RNA–Protein interactions for RNA: ENST00000369215.4

PRDM13-202, Transcript of PR/SET domain 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM13, Length 2,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13-202ENST00000369215 RNF20Q5VTR2 975 aa28.28■■■□□ 2.12
PRDM13-202ENST00000369215 SUSD4Q5VX71 490 aa28.28■■■□□ 2.12
PRDM13-202ENST00000369215 XAGE2Q96GT9 111 aa28.28■■■□□ 2.12
PRDM13-202ENST00000369215 ZSWIM6Q9HCJ5 1215 aa28.28■■■□□ 2.12
PRDM13-202ENST00000369215 XRCC6P12956 609 aaKnown RBP eCLIP28.28■■■□□ 2.12
PRDM13-202ENST00000369215 PTMSP20962 102 aa28.28■■■□□ 2.12
PRDM13-202ENST00000369215 PARP10Q53GL7 1025 aa28.28■■■□□ 2.12
PRDM13-202ENST00000369215 GORABQ5T7V8 394 aa28.28■■■□□ 2.12
PRDM13-202ENST00000369215 SH3TC1Q8TE82 1336 aa28.27■■■□□ 2.12
PRDM13-202ENST00000369215 MCMDC2Q4G0Z9 681 aa28.27■■■□□ 2.12
PRDM13-202ENST00000369215 METTL24Q5JXM2 366 aa28.27■■■□□ 2.12
PRDM13-202ENST00000369215 CYP46A1Q9Y6A2 500 aa28.27■■■□□ 2.12
PRDM13-202ENST00000369215 ADORA1P30542 326 aa28.27■■■□□ 2.12
PRDM13-202ENST00000369215 PKP1Q13835 747 aa28.27■■■□□ 2.12
PRDM13-202ENST00000369215 FAM43AQ8N2R8 423 aa28.27■■■□□ 2.12
PRDM13-202ENST00000369215 UTP14AQ9BVJ6 771 aaKnown RBP28.27■■■□□ 2.12
PRDM13-202ENST00000369215 TTC39AQ5SRH9 613 aa28.26■■■□□ 2.11
PRDM13-202ENST00000369215 CNNM1Q9NRU3 951 aa28.26■■■□□ 2.11
PRDM13-202ENST00000369215 VPS53Q5VIR6 699 aa28.26■■■□□ 2.11
PRDM13-202ENST00000369215 UBE2Q2Q8WVN8 375 aa28.26■■■□□ 2.11
PRDM13-202ENST00000369215 LIMCH1Q9UPQ0 1083 aa28.26■■■□□ 2.11
PRDM13-202ENST00000369215 CPA1P15085 419 aa28.25■■■□□ 2.11
PRDM13-202ENST00000369215 PDRG1Q9NUG6 133 aa28.25■■■□□ 2.11
PRDM13-202ENST00000369215 HMG20BQ9P0W2 317 aa28.25■■■□□ 2.11
PRDM13-202ENST00000369215 THSD7AQ9UPZ6 1657 aa28.25■■■□□ 2.11
PRDM13-202ENST00000369215 BAG4O95429 457 aaKnown RBP28.24■■■□□ 2.11
PRDM13-202ENST00000369215 ATP2B3Q16720 1220 aa28.24■■■□□ 2.11
PRDM13-202ENST00000369215 RPAP1Q9BWH6 1393 aaPredicted RBP28.24■■■□□ 2.11
PRDM13-202ENST00000369215 CHGBP05060 677 aa28.24■■■□□ 2.11
PRDM13-202ENST00000369215 PSMA5P28066 241 aa28.24■■■□□ 2.11
PRDM13-202ENST00000369215 USPL1Q5W0Q7 1092 aa28.24■■■□□ 2.11
PRDM13-202ENST00000369215 RUFY3Q7L099 469 aa28.24■■■□□ 2.11
PRDM13-202ENST00000369215 SEC62Q99442 399 aaKnown RBP28.23■■■□□ 2.11
PRDM13-202ENST00000369215 HELLSQ9NRZ9 838 aa28.23■■■□□ 2.11
PRDM13-202ENST00000369215 LRP5O75197 1615 aa28.23■■■□□ 2.11
PRDM13-202ENST00000369215 LINC00116Q8NCU8 138 aa28.23■■■□□ 2.11
PRDM13-202ENST00000369215 BCORQ6W2J9 1755 aa28.23■■■□□ 2.11
PRDM13-202ENST00000369215 GOLGA6L22H0YM25 854 aa28.22■■■□□ 2.11
PRDM13-202ENST00000369215 CCDC129Q6ZRS4 1044 aa28.22■■■□□ 2.11
PRDM13-202ENST00000369215 ZDHHC9Q9Y397 364 aa28.22■■■□□ 2.11
PRDM13-202ENST00000369215 ABCC12Q96J65 1359 aa28.22■■■□□ 2.11
PRDM13-202ENST00000369215 FAM177BA6PVY3 158 aa28.22■■■□□ 2.11
PRDM13-202ENST00000369215 NIP7Q9Y221 180 aaKnown RBP eCLIP28.22■■■□□ 2.11
PRDM13-202ENST00000369215 ZNF652Q9Y2D9 606 aa28.22■■■□□ 2.11
PRDM13-202ENST00000369215 HCLS1P14317 486 aaPredicted RBP28.21■■■□□ 2.11
PRDM13-202ENST00000369215 TSGA10IPQ3SY00 556 aa28.21■■■□□ 2.11
PRDM13-202ENST00000369215 U3KPZ7 1027 aaPredicted RBP28.21■■■□□ 2.11
PRDM13-202ENST00000369215 ZMYM1Q5SVZ6 1142 aa28.21■■■□□ 2.11
PRDM13-202ENST00000369215 VGLL2Q8N8G2 317 aa28.21■■■□□ 2.11
PRDM13-202ENST00000369215 FKBP4Q02790 459 aaKnown RBP eCLIP28.2■■■□□ 2.1
PRDM13-202ENST00000369215 DDX60Q8IY21 1712 aaKnown RBP28.19■■■□□ 2.1
PRDM13-202ENST00000369215 RNF113AO15541 343 aaKnown RBP28.19■■■□□ 2.1
PRDM13-202ENST00000369215 NTSR2O95665 410 aa28.19■■■□□ 2.1
PRDM13-202ENST00000369215 HSP90B1P14625 803 aaKnown RBP28.19■■■□□ 2.1
PRDM13-202ENST00000369215 SKOR2Q2VWA4 1001 aaPredicted RBP28.19■■■□□ 2.1
PRDM13-202ENST00000369215 ISY1Q9ULR0 285 aaKnown RBP28.19■■■□□ 2.1
PRDM13-202ENST00000369215 CNTNAP4Q9C0A0 1308 aa28.19■■■□□ 2.1
PRDM13-202ENST00000369215 LAMB2P55268 1798 aa28.19■■■□□ 2.1
PRDM13-202ENST00000369215 LRRFIP1Q32MZ4 808 aaKnown RBP28.18■■■□□ 2.1
PRDM13-202ENST00000369215 NHSQ6T4R5 1651 aa28.18■■■□□ 2.1
PRDM13-202ENST00000369215 BTAF1O14981 1849 aa28.18■■■□□ 2.1
PRDM13-202ENST00000369215 PDE8BO95263 885 aa28.18■■■□□ 2.1
PRDM13-202ENST00000369215 MRE11P49959 708 aa28.18■■■□□ 2.1
PRDM13-202ENST00000369215 CLEC4GQ6UXB4 293 aa28.18■■■□□ 2.1
PRDM13-202ENST00000369215 ZSCAN31Q96LW9 406 aaPredicted RBP28.18■■■□□ 2.1
PRDM13-202ENST00000369215 KRT32Q14532 448 aa28.17■■■□□ 2.1
PRDM13-202ENST00000369215 MEX3CQ5U5Q3 659 aaKnown RBP28.17■■■□□ 2.1
PRDM13-202ENST00000369215 BLOC1S2Q6QNY1 142 aa28.17■■■□□ 2.1
PRDM13-202ENST00000369215 PTF1AQ7RTS3 328 aa28.17■■■□□ 2.1
PRDM13-202ENST00000369215 CERKQ8TCT0 537 aa28.17■■■□□ 2.1
PRDM13-202ENST00000369215 LARP6Q9BRS8 491 aaKnown RBP28.17■■■□□ 2.1
PRDM13-202ENST00000369215 MROH5Q6ZUA9 1318 aa28.17■■■□□ 2.1
PRDM13-202ENST00000369215 BRD1O95696 1058 aa28.16■■■□□ 2.1
PRDM13-202ENST00000369215 SCARF1Q14162 830 aa28.16■■■□□ 2.1
PRDM13-202ENST00000369215 TAF6LQ9Y6J9 622 aa28.16■■■□□ 2.1
PRDM13-202ENST00000369215 SLFNL1Q499Z3 407 aa28.16■■■□□ 2.1
PRDM13-202ENST00000369215 SH2B1Q9NRF2 756 aaPredicted RBP28.16■■■□□ 2.1
PRDM13-202ENST00000369215 KCNQ4P56696 695 aa28.15■■■□□ 2.1
PRDM13-202ENST00000369215 CCDC152Q4G0S7 254 aa28.15■■■□□ 2.1
PRDM13-202ENST00000369215 ZNF512BQ96KM6 892 aaPredicted RBP28.15■■■□□ 2.1
PRDM13-202ENST00000369215 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.15■■■□□ 2.1
PRDM13-202ENST00000369215 RPS6KB1P23443 525 aa28.14■■■□□ 2.1
PRDM13-202ENST00000369215 DSCC1Q9BVC3 393 aa28.14■■■□□ 2.1
PRDM13-202ENST00000369215 PANK2Q9BZ23 570 aa28.14■■■□□ 2.1
PRDM13-202ENST00000369215 RTL9Q8NET4 1388 aa28.14■■■□□ 2.1
PRDM13-202ENST00000369215 MAST3O60307 1309 aa28.14■■■□□ 2.1
PRDM13-202ENST00000369215 ZAP70P43403 619 aa28.14■■■□□ 2.1
PRDM13-202ENST00000369215 MCTP1Q6DN14 999 aa28.14■■■□□ 2.1
PRDM13-202ENST00000369215 ALDH8A1Q9H2A2 487 aaPredicted RBP28.14■■■□□ 2.1
PRDM13-202ENST00000369215 LARGE1O95461 756 aa28.13■■■□□ 2.09
PRDM13-202ENST00000369215 ZFYP08048 801 aaPredicted RBP28.13■■■□□ 2.09
PRDM13-202ENST00000369215 PUM3Q15397 648 aaKnown RBP28.13■■■□□ 2.09
PRDM13-202ENST00000369215 GJD4Q96KN9 370 aaPredicted RBP28.13■■■□□ 2.09
PRDM13-202ENST00000369215 ANKRD1Q15327 319 aa28.12■■■□□ 2.09
PRDM13-202ENST00000369215 RC3H1Q5TC82 1133 aaKnown RBP28.12■■■□□ 2.09
PRDM13-202ENST00000369215 RGL2O15211 777 aa28.12■■■□□ 2.09
PRDM13-202ENST00000369215 MPHOSPH8Q99549 860 aa28.12■■■□□ 2.09
PRDM13-202ENST00000369215 SEC31BQ9NQW1 1179 aa28.12■■■□□ 2.09
PRDM13-202ENST00000369215 GRPEL1Q9HAV7 217 aa28.11■■■□□ 2.09
PRDM13-202ENST00000369215 ARAP2Q8WZ64 1704 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms