RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 PRPHP41219 470 aa17.93■□□□□ 0.46
PRDM1-203ENST00000369096 STMN4Q9H169 189 aaPredicted RBP17.93■□□□□ 0.46
PRDM1-203ENST00000369096 EEF2P13639 858 aaKnown RBP17.93■□□□□ 0.46
PRDM1-203ENST00000369096 MAP3K9P80192 1104 aa17.93■□□□□ 0.46
PRDM1-203ENST00000369096 ZBTB3Q9H5J0 574 aa17.93■□□□□ 0.46
PRDM1-203ENST00000369096 CCDC184Q52MB2 194 aa17.92■□□□□ 0.46
PRDM1-203ENST00000369096 CCDC186Q7Z3E2 898 aa17.92■□□□□ 0.46
PRDM1-203ENST00000369096 CTAGE1Q96RT6 745 aa17.92■□□□□ 0.46
PRDM1-203ENST00000369096 HLA-DOAP06340 250 aa17.92■□□□□ 0.46
PRDM1-203ENST00000369096 ALDH1L2Q3SY69 923 aa17.92■□□□□ 0.46
PRDM1-203ENST00000369096 ARID5AQ03989 594 aa17.92■□□□□ 0.46
PRDM1-203ENST00000369096 NBPF8Q3BBV2 869 aa17.92■□□□□ 0.46
PRDM1-203ENST00000369096 CCDC61Q9Y6R9 512 aa17.92■□□□□ 0.46
PRDM1-203ENST00000369096 SMC1BQ8NDV3 1235 aa17.92■□□□□ 0.46
PRDM1-203ENST00000369096 TCHPQ9BT92 498 aa17.92■□□□□ 0.46
PRDM1-203ENST00000369096 STIM2Q9P246 746 aa17.92■□□□□ 0.46
PRDM1-203ENST00000369096 TLDC2A0PJX2 215 aa17.91■□□□□ 0.46
PRDM1-203ENST00000369096 STAT6P42226 847 aa17.91■□□□□ 0.46
PRDM1-203ENST00000369096 RPGRIP1LQ68CZ1 1315 aa17.91■□□□□ 0.46
PRDM1-203ENST00000369096 SMIM23A6NLE4 172 aa17.91■□□□□ 0.46
PRDM1-203ENST00000369096 EBAG9O00559 213 aa17.91■□□□□ 0.46
PRDM1-203ENST00000369096 RPUSD2Q8IZ73 545 aaKnown RBP17.91■□□□□ 0.46
PRDM1-203ENST00000369096 KLHL40Q2TBA0 621 aa17.91■□□□□ 0.46
PRDM1-203ENST00000369096 ANKLE2Q86XL3 938 aa17.91■□□□□ 0.46
PRDM1-203ENST00000369096 USHBP1Q8N6Y0 703 aa17.91■□□□□ 0.46
PRDM1-203ENST00000369096 BRF1Q92994 677 aa17.91■□□□□ 0.46
PRDM1-203ENST00000369096 C20orf194Q5TEA3 1177 aa17.91■□□□□ 0.46
PRDM1-203ENST00000369096 CPLX4Q7Z7G2 160 aa17.91■□□□□ 0.46
PRDM1-203ENST00000369096 ZSCAN16Q9H4T2 348 aaPredicted RBP17.91■□□□□ 0.46
PRDM1-203ENST00000369096 TXNDC16Q9P2K2 825 aa17.91■□□□□ 0.46
PRDM1-203ENST00000369096 ZEB2O60315 1214 aa17.9■□□□□ 0.46
PRDM1-203ENST00000369096 TERF1P54274 439 aa17.9■□□□□ 0.46
PRDM1-203ENST00000369096 SLC52A1Q9NWF4 448 aa17.9■□□□□ 0.46
PRDM1-203ENST00000369096 DBF4Q9UBU7 674 aaPredicted RBP17.9■□□□□ 0.46
PRDM1-203ENST00000369096 PSMA7O14818 248 aa17.9■□□□□ 0.46
PRDM1-203ENST00000369096 ZBTB9Q96C00 473 aa17.9■□□□□ 0.46
PRDM1-203ENST00000369096 IMPG2Q9BZV3 1241 aa17.9■□□□□ 0.46
PRDM1-203ENST00000369096 NUDT16Q96DE0 195 aaKnown RBP17.9■□□□□ 0.46
PRDM1-203ENST00000369096 KLF18A0A0U1RQI7 1052 aa17.9■□□□□ 0.46
PRDM1-203ENST00000369096 KIAA1107Q9UPP5 1409 aa17.89■□□□□ 0.45
PRDM1-203ENST00000369096 NOLC1Q14978 699 aaKnown RBP eCLIP17.89■□□□□ 0.45
PRDM1-203ENST00000369096 TBC1D9Q6ZT07 1266 aa17.89■□□□□ 0.45
PRDM1-203ENST00000369096 TMEM110-MUSTN1A8MSY1 372 aa17.89■□□□□ 0.45
PRDM1-203ENST00000369096 KIF5AQ12840 1032 aa17.89■□□□□ 0.45
PRDM1-203ENST00000369096 DNAJC21Q5F1R6 531 aaKnown RBP17.89■□□□□ 0.45
PRDM1-203ENST00000369096 CCDC129Q6ZRS4 1044 aa17.89■□□□□ 0.45
PRDM1-203ENST00000369096 ARHGEF11O15085 1522 aa17.89■□□□□ 0.45
PRDM1-203ENST00000369096 DISP1Q96F81 1524 aa17.89■□□□□ 0.45
PRDM1-203ENST00000369096 CTAGE9A4FU28 777 aa17.89■□□□□ 0.45
PRDM1-203ENST00000369096 SLU7O95391 586 aaKnown RBP17.89■□□□□ 0.45
PRDM1-203ENST00000369096 ASIC1P78348 528 aa17.89■□□□□ 0.45
PRDM1-203ENST00000369096 ANO6Q4KMQ2 910 aa17.89■□□□□ 0.45
PRDM1-203ENST00000369096 KIAA1524Q8TCG1 905 aa17.89■□□□□ 0.45
PRDM1-203ENST00000369096 TTC12Q9H892 705 aaPredicted RBP17.89■□□□□ 0.45
PRDM1-203ENST00000369096 CLGNO14967 610 aa17.88■□□□□ 0.45
PRDM1-203ENST00000369096 ZSCAN23Q3MJ62 389 aa17.88■□□□□ 0.45
PRDM1-203ENST00000369096 CCDC50Q8IVM0 306 aa17.88■□□□□ 0.45
PRDM1-203ENST00000369096 DPH6Q7L8W6 267 aa17.88■□□□□ 0.45
PRDM1-203ENST00000369096 NECAB1Q8N987 351 aa17.88■□□□□ 0.45
PRDM1-203ENST00000369096 EIF4G3O43432 1585 aaKnown RBP17.88■□□□□ 0.45
PRDM1-203ENST00000369096 ERBINQ96RT1 1412 aa17.88■□□□□ 0.45
PRDM1-203ENST00000369096 WTAPQ15007 396 aa17.88■□□□□ 0.45
PRDM1-203ENST00000369096 CDC5LQ99459 802 aaKnown RBP17.88■□□□□ 0.45
PRDM1-203ENST00000369096 BMP15O95972 392 aa17.88■□□□□ 0.45
PRDM1-203ENST00000369096 AMOTQ4VCS5 1084 aa17.88■□□□□ 0.45
PRDM1-203ENST00000369096 LMBR1Q8WVP7 490 aa17.88■□□□□ 0.45
PRDM1-203ENST00000369096 CCDC114Q96M63 670 aa17.88■□□□□ 0.45
PRDM1-203ENST00000369096 HMG20BQ9P0W2 317 aa17.88■□□□□ 0.45
PRDM1-203ENST00000369096 MKRN1Q9UHC7 482 aaKnown RBP17.88■□□□□ 0.45
PRDM1-203ENST00000369096 GCC2Q8IWJ2 1684 aa17.88■□□□□ 0.45
PRDM1-203ENST00000369096 MPHOSPH6Q99547 160 aaKnown RBP17.87■□□□□ 0.45
PRDM1-203ENST00000369096 SH3BP5O60239 455 aa17.87■□□□□ 0.45
PRDM1-203ENST00000369096 TSHZ3Q63HK5 1081 aa17.87■□□□□ 0.45
PRDM1-203ENST00000369096 CCDC42Q96M95 316 aa17.87■□□□□ 0.45
PRDM1-203ENST00000369096 FLIIQ13045 1269 aa17.87■□□□□ 0.45
PRDM1-203ENST00000369096 PLCD3Q8N3E9 789 aa17.87■□□□□ 0.45
PRDM1-203ENST00000369096 RPRD2Q5VT52 1461 aaKnown RBP17.87■□□□□ 0.45
PRDM1-203ENST00000369096 KRT86O43790 486 aa17.87■□□□□ 0.45
PRDM1-203ENST00000369096 ARFGAP2Q8N6H7 521 aa17.87■□□□□ 0.45
PRDM1-203ENST00000369096 CAPZA3Q96KX2 299 aa17.87■□□□□ 0.45
PRDM1-203ENST00000369096 ALG1Q9BT22 464 aa17.87■□□□□ 0.45
PRDM1-203ENST00000369096 SYT1P21579 422 aa17.86■□□□□ 0.45
PRDM1-203ENST00000369096 LRSAM1Q6UWE0 723 aa17.86■□□□□ 0.45
PRDM1-203ENST00000369096 CCDC25Q86WR0 208 aa17.86■□□□□ 0.45
PRDM1-203ENST00000369096 FAM200AQ8TCP9 573 aa17.86■□□□□ 0.45
PRDM1-203ENST00000369096 KCNG4Q8TDN1 519 aa17.86■□□□□ 0.45
PRDM1-203ENST00000369096 KCNK9Q9NPC2 374 aa17.86■□□□□ 0.45
PRDM1-203ENST00000369096 ATP6V0A2Q9Y487 856 aa17.86■□□□□ 0.45
PRDM1-203ENST00000369096 NSD3Q9BZ95 1437 aa17.86■□□□□ 0.45
PRDM1-203ENST00000369096 ZBTB43O43298 467 aa17.86■□□□□ 0.45
PRDM1-203ENST00000369096 AOPEPQ8N6M6 819 aa17.86■□□□□ 0.45
PRDM1-203ENST00000369096 CCDC110Q8TBZ0 833 aa17.86■□□□□ 0.45
PRDM1-203ENST00000369096 MRPS27Q92552 414 aaKnown RBP17.86■□□□□ 0.45
PRDM1-203ENST00000369096 ZMYND15Q9H091 742 aa17.86■□□□□ 0.45
PRDM1-203ENST00000369096 ATP5J2-PTCD1G3V325 749 aa17.86■□□□□ 0.45
PRDM1-203ENST00000369096 ZSCAN22P10073 491 aaPredicted RBP17.86■□□□□ 0.45
PRDM1-203ENST00000369096 FAM169AQ9Y6X4 670 aa17.86■□□□□ 0.45
PRDM1-203ENST00000369096 C9orf84Q5VXU9 1444 aa17.86■□□□□ 0.45
PRDM1-203ENST00000369096 KRT83P78385 493 aa17.86■□□□□ 0.45
PRDM1-203ENST00000369096 UBE3BQ7Z3V4 1068 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms