RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 MSNP26038 577 aaKnown RBP31.95■■■□□ 2.71
EFNA1-202ENST00000368407 GTF2E1P29083 439 aaPredicted RBP31.95■■■□□ 2.71
EFNA1-202ENST00000368407 MCM5P33992 734 aa31.95■■■□□ 2.71
EFNA1-202ENST00000368407 ABCC12Q96J65 1359 aa31.95■■■□□ 2.71
EFNA1-202ENST00000368407 RABL6Q3YEC7 729 aaPredicted RBP31.94■■■□□ 2.7
EFNA1-202ENST00000368407 PLA2G12BQ9BX93 195 aa31.94■■■□□ 2.7
EFNA1-202ENST00000368407 LMBR1LQ6UX01 489 aa31.94■■■□□ 2.7
EFNA1-202ENST00000368407 PSDA5PKW4 1024 aaPredicted RBP31.93■■■□□ 2.7
EFNA1-202ENST00000368407 ZNF500O60304 480 aaPredicted RBP31.93■■■□□ 2.7
EFNA1-202ENST00000368407 SRGAP3O43295 1099 aa31.92■■■□□ 2.7
EFNA1-202ENST00000368407 MTX1Q13505 466 aa31.92■■■□□ 2.7
EFNA1-202ENST00000368407 CNBD1Q8NA66 436 aa31.92■■■□□ 2.7
EFNA1-202ENST00000368407 NOL7Q9UMY1 257 aaKnown RBP31.92■■■□□ 2.7
EFNA1-202ENST00000368407 MBD3O95983 291 aa31.92■■■□□ 2.7
EFNA1-202ENST00000368407 PRR5LQ6MZQ0 368 aa31.92■■■□□ 2.7
EFNA1-202ENST00000368407 NPHP1O15259 732 aa31.91■■■□□ 2.7
EFNA1-202ENST00000368407 EPB41L2O43491 1005 aaKnown RBP31.91■■■□□ 2.7
EFNA1-202ENST00000368407 PDE8AO60658 829 aa31.91■■■□□ 2.7
EFNA1-202ENST00000368407 CAVIN1Q6NZI2 390 aaKnown RBP31.91■■■□□ 2.7
EFNA1-202ENST00000368407 CCDC85AQ96PX6 553 aaPredicted RBP31.91■■■□□ 2.7
EFNA1-202ENST00000368407 C16orf71Q8IYS4 520 aaPredicted RBP31.9■■■□□ 2.7
EFNA1-202ENST00000368407 SLC16A10Q8TF71 515 aa31.9■■■□□ 2.7
EFNA1-202ENST00000368407 CTSWP56202 376 aa31.89■■■□□ 2.7
EFNA1-202ENST00000368407 C3orf67Q6ZVT6 689 aa31.89■■■□□ 2.7
EFNA1-202ENST00000368407 SSH3Q8TE77 659 aa31.89■■■□□ 2.7
EFNA1-202ENST00000368407 CHMP3Q9Y3E7 222 aa31.89■■■□□ 2.7
EFNA1-202ENST00000368407 ANAPC15P60006 121 aa31.88■■■□□ 2.69
EFNA1-202ENST00000368407 SLC10A5Q5PT55 438 aa31.88■■■□□ 2.69
EFNA1-202ENST00000368407 ZBTB7AO95365 584 aa31.88■■■□□ 2.69
EFNA1-202ENST00000368407 CSF1RP07333 972 aa31.88■■■□□ 2.69
EFNA1-202ENST00000368407 POLA2Q14181 598 aa31.88■■■□□ 2.69
EFNA1-202ENST00000368407 LRSAM1Q6UWE0 723 aa31.88■■■□□ 2.69
EFNA1-202ENST00000368407 TTLL11Q8NHH1 800 aa31.88■■■□□ 2.69
EFNA1-202ENST00000368407 PARP3Q9Y6F1 533 aa31.88■■■□□ 2.69
EFNA1-202ENST00000368407 ZDHHC9Q9Y397 364 aa31.87■■■□□ 2.69
EFNA1-202ENST00000368407 DDX60Q8IY21 1712 aaKnown RBP31.87■■■□□ 2.69
EFNA1-202ENST00000368407 KIAA1211Q6ZU35 1233 aa31.87■■■□□ 2.69
EFNA1-202ENST00000368407 INTS4Q96HW7 963 aaKnown RBP31.87■■■□□ 2.69
EFNA1-202ENST00000368407 CUL4AQ13619 759 aa31.86■■■□□ 2.69
EFNA1-202ENST00000368407 OTUD7AQ8TE49 926 aaPredicted RBP31.86■■■□□ 2.69
EFNA1-202ENST00000368407 PDCL3Q9H2J4 239 aa31.86■■■□□ 2.69
EFNA1-202ENST00000368407 CASZ1Q86V15 1759 aa31.85■■■□□ 2.69
EFNA1-202ENST00000368407 RBSNQ9H1K0 784 aa31.85■■■□□ 2.69
EFNA1-202ENST00000368407 GPT2Q8TD30 523 aa31.85■■■□□ 2.69
EFNA1-202ENST00000368407 GREM2Q9H772 168 aa31.85■■■□□ 2.69
EFNA1-202ENST00000368407 SALL3Q9BXA9 1300 aa31.84■■■□□ 2.69
EFNA1-202ENST00000368407 HSP90B1P14625 803 aaKnown RBP31.84■■■□□ 2.69
EFNA1-202ENST00000368407 KLHDC4Q8TBB5 520 aa31.84■■■□□ 2.69
EFNA1-202ENST00000368407 PA2G4Q9UQ80 394 aaKnown RBP31.83■■■□□ 2.69
EFNA1-202ENST00000368407 RFX5P48382 616 aaPredicted RBP31.83■■■□□ 2.69
EFNA1-202ENST00000368407 PDE1AP54750 535 aa31.83■■■□□ 2.69
EFNA1-202ENST00000368407 ST5P78524 1137 aa31.83■■■□□ 2.69
EFNA1-202ENST00000368407 PKP1Q13835 747 aa31.83■■■□□ 2.69
EFNA1-202ENST00000368407 LAMB2P55268 1798 aa31.82■■■□□ 2.68
EFNA1-202ENST00000368407 KLHL34Q8N239 644 aa31.82■■■□□ 2.68
EFNA1-202ENST00000368407 ZGPATQ8N5A5 531 aaKnown RBP31.82■■■□□ 2.68
EFNA1-202ENST00000368407 ATF5Q9Y2D1 282 aaPredicted RBP31.82■■■□□ 2.68
EFNA1-202ENST00000368407 MCCP23508 829 aa31.81■■■□□ 2.68
EFNA1-202ENST00000368407 CSPP1Q1MSJ5 1256 aa31.81■■■□□ 2.68
EFNA1-202ENST00000368407 PRPF40AO75400 957 aaKnown RBP31.81■■■□□ 2.68
EFNA1-202ENST00000368407 NLRP3Q96P20 1036 aa31.81■■■□□ 2.68
EFNA1-202ENST00000368407 NRXN2Q9P2S2 1712 aa31.8■■■□□ 2.68
EFNA1-202ENST00000368407 BRD1O95696 1058 aa31.8■■■□□ 2.68
EFNA1-202ENST00000368407 MTFR1LQ9H019 292 aa31.8■■■□□ 2.68
EFNA1-202ENST00000368407 EXOC6BQ9Y2D4 811 aa31.8■■■□□ 2.68
EFNA1-202ENST00000368407 TNRC6CQ9HCJ0 1690 aaKnown RBP31.8■■■□□ 2.68
EFNA1-202ENST00000368407 AOX1Q06278 1338 aa31.8■■■□□ 2.68
EFNA1-202ENST00000368407 NCLP19338 710 aaKnown RBP31.79■■■□□ 2.68
EFNA1-202ENST00000368407 SF3B3Q15393 1217 aaKnown RBP31.79■■■□□ 2.68
EFNA1-202ENST00000368407 MAP7D2Q96T17 732 aa31.79■■■□□ 2.68
EFNA1-202ENST00000368407 MYH3P11055 1940 aa31.79■■■□□ 2.68
EFNA1-202ENST00000368407 ITGA6P23229 1130 aa31.79■■■□□ 2.68
EFNA1-202ENST00000368407 PTPN12Q05209 780 aaKnown RBP31.79■■■□□ 2.68
EFNA1-202ENST00000368407 CCDC57Q2TAC2 916 aa31.79■■■□□ 2.68
EFNA1-202ENST00000368407 CCDC152Q4G0S7 254 aa31.79■■■□□ 2.68
EFNA1-202ENST00000368407 ZKSCAN5Q9Y2L8 839 aa31.79■■■□□ 2.68
EFNA1-202ENST00000368407 ZNF594Q96JF6 807 aaPredicted RBP31.78■■■□□ 2.68
EFNA1-202ENST00000368407 SURF6O75683 361 aaKnown RBP31.77■■■□□ 2.68
EFNA1-202ENST00000368407 IFIT5Q13325 482 aaKnown RBP31.77■■■□□ 2.68
EFNA1-202ENST00000368407 SEC31BQ9NQW1 1179 aa31.77■■■□□ 2.68
EFNA1-202ENST00000368407 CCDC39Q9UFE4 941 aa31.77■■■□□ 2.68
EFNA1-202ENST00000368407 SMARCA5O60264 1052 aaPredicted RBP31.77■■■□□ 2.68
EFNA1-202ENST00000368407 SIL1Q9H173 461 aa31.77■■■□□ 2.68
EFNA1-202ENST00000368407 RIC1Q4ADV7 1423 aa31.76■■■□□ 2.68
EFNA1-202ENST00000368407 SYAP1Q96A49 352 aaPredicted RBP31.76■■■□□ 2.67
EFNA1-202ENST00000368407 TMX3Q96JJ7 454 aa31.76■■■□□ 2.67
EFNA1-202ENST00000368407 ESYT1Q9BSJ8 1104 aa31.76■■■□□ 2.67
EFNA1-202ENST00000368407 APBB1O00213 710 aa31.75■■■□□ 2.67
EFNA1-202ENST00000368407 COPRSQ9NQ92 184 aa31.75■■■□□ 2.67
EFNA1-202ENST00000368407 TMEM63CQ9P1W3 806 aa31.75■■■□□ 2.67
EFNA1-202ENST00000368407 BRIP1Q9BX63 1249 aa31.74■■■□□ 2.67
EFNA1-202ENST00000368407 STAP2Q9UGK3 403 aa31.74■■■□□ 2.67
EFNA1-202ENST00000368407 ANKRD18BA2A2Z9 1011 aa31.73■■■□□ 2.67
EFNA1-202ENST00000368407 EIF2AK3Q9NZJ5 1116 aaKnown RBP31.73■■■□□ 2.67
EFNA1-202ENST00000368407 RTL9Q8NET4 1388 aa31.73■■■□□ 2.67
EFNA1-202ENST00000368407 CRY2Q49AN0 593 aa31.71■■■□□ 2.67
EFNA1-202ENST00000368407 COL4A1P02462 1669 aa31.71■■■□□ 2.67
EFNA1-202ENST00000368407 NEK4P51957 841 aa31.71■■■□□ 2.67
EFNA1-202ENST00000368407 TAF7LQ5H9L4 462 aa31.71■■■□□ 2.67
EFNA1-202ENST00000368407 PUS3Q9BZE2 481 aaKnown RBP31.71■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms