RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 EFCAB8A8MWE9 144 aa18.27■□□□□ 0.52
LRP8-202ENST00000347547 CCDC73Q6ZRK6 1079 aa18.27■□□□□ 0.52
LRP8-202ENST00000347547 ANKLE2Q86XL3 938 aa18.27■□□□□ 0.52
LRP8-202ENST00000347547 AOPEPQ8N6M6 819 aa18.27■□□□□ 0.52
LRP8-202ENST00000347547 NFATC2IPQ8NCF5 419 aa18.27■□□□□ 0.52
LRP8-202ENST00000347547 NEK11Q8NG66 645 aa18.27■□□□□ 0.52
LRP8-202ENST00000347547 BRF1Q92994 677 aa18.27■□□□□ 0.52
LRP8-202ENST00000347547 KINO60870 393 aaKnown RBP18.27■□□□□ 0.52
LRP8-202ENST00000347547 FAM160A1Q05DH4 1040 aa18.27■□□□□ 0.52
LRP8-202ENST00000347547 GOLPH3LQ9H4A5 285 aa18.27■□□□□ 0.52
LRP8-202ENST00000347547 PSD3Q9NYI0 1048 aa18.27■□□□□ 0.52
LRP8-202ENST00000347547 NWD1Q149M9 1564 aa18.27■□□□□ 0.51
LRP8-202ENST00000347547 SFPQP23246 707 aaKnown RBP eCLIP18.26■□□□□ 0.51
LRP8-202ENST00000347547 COL9A3Q14050 684 aaPredicted RBP18.26■□□□□ 0.51
LRP8-202ENST00000347547 TAF7LQ5H9L4 462 aa18.26■□□□□ 0.51
LRP8-202ENST00000347547 KCNA6P17658 529 aa18.26■□□□□ 0.51
LRP8-202ENST00000347547 NAA16Q6N069 864 aaPredicted RBP18.26■□□□□ 0.51
LRP8-202ENST00000347547 KRBA2Q6ZNG9 492 aa18.26■□□□□ 0.51
LRP8-202ENST00000347547 TRERF1Q96PN7 1200 aa18.26■□□□□ 0.51
LRP8-202ENST00000347547 MED23Q9ULK4 1368 aa18.25■□□□□ 0.51
LRP8-202ENST00000347547 NMIQ13287 307 aaPredicted RBP18.25■□□□□ 0.51
LRP8-202ENST00000347547 ERC1Q8IUD2 1116 aa18.25■□□□□ 0.51
LRP8-202ENST00000347547 SMARCE1Q969G3 411 aa18.25■□□□□ 0.51
LRP8-202ENST00000347547 CWC15Q9P013 229 aaKnown RBP18.25■□□□□ 0.51
LRP8-202ENST00000347547 DNAI1Q9UI46 699 aa18.25■□□□□ 0.51
LRP8-202ENST00000347547 PLEKHG3A1L390 1219 aa18.25■□□□□ 0.51
LRP8-202ENST00000347547 H3BQV1 296 aa18.25■□□□□ 0.51
LRP8-202ENST00000347547 POLR3GO15318 223 aaPredicted RBP18.25■□□□□ 0.51
LRP8-202ENST00000347547 LRRFIP1Q32MZ4 808 aaKnown RBP18.25■□□□□ 0.51
LRP8-202ENST00000347547 IFFO2Q5TF58 517 aa18.25■□□□□ 0.51
LRP8-202ENST00000347547 IQUBQ8NA54 791 aa18.25■□□□□ 0.51
LRP8-202ENST00000347547 JAK2O60674 1132 aa18.24■□□□□ 0.51
LRP8-202ENST00000347547 TBC1D8O95759 1140 aa18.24■□□□□ 0.51
LRP8-202ENST00000347547 MNS1Q8NEH6 495 aa18.24■□□□□ 0.51
LRP8-202ENST00000347547 FAM227BQ96M60 508 aa18.24■□□□□ 0.51
LRP8-202ENST00000347547 NUTM2FA1L443 756 aa18.24■□□□□ 0.51
LRP8-202ENST00000347547 NBPF7P0C2Y1 421 aaPredicted RBP18.24■□□□□ 0.51
LRP8-202ENST00000347547 ST5P78524 1137 aa18.24■□□□□ 0.51
LRP8-202ENST00000347547 KRT32Q14532 448 aa18.24■□□□□ 0.51
LRP8-202ENST00000347547 ZSCAN26Q16670 478 aa18.24■□□□□ 0.51
LRP8-202ENST00000347547 CTR9Q6PD62 1173 aa18.24■□□□□ 0.51
LRP8-202ENST00000347547 TRIM65Q6PJ69 517 aa18.24■□□□□ 0.51
LRP8-202ENST00000347547 SMARCC2Q8TAQ2 1214 aa18.24■□□□□ 0.51
LRP8-202ENST00000347547 NECTIN2Q92692 538 aa18.24■□□□□ 0.51
LRP8-202ENST00000347547 LLPHQ9BRT6 129 aaKnown RBP18.24■□□□□ 0.51
LRP8-202ENST00000347547 MYH15Q9Y2K3 1946 aa18.23■□□□□ 0.51
LRP8-202ENST00000347547 OAS2P29728 719 aaKnown RBP18.23■□□□□ 0.51
LRP8-202ENST00000347547 OS9Q13438 667 aaPredicted RBP18.23■□□□□ 0.51
LRP8-202ENST00000347547 BEND3Q5T5X7 828 aa18.23■□□□□ 0.51
LRP8-202ENST00000347547 GOLGA5Q8TBA6 731 aa18.23■□□□□ 0.51
LRP8-202ENST00000347547 EXOC4Q96A65 974 aa18.23■□□□□ 0.51
LRP8-202ENST00000347547 XPO4Q9C0E2 1151 aaKnown RBP18.23■□□□□ 0.51
LRP8-202ENST00000347547 YY1AP1Q9H869 796 aa18.23■□□□□ 0.51
LRP8-202ENST00000347547 ACEP12821 1306 aa18.23■□□□□ 0.51
LRP8-202ENST00000347547 IGSF1Q8N6C5 1336 aa18.23■□□□□ 0.51
LRP8-202ENST00000347547 IFIT2P09913 472 aaKnown RBP18.23■□□□□ 0.51
LRP8-202ENST00000347547 IRX3P78415 501 aaPredicted RBP18.23■□□□□ 0.51
LRP8-202ENST00000347547 PSME1Q06323 249 aa18.23■□□□□ 0.51
LRP8-202ENST00000347547 CC2D1AQ6P1N0 951 aaPredicted RBP18.23■□□□□ 0.51
LRP8-202ENST00000347547 TMC6Q7Z403 805 aa18.23■□□□□ 0.51
LRP8-202ENST00000347547 SOX12O15370 315 aa18.22■□□□□ 0.51
LRP8-202ENST00000347547 STK3Q13188 491 aa18.22■□□□□ 0.51
LRP8-202ENST00000347547 USPL1Q5W0Q7 1092 aa18.22■□□□□ 0.51
LRP8-202ENST00000347547 FCHSD1Q86WN1 690 aa18.22■□□□□ 0.51
LRP8-202ENST00000347547 HOMER1Q86YM7 354 aa18.22■□□□□ 0.51
LRP8-202ENST00000347547 AK7Q96M32 723 aa18.22■□□□□ 0.51
LRP8-202ENST00000347547 TCEANC2Q96MN5 208 aa18.22■□□□□ 0.51
LRP8-202ENST00000347547 ATG3Q9NT62 314 aa18.22■□□□□ 0.51
LRP8-202ENST00000347547 MYO1CO00159 1063 aa18.22■□□□□ 0.51
LRP8-202ENST00000347547 SASH3O75995 380 aa18.22■□□□□ 0.51
LRP8-202ENST00000347547 SMC1AQ14683 1233 aaKnown RBP18.22■□□□□ 0.51
LRP8-202ENST00000347547 GPR161Q8N6U8 529 aaKnown RBP18.22■□□□□ 0.51
LRP8-202ENST00000347547 FBXO18Q8NFZ0 1043 aa18.22■□□□□ 0.51
LRP8-202ENST00000347547 ZNF396Q96N95 335 aaPredicted RBP18.22■□□□□ 0.51
LRP8-202ENST00000347547 PHAXQ9H814 394 aaKnown RBP18.22■□□□□ 0.51
LRP8-202ENST00000347547 USP6P35125 1406 aa18.21■□□□□ 0.51
LRP8-202ENST00000347547 ANKARQ7Z5J8 1434 aa18.21■□□□□ 0.51
LRP8-202ENST00000347547 ABCC6O95255 1503 aa18.21■□□□□ 0.51
LRP8-202ENST00000347547 GNAT3A8MTJ3 354 aa18.21■□□□□ 0.51
LRP8-202ENST00000347547 NOP2P46087 812 aaKnown RBP18.21■□□□□ 0.51
LRP8-202ENST00000347547 MAPK8IP2Q13387 824 aaPredicted RBP18.21■□□□□ 0.51
LRP8-202ENST00000347547 HDGFL1Q5TGJ6 251 aa18.21■□□□□ 0.51
LRP8-202ENST00000347547 IFNKQ9P0W0 207 aa18.21■□□□□ 0.51
LRP8-202ENST00000347547 RSPH14Q9UHP6 348 aa18.21■□□□□ 0.51
LRP8-202ENST00000347547 MARF1Q9Y4F3 1742 aaKnown RBP18.21■□□□□ 0.5
LRP8-202ENST00000347547 SBNO1A3KN83 1393 aa18.2■□□□□ 0.5
LRP8-202ENST00000347547 PARP3Q9Y6F1 533 aa18.2■□□□□ 0.5
LRP8-202ENST00000347547 TAF6LQ9Y6J9 622 aa18.2■□□□□ 0.5
LRP8-202ENST00000347547 FLT4P35916 1363 aa18.2■□□□□ 0.5
LRP8-202ENST00000347547 A0A0D9SFI3 127 aa18.2■□□□□ 0.5
LRP8-202ENST00000347547 SEC31AO94979 1220 aaKnown RBP18.2■□□□□ 0.5
LRP8-202ENST00000347547 CASQ1P31415 396 aa18.2■□□□□ 0.5
LRP8-202ENST00000347547 TNNT3P45378 269 aaPredicted RBP18.2■□□□□ 0.5
LRP8-202ENST00000347547 TAF7Q15545 349 aaPredicted RBP18.2■□□□□ 0.5
LRP8-202ENST00000347547 REXO1L1PQ8IX06 675 aa18.2■□□□□ 0.5
LRP8-202ENST00000347547 FMR1NBQ8N0W7 255 aaPredicted RBP18.2■□□□□ 0.5
LRP8-202ENST00000347547 FSIP1Q8NA03 581 aa18.2■□□□□ 0.5
LRP8-202ENST00000347547 CCDC191Q8NCU4 936 aa18.2■□□□□ 0.5
LRP8-202ENST00000347547 DDX11Q96FC9 970 aa18.2■□□□□ 0.5
LRP8-202ENST00000347547 USP54Q70EL1 1684 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms