RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 DPCR1Q3MIW9 517 aa13.23□□□□□ -0.29
CNOT3-202ENST00000358389 TTC5Q8N0Z6 440 aa13.23□□□□□ -0.29
CNOT3-202ENST00000358389 ECHDC1Q9NTX5 307 aa13.23□□□□□ -0.29
CNOT3-202ENST00000358389 COL3A1P02461 1466 aaPredicted RBP13.23□□□□□ -0.29
CNOT3-202ENST00000358389 EIF3CLB5ME19 914 aaKnown RBP13.22□□□□□ -0.29
CNOT3-202ENST00000358389 SLC3A2P08195 630 aaKnown RBP13.22□□□□□ -0.29
CNOT3-202ENST00000358389 IBSPP21815 317 aaPredicted RBP13.22□□□□□ -0.29
CNOT3-202ENST00000358389 FAM160A1Q05DH4 1040 aa13.22□□□□□ -0.29
CNOT3-202ENST00000358389 EIF3CQ99613 913 aaKnown RBP13.22□□□□□ -0.29
CNOT3-202ENST00000358389 PES1O00541 588 aaKnown RBP13.22□□□□□ -0.29
CNOT3-202ENST00000358389 DNAAF4Q8WXU2 420 aa13.22□□□□□ -0.29
CNOT3-202ENST00000358389 TM6SF1Q9BZW5 370 aa13.22□□□□□ -0.29
CNOT3-202ENST00000358389 USP44Q9H0E7 712 aa13.22□□□□□ -0.29
CNOT3-202ENST00000358389 GOLPH3LQ9H4A5 285 aa13.22□□□□□ -0.29
CNOT3-202ENST00000358389 ZSCAN16Q9H4T2 348 aaPredicted RBP13.22□□□□□ -0.29
CNOT3-202ENST00000358389 SLC52A1Q9NWF4 448 aa13.22□□□□□ -0.29
CNOT3-202ENST00000358389 ZFYVE9O95405 1425 aa13.22□□□□□ -0.29
CNOT3-202ENST00000358389 ERLIN1O75477 346 aa13.22□□□□□ -0.29
CNOT3-202ENST00000358389 RHOXF2BP0C7M4 288 aa13.22□□□□□ -0.29
CNOT3-202ENST00000358389 WWC2Q6AWC2 1192 aa13.22□□□□□ -0.29
CNOT3-202ENST00000358389 FOXR1Q6PIV2 292 aa13.22□□□□□ -0.29
CNOT3-202ENST00000358389 ABTB2Q8N961 1025 aa13.22□□□□□ -0.29
CNOT3-202ENST00000358389 USP28Q96RU2 1077 aa13.22□□□□□ -0.29
CNOT3-202ENST00000358389 RHOXF2Q9BQY4 288 aa13.22□□□□□ -0.29
CNOT3-202ENST00000358389 GEMIN8Q9NWZ8 242 aaKnown RBP13.22□□□□□ -0.29
CNOT3-202ENST00000358389 FAN1Q9Y2M0 1017 aa13.22□□□□□ -0.29
CNOT3-202ENST00000358389 FANCCQ00597 558 aa13.21□□□□□ -0.29
CNOT3-202ENST00000358389 COL9A3Q14050 684 aaPredicted RBP13.21□□□□□ -0.29
CNOT3-202ENST00000358389 HDGFL1Q5TGJ6 251 aa13.21□□□□□ -0.29
CNOT3-202ENST00000358389 NFATC2IPQ8NCF5 419 aa13.21□□□□□ -0.29
CNOT3-202ENST00000358389 RNF216Q9NWF9 866 aaPredicted RBP13.21□□□□□ -0.29
CNOT3-202ENST00000358389 AOX1Q06278 1338 aa13.21□□□□□ -0.29
CNOT3-202ENST00000358389 TUBB4AP04350 444 aa13.21□□□□□ -0.29
CNOT3-202ENST00000358389 RIC3Q7Z5B4 369 aa13.21□□□□□ -0.29
CNOT3-202ENST00000358389 PROSER2Q86WR7 435 aaPredicted RBP13.21□□□□□ -0.29
CNOT3-202ENST00000358389 PPM1EQ8WY54 764 aa13.21□□□□□ -0.29
CNOT3-202ENST00000358389 KIAA0232Q92628 1395 aa13.21□□□□□ -0.29
CNOT3-202ENST00000358389 ATP8B1O43520 1251 aa13.21□□□□□ -0.3
CNOT3-202ENST00000358389 POLR3DP05423 398 aaPredicted RBP13.21□□□□□ -0.3
CNOT3-202ENST00000358389 RBM43Q6ZSC3 357 aaKnown RBP13.21□□□□□ -0.3
CNOT3-202ENST00000358389 MRPS27Q92552 414 aaKnown RBP13.21□□□□□ -0.3
CNOT3-202ENST00000358389 NCAPGQ9BPX3 1015 aa13.21□□□□□ -0.3
CNOT3-202ENST00000358389 RABEP2Q9H5N1 569 aa13.21□□□□□ -0.3
CNOT3-202ENST00000358389 NLRP2Q9NX02 1062 aa13.21□□□□□ -0.3
CNOT3-202ENST00000358389 PA2G4Q9UQ80 394 aaKnown RBP13.21□□□□□ -0.3
CNOT3-202ENST00000358389 MAGEA9P43362 315 aa13.2□□□□□ -0.3
CNOT3-202ENST00000358389 PACS2Q86VP3 889 aa13.2□□□□□ -0.3
CNOT3-202ENST00000358389 OSBPL5Q9H0X9 879 aaPredicted RBP13.2□□□□□ -0.3
CNOT3-202ENST00000358389 H3BQF6 201 aa13.2□□□□□ -0.3
CNOT3-202ENST00000358389 RPS6KB1P23443 525 aa13.2□□□□□ -0.3
CNOT3-202ENST00000358389 EIF4A2Q14240 407 aaKnown RBP13.2□□□□□ -0.3
CNOT3-202ENST00000358389 CCDC93Q567U6 631 aa13.2□□□□□ -0.3
CNOT3-202ENST00000358389 Q6ZUG5 572 aa13.2□□□□□ -0.3
CNOT3-202ENST00000358389 CPLX1O14810 134 aa13.2□□□□□ -0.3
CNOT3-202ENST00000358389 ATP1A3P13637 1013 aa13.2□□□□□ -0.3
CNOT3-202ENST00000358389 GUCY2CP25092 1073 aa13.2□□□□□ -0.3
CNOT3-202ENST00000358389 TAF7Q15545 349 aaPredicted RBP13.2□□□□□ -0.3
CNOT3-202ENST00000358389 BANK1Q8NDB2 785 aa13.2□□□□□ -0.3
CNOT3-202ENST00000358389 PHLPP2Q6ZVD8 1323 aa13.2□□□□□ -0.3
CNOT3-202ENST00000358389 NCKAP5LQ9HCH0 1330 aa13.2□□□□□ -0.3
CNOT3-202ENST00000358389 MYCNP04198 464 aaPredicted RBP13.2□□□□□ -0.3
CNOT3-202ENST00000358389 NBPF11Q86T75 865 aa13.2□□□□□ -0.3
CNOT3-202ENST00000358389 LZTFL1Q9NQ48 299 aa13.2□□□□□ -0.3
CNOT3-202ENST00000358389 QRICH2Q9H0J4 1663 aa13.19□□□□□ -0.3
CNOT3-202ENST00000358389 KNDC1Q76NI1 1749 aa13.19□□□□□ -0.3
CNOT3-202ENST00000358389 HSP90AB2PQ58FF8 381 aa13.19□□□□□ -0.3
CNOT3-202ENST00000358389 EVI5LQ96CN4 794 aa13.19□□□□□ -0.3
CNOT3-202ENST00000358389 DESI2Q9BSY9 194 aa13.19□□□□□ -0.3
CNOT3-202ENST00000358389 PHAXQ9H814 394 aaKnown RBP13.19□□□□□ -0.3
CNOT3-202ENST00000358389 YY1AP1Q9H869 796 aa13.19□□□□□ -0.3
CNOT3-202ENST00000358389 RESTQ13127 1097 aa13.19□□□□□ -0.3
CNOT3-202ENST00000358389 KIF4BQ2VIQ3 1234 aa13.19□□□□□ -0.3
CNOT3-202ENST00000358389 ERC1Q8IUD2 1116 aa13.19□□□□□ -0.3
CNOT3-202ENST00000358389 TTC21BQ7Z4L5 1316 aa13.19□□□□□ -0.3
CNOT3-202ENST00000358389 CBFA2T2O43439 604 aa13.19□□□□□ -0.3
CNOT3-202ENST00000358389 NBPF7P0C2Y1 421 aaPredicted RBP13.19□□□□□ -0.3
CNOT3-202ENST00000358389 NECTIN1Q15223 517 aa13.19□□□□□ -0.3
CNOT3-202ENST00000358389 SYNE3Q6ZMZ3 975 aa13.19□□□□□ -0.3
CNOT3-202ENST00000358389 HDXQ7Z353 690 aa13.19□□□□□ -0.3
CNOT3-202ENST00000358389 REXO1L1PQ8IX06 675 aa13.19□□□□□ -0.3
CNOT3-202ENST00000358389 SSH3Q8TE77 659 aa13.19□□□□□ -0.3
CNOT3-202ENST00000358389 TAF6LQ9Y6J9 622 aa13.19□□□□□ -0.3
CNOT3-202ENST00000358389 TULP4Q9NRJ4 1543 aa13.18□□□□□ -0.3
CNOT3-202ENST00000358389 H0YHG0 523 aa13.18□□□□□ -0.3
CNOT3-202ENST00000358389 ANXA1P04083 346 aa13.18□□□□□ -0.3
CNOT3-202ENST00000358389 IDI1Q13907 227 aa13.18□□□□□ -0.3
CNOT3-202ENST00000358389 DHX8Q14562 1220 aaKnown RBP13.18□□□□□ -0.3
CNOT3-202ENST00000358389 EP400NLQ6ZTU2 488 aa13.18□□□□□ -0.3
CNOT3-202ENST00000358389 CCDC91Q7Z6B0 441 aa13.18□□□□□ -0.3
CNOT3-202ENST00000358389 WDR24Q96S15 920 aa13.18□□□□□ -0.3
CNOT3-202ENST00000358389 ACBD3Q9H3P7 528 aa13.18□□□□□ -0.3
CNOT3-202ENST00000358389 BRMS1Q9HCU9 246 aa13.18□□□□□ -0.3
CNOT3-202ENST00000358389 PPRC1Q5VV67 1664 aaKnown RBP13.18□□□□□ -0.3
CNOT3-202ENST00000358389 WDHD1O75717 1129 aaPredicted RBP13.18□□□□□ -0.3
CNOT3-202ENST00000358389 DDX58O95786 925 aaKnown RBP13.18□□□□□ -0.3
CNOT3-202ENST00000358389 CHMP4BP1P59074 171 aa13.18□□□□□ -0.3
CNOT3-202ENST00000358389 DHX58Q96C10 678 aa13.18□□□□□ -0.3
CNOT3-202ENST00000358389 NEK1Q96PY6 1258 aa13.18□□□□□ -0.3
CNOT3-202ENST00000358389 MPHOSPH8Q99549 860 aa13.18□□□□□ -0.3
CNOT3-202ENST00000358389 PPP2R2CQ9Y2T4 447 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms