RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 CPLX3Q8WVH0 158 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 NBPF4Q96M43 638 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 ERCC6L2Q5T890 1561 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 CFAP74Q9C0B2 1584 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 ZBTB43O43298 467 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 CASQ1P31415 396 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 AXDND1Q5T1B0 1012 aaPredicted RBP13.51□□□□□ -0.25
COPA-202ENST00000368069 GAS2L3Q86XJ1 694 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 IL17REQ8NFR9 667 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 TMX1Q9H3N1 280 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 ZHX3Q9H4I2 956 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 PAXBP1Q9Y5B6 917 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 ATP7BP35670 1465 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 MLH3Q9UHC1 1453 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 NOM1Q5C9Z4 860 aaKnown RBP13.51□□□□□ -0.25
COPA-202ENST00000368069 SIRT1Q96EB6 747 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 METP08581 1390 aa13.5□□□□□ -0.25
COPA-202ENST00000368069 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
COPA-202ENST00000368069 EIF3JO75822 258 aaKnown RBP13.5□□□□□ -0.25
COPA-202ENST00000368069 UQCRFS1P1P0C7P4 283 aa13.5□□□□□ -0.25
COPA-202ENST00000368069 ZNF853P0CG23 659 aa13.5□□□□□ -0.25
COPA-202ENST00000368069 MARCKSP29966 332 aaPredicted RBP13.5□□□□□ -0.25
COPA-202ENST00000368069 SSH3Q8TE77 659 aa13.5□□□□□ -0.25
COPA-202ENST00000368069 ERICH4A6NGS2 130 aa13.5□□□□□ -0.25
COPA-202ENST00000368069 SSBP05455 408 aaKnown RBP eCLIP13.5□□□□□ -0.25
COPA-202ENST00000368069 ZNF790Q6PG37 636 aa13.5□□□□□ -0.25
COPA-202ENST00000368069 CATIPQ7Z7H3 387 aa13.5□□□□□ -0.25
COPA-202ENST00000368069 SIRT2Q8IXJ6 389 aa13.5□□□□□ -0.25
COPA-202ENST00000368069 DCAF5Q96JK2 942 aa13.5□□□□□ -0.25
COPA-202ENST00000368069 EFCAB6Q5THR3 1501 aa13.5□□□□□ -0.25
COPA-202ENST00000368069 SLC9C2Q5TAH2 1124 aa13.5□□□□□ -0.25
COPA-202ENST00000368069 MADDQ8WXG6 1647 aa13.5□□□□□ -0.25
COPA-202ENST00000368069 USP5P45974 858 aa13.49□□□□□ -0.25
COPA-202ENST00000368069 TNNI3KQ59H18 835 aa13.49□□□□□ -0.25
COPA-202ENST00000368069 KIAA1328Q86T90 577 aa13.49□□□□□ -0.25
COPA-202ENST00000368069 DBNDD2Q9BQY9 259 aa13.49□□□□□ -0.25
COPA-202ENST00000368069 FPGT-TNNI3KV9GXZ4 949 aa13.49□□□□□ -0.25
COPA-202ENST00000368069 SPTLC2O15270 562 aa13.49□□□□□ -0.25
COPA-202ENST00000368069 KIF5CO60282 957 aa13.49□□□□□ -0.25
COPA-202ENST00000368069 CCDC181Q5TID7 509 aa13.49□□□□□ -0.25
COPA-202ENST00000368069 CHAMP1Q96JM3 812 aa13.49□□□□□ -0.25
COPA-202ENST00000368069 METTL22Q9BUU2 404 aaPredicted RBP13.49□□□□□ -0.25
COPA-202ENST00000368069 KIF4BQ2VIQ3 1234 aa13.49□□□□□ -0.25
COPA-202ENST00000368069 MKNK2Q9HBH9 465 aa13.49□□□□□ -0.25
COPA-202ENST00000368069 IBTKQ9P2D0 1353 aaPredicted RBP13.48□□□□□ -0.25
COPA-202ENST00000368069 EXOC5O00471 708 aa13.48□□□□□ -0.25
COPA-202ENST00000368069 LTKP29376 864 aa13.48□□□□□ -0.25
COPA-202ENST00000368069 NLRP5P59047 1200 aa13.48□□□□□ -0.25
COPA-202ENST00000368069 FSD2A1L4K1 749 aa13.48□□□□□ -0.25
COPA-202ENST00000368069 KCNQ3O43525 872 aa13.48□□□□□ -0.25
COPA-202ENST00000368069 UBASH3AP57075 661 aa13.48□□□□□ -0.25
COPA-202ENST00000368069 SSH2Q76I76 1423 aa13.48□□□□□ -0.25
COPA-202ENST00000368069 CDR1P51861 262 aa13.48□□□□□ -0.25
COPA-202ENST00000368069 TIMM10P62072 90 aa13.48□□□□□ -0.25
COPA-202ENST00000368069 WTAPQ15007 396 aa13.48□□□□□ -0.25
COPA-202ENST00000368069 DZIP1Q86YF9 867 aaKnown RBP13.48□□□□□ -0.25
COPA-202ENST00000368069 LUC7LQ9NQ29 371 aaKnown RBP13.47□□□□□ -0.25
COPA-202ENST00000368069 HSP90AA4PQ58FG1 418 aa13.47□□□□□ -0.25
COPA-202ENST00000368069 NDUFB9Q9Y6M9 179 aa13.47□□□□□ -0.25
COPA-202ENST00000368069 SPHKAPQ2M3C7 1700 aa13.47□□□□□ -0.25
COPA-202ENST00000368069 SKIDA1Q1XH10 827 aa13.47□□□□□ -0.25
COPA-202ENST00000368069 CCDC102AQ96A19 550 aa13.47□□□□□ -0.25
COPA-202ENST00000368069 PHF23Q9BUL5 403 aaPredicted RBP13.47□□□□□ -0.25
COPA-202ENST00000368069 CT47A1Q5JQC4 288 aaPredicted RBP13.46□□□□□ -0.25
COPA-202ENST00000368069 CDC42BPBQ9Y5S2 1711 aa13.46□□□□□ -0.25
COPA-202ENST00000368069 GPT2Q8TD30 523 aa13.46□□□□□ -0.25
COPA-202ENST00000368069 ORAI2Q96SN7 254 aa13.46□□□□□ -0.25
COPA-202ENST00000368069 NUP88Q99567 741 aaPredicted RBP13.46□□□□□ -0.25
COPA-202ENST00000368069 HELLSQ9NRZ9 838 aa13.46□□□□□ -0.25
COPA-202ENST00000368069 CCDC194A0A1B0GVG4 234 aa13.46□□□□□ -0.25
COPA-202ENST00000368069 LMOD1P29536 600 aaPredicted RBP13.46□□□□□ -0.25
COPA-202ENST00000368069 CDC37L1Q7L3B6 337 aa13.46□□□□□ -0.25
COPA-202ENST00000368069 KRT23Q9C075 422 aa13.46□□□□□ -0.25
COPA-202ENST00000368069 BMP2KQ9NSY1 1161 aaPredicted RBP13.46□□□□□ -0.25
COPA-202ENST00000368069 RTN1Q16799 776 aa13.46□□□□□ -0.26
COPA-202ENST00000368069 CCDC148Q8NFR7 591 aa13.46□□□□□ -0.26
COPA-202ENST00000368069 ABCC3O15438 1527 aa13.46□□□□□ -0.26
COPA-202ENST00000368069 FAM193AP78312 1265 aa13.45□□□□□ -0.26
COPA-202ENST00000368069 KANK3Q6NY19 840 aa13.45□□□□□ -0.26
COPA-202ENST00000368069 CDC5LQ99459 802 aaKnown RBP13.45□□□□□ -0.26
COPA-202ENST00000368069 PTH1RQ03431 593 aa13.45□□□□□ -0.26
COPA-202ENST00000368069 GCKRQ14397 625 aa13.45□□□□□ -0.26
COPA-202ENST00000368069 IQSEC3Q9UPP2 1182 aaPredicted RBP13.45□□□□□ -0.26
COPA-202ENST00000368069 SLC4A4Q9Y6R1 1079 aa13.45□□□□□ -0.26
COPA-202ENST00000368069 HECW2Q9P2P5 1572 aa13.45□□□□□ -0.26
COPA-202ENST00000368069 UNC5CLQ8IV45 518 aa13.45□□□□□ -0.26
COPA-202ENST00000368069 C17orf53Q8N3J3 647 aaPredicted RBP13.45□□□□□ -0.26
COPA-202ENST00000368069 C19orf44Q9H6X5 657 aa13.45□□□□□ -0.26
COPA-202ENST00000368069 SEC63Q9UGP8 760 aaKnown RBP13.45□□□□□ -0.26
COPA-202ENST00000368069 ADAMTS2O95450 1211 aa13.45□□□□□ -0.26
COPA-202ENST00000368069 GNG11P61952 73 aa13.45□□□□□ -0.26
COPA-202ENST00000368069 PTCH1Q13635 1447 aa13.45□□□□□ -0.26
COPA-202ENST00000368069 TXLNBQ8N3L3 684 aa13.45□□□□□ -0.26
COPA-202ENST00000368069 PLBD2Q8NHP8 589 aa13.45□□□□□ -0.26
COPA-202ENST00000368069 UBE2Q2Q8WVN8 375 aa13.45□□□□□ -0.26
COPA-202ENST00000368069 TM6SF1Q9BZW5 370 aa13.45□□□□□ -0.26
COPA-202ENST00000368069 OSBPL3Q9H4L5 887 aa13.45□□□□□ -0.26
COPA-202ENST00000368069 A0A1B0GUL7 405 aa13.44□□□□□ -0.26
COPA-202ENST00000368069 ME3Q16798 604 aa13.44□□□□□ -0.26
COPA-202ENST00000368069 LEO1Q8WVC0 666 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms