RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 SPAG1Q07617 926 aa26.33■■□□□ 1.81
NPAS3-201ENST00000346562 C20orf194Q5TEA3 1177 aa26.33■■□□□ 1.81
NPAS3-201ENST00000346562 SELENOOQ9BVL4 669 aa26.33■■□□□ 1.81
NPAS3-201ENST00000346562 RRP9O43818 475 aaKnown RBP26.33■■□□□ 1.8
NPAS3-201ENST00000346562 KIF4AO95239 1232 aa26.33■■□□□ 1.8
NPAS3-201ENST00000346562 A0A1W2PRG0 241 aa26.32■■□□□ 1.8
NPAS3-201ENST00000346562 ADCY5O95622 1261 aa26.32■■□□□ 1.8
NPAS3-201ENST00000346562 RBM27Q9P2N5 1060 aaKnown RBP26.32■■□□□ 1.8
NPAS3-201ENST00000346562 ISM2Q6H9L7 571 aa26.32■■□□□ 1.8
NPAS3-201ENST00000346562 MRVI1Q9Y6F6 885 aa26.32■■□□□ 1.8
NPAS3-201ENST00000346562 TNRQ92752 1358 aa26.32■■□□□ 1.8
NPAS3-201ENST00000346562 IQCGQ9H095 443 aaKnown RBP26.32■■□□□ 1.8
NPAS3-201ENST00000346562 MAGEB6P1A0A0J9YX57 407 aa26.31■■□□□ 1.8
NPAS3-201ENST00000346562 CUL7Q14999 1698 aa26.31■■□□□ 1.8
NPAS3-201ENST00000346562 PCF11O94913 1555 aaKnown RBP26.31■■□□□ 1.8
NPAS3-201ENST00000346562 GNAT2P19087 354 aa26.31■■□□□ 1.8
NPAS3-201ENST00000346562 BRF1Q92994 677 aa26.31■■□□□ 1.8
NPAS3-201ENST00000346562 TOM1O60784 492 aa26.31■■□□□ 1.8
NPAS3-201ENST00000346562 PLCG2P16885 1265 aa26.31■■□□□ 1.8
NPAS3-201ENST00000346562 IL15P40933 162 aaPredicted RBP26.31■■□□□ 1.8
NPAS3-201ENST00000346562 C14orf93Q9H972 538 aaKnown RBP26.31■■□□□ 1.8
NPAS3-201ENST00000346562 CHPF2Q9P2E5 772 aa26.31■■□□□ 1.8
NPAS3-201ENST00000346562 POLD1P28340 1107 aa26.31■■□□□ 1.8
NPAS3-201ENST00000346562 MCMDC2Q4G0Z9 681 aa26.31■■□□□ 1.8
NPAS3-201ENST00000346562 C16orf71Q8IYS4 520 aaPredicted RBP26.31■■□□□ 1.8
NPAS3-201ENST00000346562 ALDH1L1O75891 902 aa26.3■■□□□ 1.8
NPAS3-201ENST00000346562 RRP36Q96EU6 259 aaKnown RBP26.3■■□□□ 1.8
NPAS3-201ENST00000346562 JARID2Q92833 1246 aaPredicted RBP26.3■■□□□ 1.8
NPAS3-201ENST00000346562 XAGE3Q8WTP9 111 aa26.3■■□□□ 1.8
NPAS3-201ENST00000346562 ACSBG1Q96GR2 724 aa26.3■■□□□ 1.8
NPAS3-201ENST00000346562 TBC1D2Q9BYX2 928 aa26.3■■□□□ 1.8
NPAS3-201ENST00000346562 AFMP43652 599 aa26.3■■□□□ 1.8
NPAS3-201ENST00000346562 POLR3GO15318 223 aaPredicted RBP26.29■■□□□ 1.8
NPAS3-201ENST00000346562 GDPD2Q9HCC8 539 aa26.29■■□□□ 1.8
NPAS3-201ENST00000346562 NIP7Q9Y221 180 aaKnown RBP eCLIP26.29■■□□□ 1.8
NPAS3-201ENST00000346562 PARP3Q9Y6F1 533 aa26.29■■□□□ 1.8
NPAS3-201ENST00000346562 NPHP3Q7Z494 1330 aa26.29■■□□□ 1.8
NPAS3-201ENST00000346562 SPDYE3A6NKU9 549 aa26.29■■□□□ 1.8
NPAS3-201ENST00000346562 ZSCAN22P10073 491 aaPredicted RBP26.29■■□□□ 1.8
NPAS3-201ENST00000346562 PSMA7O14818 248 aa26.29■■□□□ 1.8
NPAS3-201ENST00000346562 OTUD6BQ8N6M0 293 aa26.29■■□□□ 1.8
NPAS3-201ENST00000346562 FAM83GA6ND36 823 aa26.28■■□□□ 1.8
NPAS3-201ENST00000346562 PLS1Q14651 629 aa26.28■■□□□ 1.8
NPAS3-201ENST00000346562 RAB3IL1Q8TBN0 382 aa26.28■■□□□ 1.8
NPAS3-201ENST00000346562 GNG11P61952 73 aa26.28■■□□□ 1.8
NPAS3-201ENST00000346562 ASIC1P78348 528 aa26.28■■□□□ 1.8
NPAS3-201ENST00000346562 LMBR1Q8WVP7 490 aa26.28■■□□□ 1.8
NPAS3-201ENST00000346562 GTPBP4Q9BZE4 634 aaKnown RBP26.28■■□□□ 1.8
NPAS3-201ENST00000346562 RALGAPBQ86X10 1494 aa26.28■■□□□ 1.8
NPAS3-201ENST00000346562 UBASH3AP57075 661 aa26.27■■□□□ 1.8
NPAS3-201ENST00000346562 MSANTD4Q8NCY6 345 aa26.27■■□□□ 1.8
NPAS3-201ENST00000346562 ARHGAP45Q92619 1136 aa26.27■■□□□ 1.8
NPAS3-201ENST00000346562 AKAP4Q5JQC9 854 aa26.27■■□□□ 1.8
NPAS3-201ENST00000346562 DDX23Q9BUQ8 820 aaKnown RBP26.27■■□□□ 1.8
NPAS3-201ENST00000346562 VEZTQ9HBM0 779 aa26.27■■□□□ 1.8
NPAS3-201ENST00000346562 CEP135Q66GS9 1140 aa26.27■■□□□ 1.8
NPAS3-201ENST00000346562 RGS22Q8NE09 1264 aa26.27■■□□□ 1.8
NPAS3-201ENST00000346562 GRM1Q13255 1194 aa26.27■■□□□ 1.8
NPAS3-201ENST00000346562 CCDC171Q6TFL3 1326 aa26.26■■□□□ 1.8
NPAS3-201ENST00000346562 CCDC77Q9BR77 488 aa26.26■■□□□ 1.79
NPAS3-201ENST00000346562 NSRP1Q9H0G5 558 aaKnown RBP26.26■■□□□ 1.79
NPAS3-201ENST00000346562 ARL1P40616 181 aaPredicted RBP26.26■■□□□ 1.79
NPAS3-201ENST00000346562 SPATA24Q86W54 205 aa26.26■■□□□ 1.79
NPAS3-201ENST00000346562 FAM13AO94988 1023 aa26.26■■□□□ 1.79
NPAS3-201ENST00000346562 LRSAM1Q6UWE0 723 aa26.26■■□□□ 1.79
NPAS3-201ENST00000346562 TCHPQ9BT92 498 aa26.26■■□□□ 1.79
NPAS3-201ENST00000346562 FANCAO15360 1455 aa26.26■■□□□ 1.79
NPAS3-201ENST00000346562 TSHZ3Q63HK5 1081 aa26.26■■□□□ 1.79
NPAS3-201ENST00000346562 EYA3Q99504 573 aa26.26■■□□□ 1.79
NPAS3-201ENST00000346562 CALML3P27482 149 aa26.25■■□□□ 1.79
NPAS3-201ENST00000346562 DDB1Q16531 1140 aa26.25■■□□□ 1.79
NPAS3-201ENST00000346562 PAXBP1Q9Y5B6 917 aa26.25■■□□□ 1.79
NPAS3-201ENST00000346562 MRPS27Q92552 414 aaKnown RBP26.25■■□□□ 1.79
NPAS3-201ENST00000346562 STMN4Q9H169 189 aaPredicted RBP26.25■■□□□ 1.79
NPAS3-201ENST00000346562 ATP2A1O14983 1001 aa26.24■■□□□ 1.79
NPAS3-201ENST00000346562 SLC9C2Q5TAH2 1124 aa26.24■■□□□ 1.79
NPAS3-201ENST00000346562 COPS6Q7L5N1 327 aa26.24■■□□□ 1.79
NPAS3-201ENST00000346562 JDP2Q8WYK2 163 aa26.24■■□□□ 1.79
NPAS3-201ENST00000346562 APBB1IPQ7Z5R6 666 aaPredicted RBP26.24■■□□□ 1.79
NPAS3-201ENST00000346562 ANKRD2Q9GZV1 360 aa26.24■■□□□ 1.79
NPAS3-201ENST00000346562 GRM8O00222 908 aa26.24■■□□□ 1.79
NPAS3-201ENST00000346562 KRT79Q5XKE5 535 aa26.24■■□□□ 1.79
NPAS3-201ENST00000346562 TICAM2Q86XR7 235 aa26.24■■□□□ 1.79
NPAS3-201ENST00000346562 PPFIA3O75145 1194 aa26.24■■□□□ 1.79
NPAS3-201ENST00000346562 CBX1P83916 185 aa26.23■■□□□ 1.79
NPAS3-201ENST00000346562 PLB1Q6P1J6 1458 aa26.23■■□□□ 1.79
NPAS3-201ENST00000346562 IQSEC3Q9UPP2 1182 aaPredicted RBP26.23■■□□□ 1.79
NPAS3-201ENST00000346562 KSR2Q6VAB6 950 aa26.23■■□□□ 1.79
NPAS3-201ENST00000346562 TPTE2Q6XPS3 522 aa26.23■■□□□ 1.79
NPAS3-201ENST00000346562 KRT2P35908 639 aa26.23■■□□□ 1.79
NPAS3-201ENST00000346562 NDC80O14777 642 aa26.23■■□□□ 1.79
NPAS3-201ENST00000346562 Q6ZUG5 572 aa26.23■■□□□ 1.79
NPAS3-201ENST00000346562 GSTA5Q7RTV2 222 aa26.22■■□□□ 1.79
NPAS3-201ENST00000346562 RBM8AQ9Y5S9 174 aaKnown RBP26.22■■□□□ 1.79
NPAS3-201ENST00000346562 DZIP3Q86Y13 1208 aaKnown RBP26.22■■□□□ 1.79
NPAS3-201ENST00000346562 NAP1L4Q99733 375 aaKnown RBP26.22■■□□□ 1.79
NPAS3-201ENST00000346562 BICDL2A1A5D9 508 aa26.22■■□□□ 1.79
NPAS3-201ENST00000346562 UBAP1LF5GYI3 381 aa26.22■■□□□ 1.79
NPAS3-201ENST00000346562 NBPF14Q5TI25 921 aa26.22■■□□□ 1.79
NPAS3-201ENST00000346562 PAG1Q9NWQ8 432 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms