RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 NUP98P52948 1817 aa24.36■■□□□ 1.49
CHRNA3-202ENST00000348639 IRS4O14654 1257 aaPredicted RBP24.36■■□□□ 1.49
CHRNA3-202ENST00000348639 ZNF34Q8IZ26 560 aa24.36■■□□□ 1.49
CHRNA3-202ENST00000348639 ALDH8A1Q9H2A2 487 aaPredicted RBP24.36■■□□□ 1.49
CHRNA3-202ENST00000348639 HELLSQ9NRZ9 838 aa24.36■■□□□ 1.49
CHRNA3-202ENST00000348639 U3KPZ7 1027 aaPredicted RBP24.36■■□□□ 1.49
CHRNA3-202ENST00000348639 SPEF2Q9C093 1822 aa24.36■■□□□ 1.49
CHRNA3-202ENST00000348639 WDR33Q9C0J8 1336 aaKnown RBP24.36■■□□□ 1.49
CHRNA3-202ENST00000348639 CHGBP05060 677 aa24.35■■□□□ 1.49
CHRNA3-202ENST00000348639 SEC62Q99442 399 aaKnown RBP24.35■■□□□ 1.49
CHRNA3-202ENST00000348639 LARGE1O95461 756 aa24.35■■□□□ 1.49
CHRNA3-202ENST00000348639 ITGA6P23229 1130 aa24.35■■□□□ 1.49
CHRNA3-202ENST00000348639 ITPK1Q13572 414 aa24.35■■□□□ 1.49
CHRNA3-202ENST00000348639 CCDC158Q5M9N0 1113 aa24.35■■□□□ 1.49
CHRNA3-202ENST00000348639 FOXD4L5Q5VV16 416 aaPredicted RBP24.35■■□□□ 1.49
CHRNA3-202ENST00000348639 BLOC1S2Q6QNY1 142 aa24.35■■□□□ 1.49
CHRNA3-202ENST00000348639 FOXD4L4Q8WXT5 416 aaPredicted RBP24.35■■□□□ 1.49
CHRNA3-202ENST00000348639 KRT32Q14532 448 aa24.34■■□□□ 1.49
CHRNA3-202ENST00000348639 CCDC129Q6ZRS4 1044 aa24.34■■□□□ 1.49
CHRNA3-202ENST00000348639 XAGE2Q96GT9 111 aa24.34■■□□□ 1.49
CHRNA3-202ENST00000348639 GREM2Q9H772 168 aa24.34■■□□□ 1.49
CHRNA3-202ENST00000348639 BRPF3Q9ULD4 1205 aa24.34■■□□□ 1.49
CHRNA3-202ENST00000348639 RIPOR2Q9Y4F9 1068 aa24.34■■□□□ 1.49
CHRNA3-202ENST00000348639 UBN2Q6ZU65 1347 aa24.34■■□□□ 1.49
CHRNA3-202ENST00000348639 ANKRD18BA2A2Z9 1011 aa24.34■■□□□ 1.49
CHRNA3-202ENST00000348639 PDE8AO60658 829 aa24.34■■□□□ 1.49
CHRNA3-202ENST00000348639 PRPF40AO75400 957 aaKnown RBP24.33■■□□□ 1.49
CHRNA3-202ENST00000348639 RPS6KB1P23443 525 aa24.33■■□□□ 1.49
CHRNA3-202ENST00000348639 ANKRD1Q15327 319 aa24.33■■□□□ 1.49
CHRNA3-202ENST00000348639 ZMYM1Q5SVZ6 1142 aa24.33■■□□□ 1.49
CHRNA3-202ENST00000348639 SMC3Q9UQE7 1217 aa24.33■■□□□ 1.49
CHRNA3-202ENST00000348639 TAF6LQ9Y6J9 622 aa24.33■■□□□ 1.49
CHRNA3-202ENST00000348639 BCL9LQ86UU0 1499 aa24.33■■□□□ 1.49
CHRNA3-202ENST00000348639 VPS72Q15906 364 aa24.32■■□□□ 1.48
CHRNA3-202ENST00000348639 GORABQ5T7V8 394 aa24.32■■□□□ 1.48
CHRNA3-202ENST00000348639 LDHAL6AQ6ZMR3 332 aa24.32■■□□□ 1.48
CHRNA3-202ENST00000348639 ADORA1P30542 326 aa24.32■■□□□ 1.48
CHRNA3-202ENST00000348639 TTC39AQ5SRH9 613 aa24.32■■□□□ 1.48
CHRNA3-202ENST00000348639 RIC1Q4ADV7 1423 aa24.31■■□□□ 1.48
CHRNA3-202ENST00000348639 MYH3P11055 1940 aa24.31■■□□□ 1.48
CHRNA3-202ENST00000348639 FAM177BA6PVY3 158 aa24.31■■□□□ 1.48
CHRNA3-202ENST00000348639 XRCC6P12956 609 aaKnown RBP eCLIP24.31■■□□□ 1.48
CHRNA3-202ENST00000348639 MRE11P49959 708 aa24.31■■□□□ 1.48
CHRNA3-202ENST00000348639 ME3Q16798 604 aa24.31■■□□□ 1.48
CHRNA3-202ENST00000348639 CCDC83Q8IWF9 413 aa24.31■■□□□ 1.48
CHRNA3-202ENST00000348639 AK7Q96M32 723 aa24.31■■□□□ 1.48
CHRNA3-202ENST00000348639 CICQ96RK0 1608 aaPredicted RBP24.31■■□□□ 1.48
CHRNA3-202ENST00000348639 RNF113AO15541 343 aaKnown RBP24.3■■□□□ 1.48
CHRNA3-202ENST00000348639 METTL24Q5JXM2 366 aa24.3■■□□□ 1.48
CHRNA3-202ENST00000348639 SMARCC1Q92922 1105 aaPredicted RBP24.3■■□□□ 1.48
CHRNA3-202ENST00000348639 TPCN1Q9ULQ1 816 aa24.3■■□□□ 1.48
CHRNA3-202ENST00000348639 RREB1Q92766 1687 aa24.3■■□□□ 1.48
CHRNA3-202ENST00000348639 COL9A3Q14050 684 aaPredicted RBP24.3■■□□□ 1.48
CHRNA3-202ENST00000348639 CHAMP1Q96JM3 812 aa24.3■■□□□ 1.48
CHRNA3-202ENST00000348639 DSCC1Q9BVC3 393 aa24.3■■□□□ 1.48
CHRNA3-202ENST00000348639 ABCC12Q96J65 1359 aa24.29■■□□□ 1.48
CHRNA3-202ENST00000348639 ATP2B3Q16720 1220 aa24.29■■□□□ 1.48
CHRNA3-202ENST00000348639 LRRFIP1Q32MZ4 808 aaKnown RBP24.29■■□□□ 1.48
CHRNA3-202ENST00000348639 CNNM1Q9NRU3 951 aa24.28■■□□□ 1.48
CHRNA3-202ENST00000348639 CYP21A2P08686 494 aa24.28■■□□□ 1.48
CHRNA3-202ENST00000348639 SYT1P21579 422 aa24.28■■□□□ 1.48
CHRNA3-202ENST00000348639 FKBP4Q02790 459 aaKnown RBP eCLIP24.28■■□□□ 1.48
CHRNA3-202ENST00000348639 ST3GAL1Q11201 340 aa24.28■■□□□ 1.48
CHRNA3-202ENST00000348639 NEK1Q96PY6 1258 aa24.28■■□□□ 1.48
CHRNA3-202ENST00000348639 STX6O43752 255 aa24.27■■□□□ 1.48
CHRNA3-202ENST00000348639 ZSCAN22P10073 491 aaPredicted RBP24.27■■□□□ 1.48
CHRNA3-202ENST00000348639 SUSD4Q5VX71 490 aa24.27■■□□□ 1.48
CHRNA3-202ENST00000348639 GJB2P29033 226 aa24.27■■□□□ 1.48
CHRNA3-202ENST00000348639 TOB2Q14106 344 aaPredicted RBP24.27■■□□□ 1.48
CHRNA3-202ENST00000348639 SLFNL1Q499Z3 407 aa24.27■■□□□ 1.48
CHRNA3-202ENST00000348639 VGLL2Q8N8G2 317 aa24.27■■□□□ 1.48
CHRNA3-202ENST00000348639 GRPEL1Q9HAV7 217 aa24.27■■□□□ 1.48
CHRNA3-202ENST00000348639 USP21Q9UK80 565 aa24.27■■□□□ 1.48
CHRNA3-202ENST00000348639 MYH14Q7Z406 1995 aaKnown RBP24.26■■□□□ 1.47
CHRNA3-202ENST00000348639 CAMTA2O94983 1202 aa24.26■■□□□ 1.47
CHRNA3-202ENST00000348639 NCLP19338 710 aaKnown RBP24.26■■□□□ 1.47
CHRNA3-202ENST00000348639 HSPA1LP34931 641 aa24.26■■□□□ 1.47
CHRNA3-202ENST00000348639 GAS2L3Q86XJ1 694 aa24.26■■□□□ 1.47
CHRNA3-202ENST00000348639 FNBP4Q8N3X1 1017 aaPredicted RBP24.26■■□□□ 1.47
CHRNA3-202ENST00000348639 GPT2Q8TD30 523 aa24.26■■□□□ 1.47
CHRNA3-202ENST00000348639 ZFYP08048 801 aaPredicted RBP24.25■■□□□ 1.47
CHRNA3-202ENST00000348639 HCLS1P14317 486 aaPredicted RBP24.25■■□□□ 1.47
CHRNA3-202ENST00000348639 TCEANC2Q96MN5 208 aa24.25■■□□□ 1.47
CHRNA3-202ENST00000348639 MAST3O60307 1309 aa24.25■■□□□ 1.47
CHRNA3-202ENST00000348639 KCNQ4P56696 695 aa24.25■■□□□ 1.47
CHRNA3-202ENST00000348639 PARP10Q53GL7 1025 aa24.25■■□□□ 1.47
CHRNA3-202ENST00000348639 CAVIN1Q6NZI2 390 aaKnown RBP24.25■■□□□ 1.47
CHRNA3-202ENST00000348639 ZNF512BQ96KM6 892 aaPredicted RBP24.25■■□□□ 1.47
CHRNA3-202ENST00000348639 SCARF1Q14162 830 aa24.24■■□□□ 1.47
CHRNA3-202ENST00000348639 NECAB1Q8N987 351 aa24.24■■□□□ 1.47
CHRNA3-202ENST00000348639 UTP14AQ9BVJ6 771 aaKnown RBP24.24■■□□□ 1.47
CHRNA3-202ENST00000348639 PDE8BO95263 885 aa24.23■■□□□ 1.47
CHRNA3-202ENST00000348639 HSPD1P10809 573 aaKnown RBP24.23■■□□□ 1.47
CHRNA3-202ENST00000348639 NIP7Q9Y221 180 aaKnown RBP eCLIP24.23■■□□□ 1.47
CHRNA3-202ENST00000348639 MBD3O95983 291 aa24.23■■□□□ 1.47
CHRNA3-202ENST00000348639 ZAP70P43403 619 aa24.23■■□□□ 1.47
CHRNA3-202ENST00000348639 HMGB1P09429 215 aaKnown RBP24.22■■□□□ 1.47
CHRNA3-202ENST00000348639 PDIA4P13667 645 aaKnown RBP24.22■■□□□ 1.47
CHRNA3-202ENST00000348639 ZNF445P59923 1031 aa24.22■■□□□ 1.47
CHRNA3-202ENST00000348639 PTF1AQ7RTS3 328 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms