RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 CCDC171Q6TFL3 1326 aa14.26□□□□□ -0.13
PTPRK-203ENST00000368207 ITGA6P23229 1130 aa14.26□□□□□ -0.13
PTPRK-203ENST00000368207 EIF5P55010 431 aaKnown RBP14.26□□□□□ -0.13
PTPRK-203ENST00000368207 APOBRQ0VD83 1088 aa14.26□□□□□ -0.13
PTPRK-203ENST00000368207 NOM1Q5C9Z4 860 aaKnown RBP14.26□□□□□ -0.13
PTPRK-203ENST00000368207 ZNF771Q7L3S4 317 aaPredicted RBP14.26□□□□□ -0.13
PTPRK-203ENST00000368207 CCDC191Q8NCU4 936 aa14.26□□□□□ -0.13
PTPRK-203ENST00000368207 USP44Q9H0E7 712 aa14.26□□□□□ -0.13
PTPRK-203ENST00000368207 USP48Q86UV5 1035 aa14.25□□□□□ -0.13
PTPRK-203ENST00000368207 KRT23Q9C075 422 aa14.25□□□□□ -0.13
PTPRK-203ENST00000368207 SH3TC1Q8TE82 1336 aa14.25□□□□□ -0.13
PTPRK-203ENST00000368207 KIAA0232Q92628 1395 aa14.25□□□□□ -0.13
PTPRK-203ENST00000368207 PLEKHG1Q9ULL1 1385 aa14.25□□□□□ -0.13
PTPRK-203ENST00000368207 ZNF165P49910 485 aa14.25□□□□□ -0.13
PTPRK-203ENST00000368207 ZSCAN16Q9H4T2 348 aaPredicted RBP14.25□□□□□ -0.13
PTPRK-203ENST00000368207 CTAGE5O15320 804 aa14.25□□□□□ -0.13
PTPRK-203ENST00000368207 FAM98CQ17RN3 349 aaKnown RBP14.25□□□□□ -0.13
PTPRK-203ENST00000368207 RUFY1Q96T51 708 aa14.25□□□□□ -0.13
PTPRK-203ENST00000368207 TFCP2L1Q9NZI6 479 aa14.25□□□□□ -0.13
PTPRK-203ENST00000368207 DTNBO60941 627 aa14.24□□□□□ -0.13
PTPRK-203ENST00000368207 SFPQP23246 707 aaKnown RBP eCLIP14.24□□□□□ -0.134e-7■□□□□ 11
PTPRK-203ENST00000368207 ZSCAN23Q3MJ62 389 aa14.24□□□□□ -0.13
PTPRK-203ENST00000368207 FAM227BQ96M60 508 aa14.24□□□□□ -0.13
PTPRK-203ENST00000368207 TMEM94Q12767 1356 aa14.24□□□□□ -0.13
PTPRK-203ENST00000368207 IFIT1BQ5T764 474 aaKnown RBP14.24□□□□□ -0.13
PTPRK-203ENST00000368207 NYXQ9GZU5 481 aa14.24□□□□□ -0.13
PTPRK-203ENST00000368207 SYCP1Q15431 976 aa14.24□□□□□ -0.13
PTPRK-203ENST00000368207 RTN1Q16799 776 aa14.24□□□□□ -0.13
PTPRK-203ENST00000368207 ABCC4O15439 1325 aa14.24□□□□□ -0.13
PTPRK-203ENST00000368207 F13A1P00488 732 aa14.23□□□□□ -0.13
PTPRK-203ENST00000368207 PHKG2P15735 406 aa14.23□□□□□ -0.13
PTPRK-203ENST00000368207 RXRAP19793 462 aa14.23□□□□□ -0.13
PTPRK-203ENST00000368207 CCDC24Q8N4L8 307 aa14.23□□□□□ -0.13
PTPRK-203ENST00000368207 FAM135BQ49AJ0 1406 aa14.23□□□□□ -0.13
PTPRK-203ENST00000368207 TNNT3P45378 269 aaPredicted RBP14.23□□□□□ -0.13
PTPRK-203ENST00000368207 HSP90B2PQ58FF3 399 aa14.23□□□□□ -0.13
PTPRK-203ENST00000368207 VSIG10Q8N0Z9 540 aa14.23□□□□□ -0.13
PTPRK-203ENST00000368207 PDCL3Q9H2J4 239 aa14.23□□□□□ -0.13
PTPRK-203ENST00000368207 CNNM2Q9H8M5 875 aa14.23□□□□□ -0.13
PTPRK-203ENST00000368207 MAGEB6P1A0A0J9YX57 407 aa14.23□□□□□ -0.13
PTPRK-203ENST00000368207 HLA-DOAP06340 250 aa14.23□□□□□ -0.13
PTPRK-203ENST00000368207 TSPY3P0CV98 308 aa14.23□□□□□ -0.13
PTPRK-203ENST00000368207 TSPY8P0CW00 308 aa14.23□□□□□ -0.13
PTPRK-203ENST00000368207 RBM25P49756 843 aaKnown RBP14.23□□□□□ -0.13
PTPRK-203ENST00000368207 PICALMQ13492 652 aa14.23□□□□□ -0.13
PTPRK-203ENST00000368207 CDC42BPAQ5VT25 1732 aa14.23□□□□□ -0.13
PTPRK-203ENST00000368207 HECW2Q9P2P5 1572 aa14.23□□□□□ -0.13
PTPRK-203ENST00000368207 DHX32Q7L7V1 743 aaKnown RBP14.22□□□□□ -0.13
PTPRK-203ENST00000368207 GSTO1P78417 241 aa14.22□□□□□ -0.13
PTPRK-203ENST00000368207 TRMT1LQ7Z2T5 733 aaKnown RBP14.22□□□□□ -0.13
PTPRK-203ENST00000368207 FEZ1Q99689 392 aa14.22□□□□□ -0.13
PTPRK-203ENST00000368207 CLIP2Q9UDT6 1046 aa14.22□□□□□ -0.13
PTPRK-203ENST00000368207 RUFY3Q7L099 469 aa14.22□□□□□ -0.13
PTPRK-203ENST00000368207 TRMT2AQ8IZ69 625 aaKnown RBP14.22□□□□□ -0.13
PTPRK-203ENST00000368207 CCNL1Q9UK58 526 aaPredicted RBP14.22□□□□□ -0.13
PTPRK-203ENST00000368207 ZC3H12CQ9C0D7 883 aaKnown RBP14.22□□□□□ -0.13
PTPRK-203ENST00000368207 MARCKSP29966 332 aaPredicted RBP14.21□□□□□ -0.13
PTPRK-203ENST00000368207 UBA7P41226 1012 aa14.21□□□□□ -0.13
PTPRK-203ENST00000368207 RAD50Q92878 1312 aa14.21□□□□□ -0.13
PTPRK-203ENST00000368207 MBD4O95243 580 aa14.21□□□□□ -0.13
PTPRK-203ENST00000368207 IDEP14735 1019 aa14.21□□□□□ -0.13
PTPRK-203ENST00000368207 RAB3GAP1Q15042 981 aa14.21□□□□□ -0.13
PTPRK-203ENST00000368207 TEX35Q5T0J7 233 aa14.21□□□□□ -0.13
PTPRK-203ENST00000368207 TMTC2Q8N394 836 aa14.21□□□□□ -0.13
PTPRK-203ENST00000368207 EDC3Q96F86 508 aaKnown RBP14.21□□□□□ -0.13
PTPRK-203ENST00000368207 XAGE2Q96GT9 111 aa14.21□□□□□ -0.13
PTPRK-203ENST00000368207 RAB34Q9BZG1 259 aa14.21□□□□□ -0.13
PTPRK-203ENST00000368207 UBA5Q9GZZ9 404 aa14.21□□□□□ -0.13
PTPRK-203ENST00000368207 MCM9Q9NXL9 1143 aa14.21□□□□□ -0.13
PTPRK-203ENST00000368207 DACT1Q9NYF0 836 aa14.21□□□□□ -0.13
PTPRK-203ENST00000368207 AATKQ6ZMQ8 1374 aa14.21□□□□□ -0.13
PTPRK-203ENST00000368207 NLRP1Q9C000 1473 aa14.21□□□□□ -0.13
PTPRK-203ENST00000368207 NEURL1BA8MQ27 555 aa14.21□□□□□ -0.13
PTPRK-203ENST00000368207 TAF5LO75529 589 aa14.21□□□□□ -0.13
PTPRK-203ENST00000368207 TMEM266Q2M3C6 531 aa14.21□□□□□ -0.13
PTPRK-203ENST00000368207 ZNF521Q96K83 1311 aa14.21□□□□□ -0.14
PTPRK-203ENST00000368207 SGSM2O43147 1006 aa14.21□□□□□ -0.14
PTPRK-203ENST00000368207 EPB41L2O43491 1005 aaKnown RBP14.21□□□□□ -0.14
PTPRK-203ENST00000368207 ADCY5O95622 1261 aa14.21□□□□□ -0.14
PTPRK-203ENST00000368207 ARHGEF25Q86VW2 580 aa14.21□□□□□ -0.14
PTPRK-203ENST00000368207 CDCA7Q9BWT1 371 aaPredicted RBP14.21□□□□□ -0.14
PTPRK-203ENST00000368207 RTL1A6NKG5 1358 aa14.2□□□□□ -0.14
PTPRK-203ENST00000368207 RIMBP2O15034 1052 aa14.2□□□□□ -0.14
PTPRK-203ENST00000368207 CCDC102BQ68D86 513 aa14.2□□□□□ -0.14
PTPRK-203ENST00000368207 CPLX3Q8WVH0 158 aa14.2□□□□□ -0.14
PTPRK-203ENST00000368207 TTLL7Q6ZT98 887 aa14.2□□□□□ -0.14
PTPRK-203ENST00000368207 ZKSCAN3Q9BRR0 538 aa14.2□□□□□ -0.14
PTPRK-203ENST00000368207 ABCC3O15438 1527 aa14.2□□□□□ -0.14
PTPRK-203ENST00000368207 PTPDC1A2A3K4 754 aa14.2□□□□□ -0.14
PTPRK-203ENST00000368207 PDE8AO60658 829 aa14.2□□□□□ -0.14
PTPRK-203ENST00000368207 TOP1P11387 765 aaKnown RBP14.2□□□□□ -0.14
PTPRK-203ENST00000368207 TRAPPC3LQ5T215 181 aa14.2□□□□□ -0.14
PTPRK-203ENST00000368207 ZNF804AQ7Z570 1209 aa14.2□□□□□ -0.14
PTPRK-203ENST00000368207 CABP5Q9NP86 173 aa14.2□□□□□ -0.14
PTPRK-203ENST00000368207 TCP11L1Q9NUJ3 509 aa14.2□□□□□ -0.14
PTPRK-203ENST00000368207 USP6P35125 1406 aa14.2□□□□□ -0.14
PTPRK-203ENST00000368207 SYT1P21579 422 aa14.19□□□□□ -0.14
PTPRK-203ENST00000368207 STX1AQ16623 288 aa14.19□□□□□ -0.14
PTPRK-203ENST00000368207 ARHGAP29Q52LW3 1261 aa14.19□□□□□ -0.14
PTPRK-203ENST00000368207 CCDC12Q8WUD4 166 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms