RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 FPGT-TNNI3KV9GXZ4 949 aa15.98■□□□□ 0.15
SQSTM1-201ENST00000360718 RIC1Q4ADV7 1423 aa15.98■□□□□ 0.15
SQSTM1-201ENST00000360718 GOLGA6L3A6NEY3 463 aa15.97■□□□□ 0.15
SQSTM1-201ENST00000360718 ERC2O15083 957 aa15.97■□□□□ 0.15
SQSTM1-201ENST00000360718 TM4SF1P30408 202 aa15.97■□□□□ 0.15
SQSTM1-201ENST00000360718 CASC1Q6TDU7 716 aa15.97■□□□□ 0.15
SQSTM1-201ENST00000360718 RIPOR2Q9Y4F9 1068 aa15.97■□□□□ 0.15
SQSTM1-201ENST00000360718 DDR1Q08345 913 aa15.97■□□□□ 0.15
SQSTM1-201ENST00000360718 DBNLQ9UJU6 430 aaKnown RBP15.97■□□□□ 0.15
SQSTM1-201ENST00000360718 TRAK2O60296 914 aa15.96■□□□□ 0.15
SQSTM1-201ENST00000360718 PTMSP20962 102 aa15.96■□□□□ 0.15
SQSTM1-201ENST00000360718 TPTE2Q6XPS3 522 aa15.96■□□□□ 0.15
SQSTM1-201ENST00000360718 TRIM6-TRIM34B2RNG4 842 aa15.96■□□□□ 0.14
SQSTM1-201ENST00000360718 GLRX3O76003 335 aaKnown RBP15.96■□□□□ 0.14
SQSTM1-201ENST00000360718 SF3B3Q15393 1217 aaKnown RBP15.96■□□□□ 0.14
SQSTM1-201ENST00000360718 CCDC152Q4G0S7 254 aa15.96■□□□□ 0.14
SQSTM1-201ENST00000360718 LDHAL6AQ6ZMR3 332 aa15.96■□□□□ 0.14
SQSTM1-201ENST00000360718 ECHDC1Q9NTX5 307 aa15.96■□□□□ 0.14
SQSTM1-201ENST00000360718 RTL9Q8NET4 1388 aa15.95■□□□□ 0.14
SQSTM1-201ENST00000360718 MAP4K4O95819 1239 aaPredicted RBP15.95■□□□□ 0.14
SQSTM1-201ENST00000360718 TIMM10P62072 90 aa15.95■□□□□ 0.14
SQSTM1-201ENST00000360718 DBNDD2Q9BQY9 259 aa15.95■□□□□ 0.14
SQSTM1-201ENST00000360718 ZNF609O15014 1411 aa15.95■□□□□ 0.14
SQSTM1-201ENST00000360718 NPHP1O15259 732 aa15.94■□□□□ 0.14
SQSTM1-201ENST00000360718 PRR5LQ6MZQ0 368 aa15.94■□□□□ 0.14
SQSTM1-201ENST00000360718 TBC1D9Q6ZT07 1266 aa15.94■□□□□ 0.14
SQSTM1-201ENST00000360718 CEP126Q9P2H0 1117 aa15.94■□□□□ 0.14
SQSTM1-201ENST00000360718 POLRMTO00411 1230 aaKnown RBP15.94■□□□□ 0.14
SQSTM1-201ENST00000360718 DDIT3P35638 169 aa15.94■□□□□ 0.14
SQSTM1-201ENST00000360718 SLC15A2Q16348 729 aa15.94■□□□□ 0.14
SQSTM1-201ENST00000360718 GBP4Q96PP9 640 aa15.94■□□□□ 0.14
SQSTM1-201ENST00000360718 GPR108Q9NPR9 543 aa15.94■□□□□ 0.14
SQSTM1-201ENST00000360718 SERPINB2P05120 415 aa15.93■□□□□ 0.14
SQSTM1-201ENST00000360718 BAG6P46379 1132 aa15.93■□□□□ 0.14
SQSTM1-201ENST00000360718 VGLL2Q8N8G2 317 aa15.93■□□□□ 0.14
SQSTM1-201ENST00000360718 CNBD1Q8NA66 436 aa15.93■□□□□ 0.14
SQSTM1-201ENST00000360718 RILPL2Q969X0 211 aa15.93■□□□□ 0.14
SQSTM1-201ENST00000360718 CNNM1Q9NRU3 951 aa15.93■□□□□ 0.14
SQSTM1-201ENST00000360718 ISY1Q9ULR0 285 aaKnown RBP15.93■□□□□ 0.14
SQSTM1-201ENST00000360718 HSP90AA1P07900 732 aaKnown RBP15.93■□□□□ 0.14
SQSTM1-201ENST00000360718 AKAP2Q9Y2D5 859 aa15.93■□□□□ 0.14
SQSTM1-201ENST00000360718 A0A1B0GUL7 405 aa15.92■□□□□ 0.14
SQSTM1-201ENST00000360718 FSD2A1L4K1 749 aa15.92■□□□□ 0.14
SQSTM1-201ENST00000360718 SF3B2Q13435 895 aaKnown RBP15.92■□□□□ 0.14
SQSTM1-201ENST00000360718 MSL1Q68DK7 614 aa15.92■□□□□ 0.14
SQSTM1-201ENST00000360718 CNTROBQ8N137 903 aa15.92■□□□□ 0.14
SQSTM1-201ENST00000360718 FLAD1Q8NFF5 587 aa15.92■□□□□ 0.14
SQSTM1-201ENST00000360718 HELBQ8NG08 1087 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-201ENST00000360718 CELF1Q92879 486 aaKnown RBP15.92■□□□□ 0.14
SQSTM1-201ENST00000360718 NLRP3Q96P20 1036 aa15.92■□□□□ 0.14
SQSTM1-201ENST00000360718 KIF2CQ99661 725 aa15.92■□□□□ 0.14
SQSTM1-201ENST00000360718 PDGFDQ9GZP0 370 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-201ENST00000360718 QSER1Q2KHR3 1735 aa15.92■□□□□ 0.14
SQSTM1-201ENST00000360718 SKOR2Q2VWA4 1001 aaPredicted RBP15.91■□□□□ 0.14
SQSTM1-201ENST00000360718 METTL24Q5JXM2 366 aa15.91■□□□□ 0.14
SQSTM1-201ENST00000360718 NEUROD6Q96NK8 337 aa15.91■□□□□ 0.14
SQSTM1-201ENST00000360718 A0A1B0GUL6 1792 aa15.91■□□□□ 0.14
SQSTM1-201ENST00000360718 K7ELQ4 463 aaPredicted RBP15.91■□□□□ 0.14
SQSTM1-201ENST00000360718 SNAP23O00161 211 aa15.91■□□□□ 0.14
SQSTM1-201ENST00000360718 ADORA1P30542 326 aa15.91■□□□□ 0.14
SQSTM1-201ENST00000360718 MPHOSPH8Q99549 860 aa15.91■□□□□ 0.14
SQSTM1-201ENST00000360718 NRXN2Q9P2S2 1712 aa15.9■□□□□ 0.14
SQSTM1-201ENST00000360718 IGHMBP2P38935 993 aaKnown RBP15.9■□□□□ 0.14
SQSTM1-201ENST00000360718 SLC51AQ86UW1 340 aa15.9■□□□□ 0.14
SQSTM1-201ENST00000360718 CDC5LQ99459 802 aaKnown RBP15.9■□□□□ 0.14
SQSTM1-201ENST00000360718 NDUFB9Q9Y6M9 179 aa15.9■□□□□ 0.14
SQSTM1-201ENST00000360718 ANKRD31Q8N7Z5 1873 aa15.9■□□□□ 0.14
SQSTM1-201ENST00000360718 MRE11P49959 708 aa15.89■□□□□ 0.13
SQSTM1-201ENST00000360718 NLGN1Q8N2Q7 840 aa15.89■□□□□ 0.13
SQSTM1-201ENST00000360718 BOLA2Q9H3K6 86 aa15.89■□□□□ 0.13
SQSTM1-201ENST00000360718 STK32BQ9NY57 414 aa15.89■□□□□ 0.13
SQSTM1-201ENST00000360718 TAF5LO75529 589 aa15.89■□□□□ 0.13
SQSTM1-201ENST00000360718 PDE8BO95263 885 aa15.89■□□□□ 0.13
SQSTM1-201ENST00000360718 GZF1Q9H116 711 aaPredicted RBP15.89■□□□□ 0.13
SQSTM1-201ENST00000360718 XRCC6P12956 609 aaKnown RBP eCLIP15.88■□□□□ 0.13
SQSTM1-201ENST00000360718 RAB3GAP1Q15042 981 aa15.88■□□□□ 0.13
SQSTM1-201ENST00000360718 TNPO1Q92973 898 aaKnown RBP15.88■□□□□ 0.13
SQSTM1-201ENST00000360718 EDC3Q96F86 508 aaKnown RBP15.88■□□□□ 0.13
SQSTM1-201ENST00000360718 MROH5Q6ZUA9 1318 aa15.88■□□□□ 0.13
SQSTM1-201ENST00000360718 WTIPA6NIX2 430 aaPredicted RBP15.88■□□□□ 0.13
SQSTM1-201ENST00000360718 MMP10P09238 476 aa15.88■□□□□ 0.13
SQSTM1-201ENST00000360718 ATP5JP18859 108 aa15.88■□□□□ 0.13
SQSTM1-201ENST00000360718 ATP2B3Q16720 1220 aa15.88■□□□□ 0.13
SQSTM1-201ENST00000360718 XAGE2Q96GT9 111 aa15.88■□□□□ 0.13
SQSTM1-201ENST00000360718 GORABQ5T7V8 394 aa15.87■□□□□ 0.13
SQSTM1-201ENST00000360718 ANKRD18AQ8IVF6 992 aa15.87■□□□□ 0.13
SQSTM1-201ENST00000360718 FGFR2P21802 821 aa15.87■□□□□ 0.13
SQSTM1-201ENST00000360718 CHRNDQ07001 517 aa15.87■□□□□ 0.13
SQSTM1-201ENST00000360718 EVI5LQ96CN4 794 aa15.87■□□□□ 0.13
SQSTM1-201ENST00000360718 IL25Q9H293 177 aa15.87■□□□□ 0.13
SQSTM1-201ENST00000360718 ARAP2Q8WZ64 1704 aa15.87■□□□□ 0.13
SQSTM1-201ENST00000360718 CHMLP26374 656 aa15.86■□□□□ 0.13
SQSTM1-201ENST00000360718 ST5P78524 1137 aa15.86■□□□□ 0.13
SQSTM1-201ENST00000360718 RABEP1Q15276 862 aa15.86■□□□□ 0.13
SQSTM1-201ENST00000360718 BSDC1Q9NW68 430 aaPredicted RBP15.86■□□□□ 0.13
SQSTM1-201ENST00000360718 REC8O95072 547 aa15.85■□□□□ 0.13
SQSTM1-201ENST00000360718 RPS8P62241 208 aaKnown RBP15.85■□□□□ 0.13
SQSTM1-201ENST00000360718 CRY2Q49AN0 593 aa15.85■□□□□ 0.13
SQSTM1-201ENST00000360718 CCDC158Q5M9N0 1113 aa15.85■□□□□ 0.13
SQSTM1-201ENST00000360718 GOLGA6L22H0YM25 854 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 174.9 ms