RNA–Protein interactions for RNA: ENST00000368262.7

CCT3-206, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 2,048 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-206ENST00000368262 IFFO2Q5TF58 517 aa16.45■□□□□ 0.22
CCT3-206ENST00000368262 KAZALD1Q96I82 304 aa16.45■□□□□ 0.22
CCT3-206ENST00000368262 TIGD1Q96MW7 591 aa16.45■□□□□ 0.22
CCT3-206ENST00000368262 NEK1Q96PY6 1258 aa16.45■□□□□ 0.22
CCT3-206ENST00000368262 C9orf78Q9NZ63 289 aaPredicted RBP16.45■□□□□ 0.22
CCT3-206ENST00000368262 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.45■□□□□ 0.229e-7■□□□□ 10.3
CCT3-206ENST00000368262 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.45■□□□□ 0.22
CCT3-206ENST00000368262 V9GYY5 206 aaPredicted RBP16.45■□□□□ 0.22
CCT3-206ENST00000368262 G3BP1Q13283 466 aaKnown RBP eCLIP16.45■□□□□ 0.222e-7■■■□□ 19.2
CCT3-206ENST00000368262 E4F1Q66K89 784 aaPredicted RBP16.45■□□□□ 0.22
CCT3-206ENST00000368262 MAP3K2Q9Y2U5 619 aa16.45■□□□□ 0.22
CCT3-206ENST00000368262 KINO60870 393 aaKnown RBP16.44■□□□□ 0.22
CCT3-206ENST00000368262 SLC20A2Q08357 652 aa16.44■□□□□ 0.22
CCT3-206ENST00000368262 FILIP1Q7Z7B0 1213 aa16.44■□□□□ 0.22
CCT3-206ENST00000368262 ZNF396Q96N95 335 aaPredicted RBP16.44■□□□□ 0.22
CCT3-206ENST00000368262 NAT10Q9H0A0 1025 aaKnown RBP16.44■□□□□ 0.22
CCT3-206ENST00000368262 TRMT1Q9NXH9 659 aaKnown RBP16.44■□□□□ 0.22
CCT3-206ENST00000368262 TLR7Q9NYK1 1049 aaKnown RBP16.44■□□□□ 0.22
CCT3-206ENST00000368262 FHOD1Q9Y613 1164 aa16.44■□□□□ 0.22
CCT3-206ENST00000368262 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
CCT3-206ENST00000368262 CYP2C19P33261 490 aa16.43■□□□□ 0.22
CCT3-206ENST00000368262 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
CCT3-206ENST00000368262 AEBP2Q6ZN18 517 aaPredicted RBP16.43■□□□□ 0.22
CCT3-206ENST00000368262 Q6ZUG5 572 aa16.43■□□□□ 0.22
CCT3-206ENST00000368262 AOPEPQ8N6M6 819 aa16.43■□□□□ 0.22
CCT3-206ENST00000368262 NSUN7Q8NE18 718 aaKnown RBP16.43■□□□□ 0.22
CCT3-206ENST00000368262 SUCLG2Q96I99 432 aa16.43■□□□□ 0.22
CCT3-206ENST00000368262 PPP1R13BQ96KQ4 1090 aa16.43■□□□□ 0.22
CCT3-206ENST00000368262 CCDC8Q9H0W5 538 aaPredicted RBP16.43■□□□□ 0.22
CCT3-206ENST00000368262 RGPD2P0DJD1 1756 aa16.43■□□□□ 0.22
CCT3-206ENST00000368262 TULP2O00295 520 aa16.43■□□□□ 0.22
CCT3-206ENST00000368262 SCRN1Q12765 414 aa16.43■□□□□ 0.22
CCT3-206ENST00000368262 NGDNQ8NEJ9 315 aaKnown RBP16.43■□□□□ 0.22
CCT3-206ENST00000368262 LINS1Q8NG48 757 aa16.43■□□□□ 0.22
CCT3-206ENST00000368262 BBXQ8WY36 941 aaPredicted RBP16.43■□□□□ 0.22
CCT3-206ENST00000368262 BOLA2Q9H3K6 86 aa16.43■□□□□ 0.22
CCT3-206ENST00000368262 ADAMTS7Q9UKP4 1686 aa16.42■□□□□ 0.22
CCT3-206ENST00000368262 GRM8O00222 908 aa16.42■□□□□ 0.22
CCT3-206ENST00000368262 KCNQ3O43525 872 aa16.42■□□□□ 0.22
CCT3-206ENST00000368262 NLRP6P59044 892 aa16.42■□□□□ 0.22
CCT3-206ENST00000368262 DDX11Q96FC9 970 aa16.42■□□□□ 0.22
CCT3-206ENST00000368262 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.42■□□□□ 0.223e-8■■■□□ 14.7
CCT3-206ENST00000368262 LMTK3Q96Q04 1460 aa16.42■□□□□ 0.22
CCT3-206ENST00000368262 SALL1Q9NSC2 1324 aa16.42■□□□□ 0.22
CCT3-206ENST00000368262 ZNF609O15014 1411 aa16.42■□□□□ 0.22
CCT3-206ENST00000368262 A0A1W2PQ27 194 aa16.41■□□□□ 0.22
CCT3-206ENST00000368262 A0A1W2PQ64 194 aa16.41■□□□□ 0.22
CCT3-206ENST00000368262 A0A1W2PQD8 194 aa16.41■□□□□ 0.22
CCT3-206ENST00000368262 ZRANB2O95218 330 aaKnown RBP eCLIP16.41■□□□□ 0.22
CCT3-206ENST00000368262 ANXA1P04083 346 aa16.41■□□□□ 0.22
CCT3-206ENST00000368262 IRX5P78411 483 aaPredicted RBP16.41■□□□□ 0.22
CCT3-206ENST00000368262 FMR1NBQ8N0W7 255 aaPredicted RBP16.41■□□□□ 0.22
CCT3-206ENST00000368262 USP28Q96RU2 1077 aa16.41■□□□□ 0.22
CCT3-206ENST00000368262 LGR6Q9HBX8 967 aa16.41■□□□□ 0.22
CCT3-206ENST00000368262 NFAT5O94916 1531 aa16.41■□□□□ 0.22
CCT3-206ENST00000368262 PHLPP2Q6ZVD8 1323 aa16.41■□□□□ 0.22
CCT3-206ENST00000368262 ATP5JP18859 108 aa16.41■□□□□ 0.22
CCT3-206ENST00000368262 CLCN6P51797 869 aa16.41■□□□□ 0.22
CCT3-206ENST00000368262 ARMCX5Q6P1M9 558 aa16.41■□□□□ 0.22
CCT3-206ENST00000368262 FSIP1Q8NA03 581 aa16.41■□□□□ 0.22
CCT3-206ENST00000368262 NOL10Q9BSC4 688 aaKnown RBP16.41■□□□□ 0.22
CCT3-206ENST00000368262 AGXT2Q9BYV1 514 aa16.41■□□□□ 0.22
CCT3-206ENST00000368262 CTDNEP1O95476 244 aa16.4■□□□□ 0.22
CCT3-206ENST00000368262 ERCC6LQ2NKX8 1250 aa16.4■□□□□ 0.22
CCT3-206ENST00000368262 BICC1Q9H694 974 aaKnown RBP16.4■□□□□ 0.22
CCT3-206ENST00000368262 ST7Q9NRC1 585 aa16.4■□□□□ 0.22
CCT3-206ENST00000368262 HMGB1P09429 215 aaKnown RBP16.4■□□□□ 0.22
CCT3-206ENST00000368262 PNMA6AP0CW24 399 aaPredicted RBP16.4■□□□□ 0.22
CCT3-206ENST00000368262 NEDD4P46934 1319 aa16.39■□□□□ 0.22
CCT3-206ENST00000368262 CCP110O43303 1012 aa16.39■□□□□ 0.21
CCT3-206ENST00000368262 CYP21A2P08686 494 aa16.39■□□□□ 0.21
CCT3-206ENST00000368262 HSP90B1P14625 803 aaKnown RBP16.39■□□□□ 0.21
CCT3-206ENST00000368262 PLA2G4AP47712 749 aa16.39■□□□□ 0.21
CCT3-206ENST00000368262 CWF19L2Q2TBE0 894 aaKnown RBP16.39■□□□□ 0.21
CCT3-206ENST00000368262 ILDR1Q86SU0 546 aaPredicted RBP16.39■□□□□ 0.21
CCT3-206ENST00000368262 MRPS27Q92552 414 aaKnown RBP16.39■□□□□ 0.21
CCT3-206ENST00000368262 UBXN6Q9BZV1 441 aa16.39■□□□□ 0.21
CCT3-206ENST00000368262 FTOQ9C0B1 505 aaKnown RBP eCLIP16.39■□□□□ 0.21
CCT3-206ENST00000368262 DDX60Q8IY21 1712 aaKnown RBP16.39■□□□□ 0.21
CCT3-206ENST00000368262 PTPDC1A2A3K4 754 aa16.38■□□□□ 0.21
CCT3-206ENST00000368262 ATP8B1O43520 1251 aa16.38■□□□□ 0.21
CCT3-206ENST00000368262 AKAP4Q5JQC9 854 aa16.38■□□□□ 0.21
CCT3-206ENST00000368262 SYT10Q6XYQ8 523 aa16.38■□□□□ 0.21
CCT3-206ENST00000368262 RTEL1Q9NZ71 1219 aa16.38■□□□□ 0.21
CCT3-206ENST00000368262 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.38■□□□□ 0.21
CCT3-206ENST00000368262 CAMTA1Q9Y6Y1 1673 aa16.38■□□□□ 0.21
CCT3-206ENST00000368262 BTBD11A6QL63 1104 aa16.38■□□□□ 0.21
CCT3-206ENST00000368262 CEBPZQ03701 1054 aaKnown RBP16.38■□□□□ 0.21
CCT3-206ENST00000368262 PROSER3Q2NL68 480 aa16.38■□□□□ 0.21
CCT3-206ENST00000368262 ADALQ6DHV7 355 aa16.38■□□□□ 0.21
CCT3-206ENST00000368262 USHBP1Q8N6Y0 703 aa16.38■□□□□ 0.21
CCT3-206ENST00000368262 LRRN4CLQ8ND94 238 aa16.38■□□□□ 0.21
CCT3-206ENST00000368262 SRRTQ9BXP5 876 aaKnown RBP16.38■□□□□ 0.21
CCT3-206ENST00000368262 XPO4Q9C0E2 1151 aaKnown RBP16.38■□□□□ 0.21
CCT3-206ENST00000368262 ORC3Q9UBD5 711 aaPredicted RBP16.38■□□□□ 0.21
CCT3-206ENST00000368262 SH3TC1Q8TE82 1336 aa16.37■□□□□ 0.21
CCT3-206ENST00000368262 NRDCO43847 1150 aa16.37■□□□□ 0.21
CCT3-206ENST00000368262 SFPQP23246 707 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCT3-206ENST00000368262 LTKP29376 864 aa16.37■□□□□ 0.21
CCT3-206ENST00000368262 ETF1P62495 437 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms