ZVD8 1323 aa19.64■□□□□ 0.73
DKC1-201ENST00000369550 A0A1B0GVL5 298 aa19.64■□□□□ 0.73
DKC1-201ENST00000369550 EIF4A1P60842 406 aaKnown RBP19.64■□□□□ 0.73
DKC1-201ENST00000369550 PTPDC1A2A3K4 754 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms