RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 ERICH4A6NGS2 130 aa8.97□□□□□ -0.97
BRCC3-203ENST00000369459 ONECUT3O60422 494 aaPredicted RBP8.97□□□□□ -0.97
BRCC3-203ENST00000369459 ECM2O94769 699 aaPredicted RBP8.97□□□□□ -0.97
BRCC3-203ENST00000369459 INTS3Q68E01 1043 aaKnown RBP8.97□□□□□ -0.97
BRCC3-203ENST00000369459 TTC5Q8N0Z6 440 aa8.97□□□□□ -0.97
BRCC3-203ENST00000369459 DONSONQ9NYP3 566 aa8.97□□□□□ -0.97
BRCC3-203ENST00000369459 COMMD10Q9Y6G5 202 aa8.97□□□□□ -0.97
BRCC3-203ENST00000369459 ARFGEF2Q9Y6D5 1785 aa8.97□□□□□ -0.97
BRCC3-203ENST00000369459 ATP10DQ9P241 1426 aa8.97□□□□□ -0.97
BRCC3-203ENST00000369459 SYNRGQ9UMZ2 1314 aa8.97□□□□□ -0.97
BRCC3-203ENST00000369459 CTAGE5O15320 804 aa8.97□□□□□ -0.97
BRCC3-203ENST00000369459 KCNJ4P48050 445 aa8.97□□□□□ -0.97
BRCC3-203ENST00000369459 BIRC2Q13490 618 aa8.97□□□□□ -0.97
BRCC3-203ENST00000369459 DDB1Q16531 1140 aa8.97□□□□□ -0.97
BRCC3-203ENST00000369459 TEX13AQ9BXU3 409 aaPredicted RBP8.97□□□□□ -0.97
BRCC3-203ENST00000369459 DBF4Q9UBU7 674 aaPredicted RBP8.97□□□□□ -0.97
BRCC3-203ENST00000369459 FBXO9Q9UK97 447 aaPredicted RBP8.97□□□□□ -0.97
BRCC3-203ENST00000369459 CCDC189A1A4V9 331 aa8.96□□□□□ -0.97
BRCC3-203ENST00000369459 IPO7O95373 1038 aaKnown RBP8.96□□□□□ -0.97
BRCC3-203ENST00000369459 SNRPA1P09661 255 aaKnown RBP8.96□□□□□ -0.97
BRCC3-203ENST00000369459 C20orf194Q5TEA3 1177 aa8.96□□□□□ -0.97
BRCC3-203ENST00000369459 NFATC2IPQ8NCF5 419 aa8.96□□□□□ -0.97
BRCC3-203ENST00000369459 MIS18AQ9NYP9 233 aa8.96□□□□□ -0.97
BRCC3-203ENST00000369459 USP21Q9UK80 565 aa8.96□□□□□ -0.97
BRCC3-203ENST00000369459 LY75O60449 1722 aa8.96□□□□□ -0.97
BRCC3-203ENST00000369459 ABCD1P33897 745 aa8.96□□□□□ -0.98
BRCC3-203ENST00000369459 DNAJC21Q5F1R6 531 aaKnown RBP8.96□□□□□ -0.98
BRCC3-203ENST00000369459 C8orf37Q96NL8 207 aa8.96□□□□□ -0.98
BRCC3-203ENST00000369459 C22orf23Q9BZE7 217 aa8.96□□□□□ -0.98
BRCC3-203ENST00000369459 HYPKQ9NX55 129 aa8.96□□□□□ -0.98
BRCC3-203ENST00000369459 TRPC5Q9UL62 973 aaPredicted RBP8.96□□□□□ -0.98
BRCC3-203ENST00000369459 ANKRD36CQ5JPF3 1778 aa8.95□□□□□ -0.98
BRCC3-203ENST00000369459 HMGB1P1B2RPK0 211 aaPredicted RBP8.95□□□□□ -0.98
BRCC3-203ENST00000369459 FLT3P36888 993 aa8.95□□□□□ -0.98
BRCC3-203ENST00000369459 CCT4P50991 539 aaKnown RBP8.95□□□□□ -0.98
BRCC3-203ENST00000369459 HMGN5P82970 282 aaKnown RBP8.95□□□□□ -0.98
BRCC3-203ENST00000369459 TMOD3Q9NYL9 352 aa8.95□□□□□ -0.98
BRCC3-203ENST00000369459 AFDNP55196 1824 aaKnown RBP8.95□□□□□ -0.98
BRCC3-203ENST00000369459 PPP1R12AO14974 1030 aaPredicted RBP8.95□□□□□ -0.98
BRCC3-203ENST00000369459 MEX3CQ5U5Q3 659 aaKnown RBP8.95□□□□□ -0.98
BRCC3-203ENST00000369459 BCL2L13Q9BXK5 485 aa8.95□□□□□ -0.98
BRCC3-203ENST00000369459 BTAF1O14981 1849 aa8.94□□□□□ -0.98
BRCC3-203ENST00000369459 ESPNB1AK53 854 aa8.94□□□□□ -0.98
BRCC3-203ENST00000369459 LMNB1P20700 586 aa8.94□□□□□ -0.98
BRCC3-203ENST00000369459 KRT24Q2M2I5 525 aa8.94□□□□□ -0.98
BRCC3-203ENST00000369459 NYAP1Q6ZVC0 841 aa8.94□□□□□ -0.98
BRCC3-203ENST00000369459 CENPQQ7L2Z9 268 aaPredicted RBP8.94□□□□□ -0.98
BRCC3-203ENST00000369459 PANK1Q8TE04 598 aa8.94□□□□□ -0.98
BRCC3-203ENST00000369459 SNRNP27Q8WVK2 155 aaKnown RBP8.94□□□□□ -0.98
BRCC3-203ENST00000369459 RSPH1Q8WYR4 309 aa8.94□□□□□ -0.98
BRCC3-203ENST00000369459 DDX21Q9NR30 783 aaKnown RBP eCLIP8.94□□□□□ -0.98
BRCC3-203ENST00000369459 BRWD3Q6RI45 1802 aa8.94□□□□□ -0.98
BRCC3-203ENST00000369459 ELL2O00472 640 aaPredicted RBP8.94□□□□□ -0.98
BRCC3-203ENST00000369459 RLBP1P12271 317 aa8.94□□□□□ -0.98
BRCC3-203ENST00000369459 ICE2Q659A1 982 aa8.94□□□□□ -0.98
BRCC3-203ENST00000369459 RBM46Q8TBY0 533 aaKnown RBP8.94□□□□□ -0.98
BRCC3-203ENST00000369459 DDX54Q8TDD1 881 aaKnown RBP8.94□□□□□ -0.98
BRCC3-203ENST00000369459 NUCKS1Q9H1E3 243 aaKnown RBP8.94□□□□□ -0.98
BRCC3-203ENST00000369459 CXorf56Q9H5V9 222 aa8.94□□□□□ -0.98
BRCC3-203ENST00000369459 MAP3K20Q9NYL2 800 aaKnown RBP8.94□□□□□ -0.98
BRCC3-203ENST00000369459 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.94□□□□□ -0.98
BRCC3-203ENST00000369459 AFF2P51816 1311 aa8.94□□□□□ -0.98
BRCC3-203ENST00000369459 RGPD3A6NKT7 1758 aaPredicted RBP8.94□□□□□ -0.98
BRCC3-203ENST00000369459 RGPD4Q7Z3J3 1758 aa8.94□□□□□ -0.98
BRCC3-203ENST00000369459 FLIIQ13045 1269 aa8.93□□□□□ -0.98
BRCC3-203ENST00000369459 OGFOD1Q8N543 542 aa8.93□□□□□ -0.98
BRCC3-203ENST00000369459 C1orf131Q8NDD1 294 aaKnown RBP8.93□□□□□ -0.98
BRCC3-203ENST00000369459 GJD4Q96KN9 370 aaPredicted RBP8.93□□□□□ -0.98
BRCC3-203ENST00000369459 TSPYL1Q9H0U9 437 aa8.93□□□□□ -0.98
BRCC3-203ENST00000369459 KLF15Q9UIH9 416 aa8.93□□□□□ -0.98
BRCC3-203ENST00000369459 FAN1Q9Y2M0 1017 aa8.93□□□□□ -0.98
BRCC3-203ENST00000369459 COG6Q9Y2V7 657 aa8.93□□□□□ -0.98
BRCC3-203ENST00000369459 KDM2BQ8NHM5 1336 aa8.93□□□□□ -0.98
BRCC3-203ENST00000369459 TAF1LQ8IZX4 1826 aa8.93□□□□□ -0.98
BRCC3-203ENST00000369459 KCNQ3O43525 872 aa8.93□□□□□ -0.98
BRCC3-203ENST00000369459 KIF1CO43896 1103 aaKnown RBP8.93□□□□□ -0.98
BRCC3-203ENST00000369459 HMGB2P26583 209 aaKnown RBP8.93□□□□□ -0.98
BRCC3-203ENST00000369459 PDE6BP35913 854 aa8.93□□□□□ -0.98
BRCC3-203ENST00000369459 E2F5Q15329 346 aa8.93□□□□□ -0.98
BRCC3-203ENST00000369459 C4orf46Q504U0 113 aa8.93□□□□□ -0.98
BRCC3-203ENST00000369459 TMEM57Q8N5G2 664 aa8.93□□□□□ -0.98
BRCC3-203ENST00000369459 SREK1Q8WXA9 508 aaKnown RBP8.93□□□□□ -0.98
BRCC3-203ENST00000369459 LRRC27Q9C0I9 530 aa8.93□□□□□ -0.98
BRCC3-203ENST00000369459 ZBTB40Q9NUA8 1239 aa8.93□□□□□ -0.98
BRCC3-203ENST00000369459 DDX58O95786 925 aaKnown RBP8.92□□□□□ -0.98
BRCC3-203ENST00000369459 TPM3P06753 285 aa8.92□□□□□ -0.98
BRCC3-203ENST00000369459 IFT88Q13099 833 aa8.92□□□□□ -0.98
BRCC3-203ENST00000369459 SMARCC1Q92922 1105 aaPredicted RBP8.92□□□□□ -0.98
BRCC3-203ENST00000369459 ZNF496Q96IT1 587 aaPredicted RBP8.92□□□□□ -0.98
BRCC3-203ENST00000369459 CIZ1Q9ULV3 898 aaPredicted RBP8.92□□□□□ -0.98
BRCC3-203ENST00000369459 ZBTB7BO15156 539 aaPredicted RBP8.92□□□□□ -0.98
BRCC3-203ENST00000369459 FAM163BP0C2L3 166 aa8.92□□□□□ -0.98
BRCC3-203ENST00000369459 CWC25Q9NXE8 425 aaPredicted RBP8.92□□□□□ -0.98
BRCC3-203ENST00000369459 ZNF232Q9UNY5 417 aa8.92□□□□□ -0.98
BRCC3-203ENST00000369459 IPO5O00410 1097 aaKnown RBP8.91□□□□□ -0.98
BRCC3-203ENST00000369459 TERF1P54274 439 aa8.91□□□□□ -0.98
BRCC3-203ENST00000369459 CDC37Q16543 378 aaPredicted RBP8.91□□□□□ -0.98
BRCC3-203ENST00000369459 LRCH2Q5VUJ6 765 aa8.91□□□□□ -0.98
BRCC3-203ENST00000369459 ZNF772Q68DY9 489 aaPredicted RBP8.91□□□□□ -0.98
BRCC3-203ENST00000369459 C16orf87Q6PH81 154 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms