RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 SLC10A3P09131 477 aa10.54□□□□□ -0.72
MRPL55-211ENST00000366738 TAF1P21675 1872 aa10.54□□□□□ -0.72
MRPL55-211ENST00000366738 AIMP1Q12904 312 aaKnown RBP10.54□□□□□ -0.72
MRPL55-211ENST00000366738 PARP10Q53GL7 1025 aa10.54□□□□□ -0.72
MRPL55-211ENST00000366738 DUSP27Q5VZP5 1158 aa10.54□□□□□ -0.72
MRPL55-211ENST00000366738 NLRP10Q86W26 655 aa10.54□□□□□ -0.72
MRPL55-211ENST00000366738 MPNDQ8N594 471 aa10.54□□□□□ -0.72
MRPL55-211ENST00000366738 CCDC102AQ96A19 550 aa10.54□□□□□ -0.72
MRPL55-211ENST00000366738 NLRP3Q96P20 1036 aa10.54□□□□□ -0.72
MRPL55-211ENST00000366738 E9PSI1 815 aa10.53□□□□□ -0.72
MRPL55-211ENST00000366738 HCLS1P14317 486 aaPredicted RBP10.53□□□□□ -0.72
MRPL55-211ENST00000366738 GNAI1P63096 354 aa10.53□□□□□ -0.72
MRPL55-211ENST00000366738 CALD1Q05682 793 aaKnown RBP10.53□□□□□ -0.72
MRPL55-211ENST00000366738 PPP1R42Q7Z4L9 355 aa10.53□□□□□ -0.72
MRPL55-211ENST00000366738 SP8Q8IXZ3 490 aa10.53□□□□□ -0.72
MRPL55-211ENST00000366738 TRMT2AQ8IZ69 625 aaKnown RBP10.53□□□□□ -0.72
MRPL55-211ENST00000366738 C2orf69Q8N8R5 385 aa10.53□□□□□ -0.72
MRPL55-211ENST00000366738 CSRNP1Q96S65 589 aa10.53□□□□□ -0.72
MRPL55-211ENST00000366738 UTP14AQ9BVJ6 771 aaKnown RBP10.53□□□□□ -0.72
MRPL55-211ENST00000366738 CHPF2Q9P2E5 772 aa10.53□□□□□ -0.72
MRPL55-211ENST00000366738 PSMD14O00487 310 aa10.52□□□□□ -0.73
MRPL55-211ENST00000366738 TCIRG1Q13488 830 aa10.52□□□□□ -0.73
MRPL55-211ENST00000366738 RBM26Q5T8P6 1007 aaKnown RBP10.52□□□□□ -0.73
MRPL55-211ENST00000366738 RASAL3Q86YV0 1011 aa10.52□□□□□ -0.73
MRPL55-211ENST00000366738 DBNDD1Q9H9R9 158 aa10.52□□□□□ -0.73
MRPL55-211ENST00000366738 CEP290O15078 2479 aa10.52□□□□□ -0.73
MRPL55-211ENST00000366738 LRRC37AA6NMS7 1700 aa10.52□□□□□ -0.73
MRPL55-211ENST00000366738 DDX60Q8IY21 1712 aaKnown RBP10.52□□□□□ -0.73
MRPL55-211ENST00000366738 ASTN2O75129 1339 aaPredicted RBP10.52□□□□□ -0.73
MRPL55-211ENST00000366738 MKI67P46013 3256 aaKnown RBP10.52□□□□□ -0.73
MRPL55-211ENST00000366738 HTTP42858 3142 aa10.51□□□□□ -0.73
MRPL55-211ENST00000366738 TSPYL6Q8N831 410 aa10.51□□□□□ -0.73
MRPL55-211ENST00000366738 DCPSQ96C86 337 aaKnown RBP10.51□□□□□ -0.73
MRPL55-211ENST00000366738 MYH16Q9H6N6 1097 aa10.51□□□□□ -0.73
MRPL55-211ENST00000366738 GGA3Q9NZ52 723 aa10.51□□□□□ -0.73
MRPL55-211ENST00000366738 BBOX1O75936 387 aa10.5□□□□□ -0.73
MRPL55-211ENST00000366738 EXOSC9Q06265 439 aaKnown RBP10.5□□□□□ -0.73
MRPL55-211ENST00000366738 GRAPQ13588 217 aa10.5□□□□□ -0.73
MRPL55-211ENST00000366738 HDGFL1Q5TGJ6 251 aa10.5□□□□□ -0.73
MRPL55-211ENST00000366738 C8orf58Q8NAV2 365 aa10.5□□□□□ -0.73
MRPL55-211ENST00000366738 GRAPLQ8TC17 118 aaPredicted RBP10.5□□□□□ -0.73
MRPL55-211ENST00000366738 DPF2Q92785 391 aa10.5□□□□□ -0.73
MRPL55-211ENST00000366738 CDCA5Q96FF9 252 aa10.5□□□□□ -0.73
MRPL55-211ENST00000366738 KCNQ5Q9NR82 932 aa10.5□□□□□ -0.73
MRPL55-211ENST00000366738 TRMT112Q9UI30 125 aaKnown RBP10.5□□□□□ -0.73
MRPL55-211ENST00000366738 RTL9Q8NET4 1388 aa10.5□□□□□ -0.73
MRPL55-211ENST00000366738 SCN9AQ15858 1988 aa10.49□□□□□ -0.73
MRPL55-211ENST00000366738 ATP5J2-PTCD1G3V325 749 aa10.49□□□□□ -0.73
MRPL55-211ENST00000366738 RIMBP2O15034 1052 aa10.49□□□□□ -0.73
MRPL55-211ENST00000366738 TBC1D8O95759 1140 aa10.49□□□□□ -0.73
MRPL55-211ENST00000366738 KIF4BQ2VIQ3 1234 aa10.49□□□□□ -0.73
MRPL55-211ENST00000366738 DDX46Q7L014 1031 aaKnown RBP10.49□□□□□ -0.73
MRPL55-211ENST00000366738 ZNF296Q8WUU4 475 aaPredicted RBP10.49□□□□□ -0.73
MRPL55-211ENST00000366738 ISCA1Q9BUE6 129 aa10.49□□□□□ -0.73
MRPL55-211ENST00000366738 HDAC9Q9UKV0 1011 aa10.49□□□□□ -0.73
MRPL55-211ENST00000366738 SH3TC1Q8TE82 1336 aa10.49□□□□□ -0.73
MRPL55-211ENST00000366738 ELL2O00472 640 aaPredicted RBP10.48□□□□□ -0.73
MRPL55-211ENST00000366738 DOK7Q18PE1 504 aa10.48□□□□□ -0.73
MRPL55-211ENST00000366738 WASHC4Q2M389 1173 aa10.48□□□□□ -0.73
MRPL55-211ENST00000366738 HSP90AB3PQ58FF7 597 aa10.48□□□□□ -0.73
MRPL55-211ENST00000366738 HABP4Q5JVS0 413 aaKnown RBP10.48□□□□□ -0.73
MRPL55-211ENST00000366738 ANKRD13DQ6ZTN6 518 aa10.48□□□□□ -0.73
MRPL55-211ENST00000366738 MOB2Q70IA6 237 aa10.48□□□□□ -0.73
MRPL55-211ENST00000366738 SULF1Q8IWU6 871 aa10.48□□□□□ -0.73
MRPL55-211ENST00000366738 PLBD2Q8NHP8 589 aa10.48□□□□□ -0.73
MRPL55-211ENST00000366738 CELF1Q92879 486 aaKnown RBP10.48□□□□□ -0.73
MRPL55-211ENST00000366738 FAM89AQ96GI7 184 aa10.48□□□□□ -0.73
MRPL55-211ENST00000366738 TRIOBPQ9H2D6 2365 aa10.48□□□□□ -0.73
MRPL55-211ENST00000366738 PAPPA2Q9BXP8 1791 aa10.47□□□□□ -0.73
MRPL55-211ENST00000366738 ECE2O60344 883 aa10.47□□□□□ -0.73
MRPL55-211ENST00000366738 HOXB7P09629 217 aa10.47□□□□□ -0.73
MRPL55-211ENST00000366738 RPS12P25398 132 aaKnown RBP10.47□□□□□ -0.73
MRPL55-211ENST00000366738 PKN2Q16513 984 aaKnown RBP10.47□□□□□ -0.73
MRPL55-211ENST00000366738 RTL5Q5HYW3 569 aaPredicted RBP10.47□□□□□ -0.73
MRPL55-211ENST00000366738 GCC1Q96CN9 775 aa10.47□□□□□ -0.73
MRPL55-211ENST00000366738 PHAXQ9H814 394 aaKnown RBP10.47□□□□□ -0.73
MRPL55-211ENST00000366738 DBF4Q9UBU7 674 aaPredicted RBP10.47□□□□□ -0.73
MRPL55-211ENST00000366738 SCAF8Q9UPN6 1271 aaKnown RBP10.47□□□□□ -0.73
MRPL55-211ENST00000366738 KIAA0100Q14667 2235 aaKnown RBP10.47□□□□□ -0.73
MRPL55-211ENST00000366738 C6orf229H3BNL8 230 aa10.46□□□□□ -0.73
MRPL55-211ENST00000366738 GPSM2P81274 684 aa10.46□□□□□ -0.73
MRPL55-211ENST00000366738 TWISTNBQ3B726 338 aaPredicted RBP10.46□□□□□ -0.73
MRPL55-211ENST00000366738 ANGEL2Q5VTE6 544 aaKnown RBP10.46□□□□□ -0.73
MRPL55-211ENST00000366738 POLLQ9UGP5 575 aa10.46□□□□□ -0.73
MRPL55-211ENST00000366738 NSFL1CQ9UNZ2 370 aaKnown RBP10.46□□□□□ -0.73
MRPL55-211ENST00000366738 CENPFP49454 3210 aa10.46□□□□□ -0.74
MRPL55-211ENST00000366738 CUL9Q8IWT3 2517 aa10.45□□□□□ -0.74
MRPL55-211ENST00000366738 VAMP4O75379 141 aa10.45□□□□□ -0.74
MRPL55-211ENST00000366738 MKRN3Q13064 507 aaKnown RBP10.45□□□□□ -0.74
MRPL55-211ENST00000366738 SF3B3Q15393 1217 aaKnown RBP10.45□□□□□ -0.74
MRPL55-211ENST00000366738 FBXO46Q6PJ61 603 aaPredicted RBP10.45□□□□□ -0.74
MRPL55-211ENST00000366738 TMC4Q7Z404 712 aa10.45□□□□□ -0.74
MRPL55-211ENST00000366738 REM2Q8IYK8 340 aaPredicted RBP10.45□□□□□ -0.74
MRPL55-211ENST00000366738 BRCA2P51587 3418 aa10.45□□□□□ -0.74
MRPL55-211ENST00000366738 SZT2Q5T011 3432 aa10.44□□□□□ -0.74
MRPL55-211ENST00000366738 UBE2Q2LH0YL09 131 aa10.44□□□□□ -0.74
MRPL55-211ENST00000366738 GPR25O00155 361 aa10.44□□□□□ -0.74
MRPL55-211ENST00000366738 TRIM28Q13263 835 aaKnown RBP10.44□□□□□ -0.74
MRPL55-211ENST00000366738 SCARF1Q14162 830 aa10.44□□□□□ -0.74
MRPL55-211ENST00000366738 JARID2Q92833 1246 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms