RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 CDCA5Q96FF9 252 aa20.65■□□□□ 0.9
COPE-202ENST00000349893 EYA3Q99504 573 aa20.65■□□□□ 0.9
COPE-202ENST00000349893 MAPK8IP3Q9UPT6 1336 aa20.64■□□□□ 0.89
COPE-202ENST00000349893 RIMBP2O15034 1052 aa20.64■□□□□ 0.89
COPE-202ENST00000349893 ZNF280AP59817 542 aaPredicted RBP20.64■□□□□ 0.89
COPE-202ENST00000349893 AIMP1Q12904 312 aaKnown RBP20.64■□□□□ 0.89
COPE-202ENST00000349893 RBM26Q5T8P6 1007 aaKnown RBP20.64■□□□□ 0.89
COPE-202ENST00000349893 TBC1D16Q8TBP0 767 aa20.64■□□□□ 0.89
COPE-202ENST00000349893 ISCA1Q9BUE6 129 aa20.64■□□□□ 0.89
COPE-202ENST00000349893 HPS5Q9UPZ3 1129 aa20.64■□□□□ 0.89
COPE-202ENST00000349893 PSME4Q14997 1843 aa20.64■□□□□ 0.89
COPE-202ENST00000349893 ASTN2O75129 1339 aaPredicted RBP20.63■□□□□ 0.89
COPE-202ENST00000349893 C6orf229H3BNL8 230 aa20.63■□□□□ 0.89
COPE-202ENST00000349893 PODXL2Q9NZ53 605 aa20.63■□□□□ 0.89
COPE-202ENST00000349893 HTTP42858 3142 aa20.62■□□□□ 0.89
COPE-202ENST00000349893 DOK7Q18PE1 504 aa20.62■□□□□ 0.89
COPE-202ENST00000349893 PITPNM2Q9BZ72 1349 aa20.61■□□□□ 0.89
COPE-202ENST00000349893 NOM1Q5C9Z4 860 aaKnown RBP20.61■□□□□ 0.89
COPE-202ENST00000349893 PLBD2Q8NHP8 589 aa20.61■□□□□ 0.89
COPE-202ENST00000349893 NECTIN2Q92692 538 aa20.61■□□□□ 0.89
COPE-202ENST00000349893 MKI67P46013 3256 aaKnown RBP20.61■□□□□ 0.89
COPE-202ENST00000349893 AGBL3Q8NEM8 1001 aa20.6■□□□□ 0.89
COPE-202ENST00000349893 FAM89AQ96GI7 184 aa20.6■□□□□ 0.89
COPE-202ENST00000349893 RIPK4P57078 832 aa20.59■□□□□ 0.89
COPE-202ENST00000349893 RPS8P62241 208 aaKnown RBP20.59■□□□□ 0.89
COPE-202ENST00000349893 TRIM28Q13263 835 aaKnown RBP20.59■□□□□ 0.89
COPE-202ENST00000349893 ANGEL2Q5VTE6 544 aaKnown RBP20.59■□□□□ 0.89
COPE-202ENST00000349893 GMLQ99445 158 aa20.59■□□□□ 0.89
COPE-202ENST00000349893 SCARF1Q14162 830 aa20.58■□□□□ 0.89
COPE-202ENST00000349893 RSBN1LQ6PCB5 846 aaPredicted RBP20.58■□□□□ 0.89
COPE-202ENST00000349893 ANKRD13DQ6ZTN6 518 aa20.58■□□□□ 0.89
COPE-202ENST00000349893 ZNF296Q8WUU4 475 aaPredicted RBP20.58■□□□□ 0.89
COPE-202ENST00000349893 ZC3H12CQ9C0D7 883 aaKnown RBP20.58■□□□□ 0.89
COPE-202ENST00000349893 LMOD3Q0VAK6 560 aa20.57■□□□□ 0.88
COPE-202ENST00000349893 CHPF2Q9P2E5 772 aa20.57■□□□□ 0.88
COPE-202ENST00000349893 CHL1O00533 1208 aa20.56■□□□□ 0.88
COPE-202ENST00000349893 HOXB7P09629 217 aa20.56■□□□□ 0.88
COPE-202ENST00000349893 TM4SF4P48230 202 aa20.56■□□□□ 0.88
COPE-202ENST00000349893 IRS4O14654 1257 aaPredicted RBP20.55■□□□□ 0.88
COPE-202ENST00000349893 TMPOP42166 694 aaKnown RBP20.55■□□□□ 0.88
COPE-202ENST00000349893 KRT24Q2M2I5 525 aa20.55■□□□□ 0.88
COPE-202ENST00000349893 ZNF428Q96B54 188 aa20.55■□□□□ 0.88
COPE-202ENST00000349893 CFHR5Q9BXR6 569 aa20.55■□□□□ 0.88
COPE-202ENST00000349893 ATP5J2-PTCD1G3V325 749 aa20.54■□□□□ 0.88
COPE-202ENST00000349893 UFL1O94874 794 aa20.54■□□□□ 0.88
COPE-202ENST00000349893 MYOZ2Q9NPC6 264 aa20.54■□□□□ 0.88
COPE-202ENST00000349893 HDAC9Q9UKV0 1011 aa20.54■□□□□ 0.88
COPE-202ENST00000349893 TBC1D8O95759 1140 aa20.53■□□□□ 0.88
COPE-202ENST00000349893 USP17L8P0C7I0 530 aa20.53■□□□□ 0.88
COPE-202ENST00000349893 FBXO46Q6PJ61 603 aaPredicted RBP20.53■□□□□ 0.88
COPE-202ENST00000349893 DBF4Q9UBU7 674 aaPredicted RBP20.53■□□□□ 0.88
COPE-202ENST00000349893 GGA1Q9UJY5 639 aa20.53■□□□□ 0.88
COPE-202ENST00000349893 CENPFP49454 3210 aa20.53■□□□□ 0.88
COPE-202ENST00000349893 GPR25O00155 361 aa20.52■□□□□ 0.88
COPE-202ENST00000349893 HDGFL1Q5TGJ6 251 aa20.52■□□□□ 0.88
COPE-202ENST00000349893 MOB2Q70IA6 237 aa20.52■□□□□ 0.88
COPE-202ENST00000349893 GCC1Q96CN9 775 aa20.52■□□□□ 0.88
COPE-202ENST00000349893 ANKIB1Q9P2G1 1089 aa20.52■□□□□ 0.88
COPE-202ENST00000349893 ZNF646O15015 1829 aaPredicted RBP20.52■□□□□ 0.88
COPE-202ENST00000349893 ZBTB38Q8NAP3 1195 aaPredicted RBP20.51■□□□□ 0.87
COPE-202ENST00000349893 SEC31BQ9NQW1 1179 aa20.51■□□□□ 0.87
COPE-202ENST00000349893 G3V3G9 751 aa20.5■□□□□ 0.87
COPE-202ENST00000349893 UBE2Q2LH0YL09 131 aa20.5■□□□□ 0.87
COPE-202ENST00000349893 RTL5Q5HYW3 569 aaPredicted RBP20.5■□□□□ 0.87
COPE-202ENST00000349893 DCAF8Q5TAQ9 597 aa20.5■□□□□ 0.87
COPE-202ENST00000349893 PODNQ7Z5L7 613 aa20.5■□□□□ 0.87
COPE-202ENST00000349893 HYPKQ9NX55 129 aa20.5■□□□□ 0.87
COPE-202ENST00000349893 USP17L3A6NCW0 530 aa20.49■□□□□ 0.87
COPE-202ENST00000349893 USP17L4A6NCW7 530 aa20.49■□□□□ 0.87
COPE-202ENST00000349893 HSP90B1P14625 803 aaKnown RBP20.49■□□□□ 0.87
COPE-202ENST00000349893 USP17L1Q7RTZ2 530 aa20.49■□□□□ 0.87
COPE-202ENST00000349893 XDHP47989 1333 aa20.49■□□□□ 0.87
COPE-202ENST00000349893 BRCA2P51587 3418 aa20.48■□□□□ 0.87
COPE-202ENST00000349893 SREBF2Q12772 1141 aa20.47■□□□□ 0.87
COPE-202ENST00000349893 NBPF9Q3BBW0 867 aa20.47■□□□□ 0.87
COPE-202ENST00000349893 CCDC152Q4G0S7 254 aa20.47■□□□□ 0.87
COPE-202ENST00000349893 FKTNO75072 461 aa20.46■□□□□ 0.87
COPE-202ENST00000349893 SCAF8Q9UPN6 1271 aaKnown RBP20.46■□□□□ 0.87
COPE-202ENST00000349893 TRIM35Q9UPQ4 493 aa20.46■□□□□ 0.87
COPE-202ENST00000349893 LAMB1P07942 1786 aa20.46■□□□□ 0.87
COPE-202ENST00000349893 PCCAP05165 728 aaPredicted RBP20.45■□□□□ 0.86
COPE-202ENST00000349893 ATP2B4P23634 1241 aa20.45■□□□□ 0.86
COPE-202ENST00000349893 MMP14P50281 582 aa20.45■□□□□ 0.86
COPE-202ENST00000349893 PRAMEF18Q5VWM3 479 aa20.45■□□□□ 0.86
COPE-202ENST00000349893 R3HDMLQ9H3Y0 253 aa20.45■□□□□ 0.86
COPE-202ENST00000349893 MED23Q9ULK4 1368 aa20.45■□□□□ 0.86
COPE-202ENST00000349893 RBBP6Q7Z6E9 1792 aaKnown RBP20.44■□□□□ 0.86
COPE-202ENST00000349893 WNT10BO00744 389 aa20.44■□□□□ 0.86
COPE-202ENST00000349893 PDE8AO60658 829 aa20.44■□□□□ 0.86
COPE-202ENST00000349893 DACT2Q5SW24 774 aa20.44■□□□□ 0.86
COPE-202ENST00000349893 LDLRAD1Q5T700 205 aa20.44■□□□□ 0.86
COPE-202ENST00000349893 NF2P35240 595 aa20.43■□□□□ 0.86
COPE-202ENST00000349893 HABP4Q5JVS0 413 aaKnown RBP20.43■□□□□ 0.86
COPE-202ENST00000349893 CCDC191Q8NCU4 936 aa20.43■□□□□ 0.86
COPE-202ENST00000349893 MYO3BQ8WXR4 1341 aa20.43■□□□□ 0.86
COPE-202ENST00000349893 ALDH1A1P00352 501 aa20.42■□□□□ 0.86
COPE-202ENST00000349893 PTPN12Q05209 780 aaKnown RBP20.42■□□□□ 0.86
COPE-202ENST00000349893 TTLL12Q14166 644 aaPredicted RBP20.42■□□□□ 0.86
COPE-202ENST00000349893 DUSP27Q5VZP5 1158 aa20.42■□□□□ 0.86
COPE-202ENST00000349893 ANKRD18AQ8IVF6 992 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms