RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 CALML4Q96GE6 196 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 TCEANC2Q96MN5 208 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 SLC26A6Q9BXS9 759 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 TLDC2A0PJX2 215 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 KRT13P13646 458 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 MARCKSP29966 332 aaPredicted RBP8.47□□□□□ -1.05
LMO7-202ENST00000341547 SYCP3Q8IZU3 236 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 GNAT3A8MTJ3 354 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 PSMC4P43686 418 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 TMEM67Q5HYA8 995 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 CFAP58Q5T655 872 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 KRT83P78385 493 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 ZNF569Q5MCW4 686 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 BICDL1Q6ZP65 573 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 FERMT2Q96AC1 680 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 MYD88Q99836 296 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 PIK3C2GO75747 1445 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 EPRSP07814 1512 aaKnown RBP8.47□□□□□ -1.05
LMO7-202ENST00000341547 ARID4AP29374 1257 aaPredicted RBP8.47□□□□□ -1.05
LMO7-202ENST00000341547 TOM1L2Q6ZVM7 507 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 CATIPQ7Z7H3 387 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 ZNF444Q8N0Y2 327 aaPredicted RBP8.47□□□□□ -1.05
LMO7-202ENST00000341547 RGS22Q8NE09 1264 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 NPHP3Q7Z494 1330 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 SPAG1Q07617 926 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 CETN1Q12798 172 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 CCDC25Q86WR0 208 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 NEK1Q96PY6 1258 aa8.47□□□□□ -1.05
LMO7-202ENST00000341547 A0A087WZG4 1122 aa8.46□□□□□ -1.05
LMO7-202ENST00000341547 IARSP41252 1262 aaKnown RBP8.46□□□□□ -1.05
LMO7-202ENST00000341547 IQCGQ9H095 443 aaKnown RBP8.46□□□□□ -1.05
LMO7-202ENST00000341547 RMND1Q9NWS8 449 aa8.46□□□□□ -1.05
LMO7-202ENST00000341547 TMEM110-MUSTN1A8MSY1 372 aa8.46□□□□□ -1.05
LMO7-202ENST00000341547 PTCD1O75127 700 aaKnown RBP8.46□□□□□ -1.05
LMO7-202ENST00000341547 AMPD3Q01432 767 aa8.46□□□□□ -1.05
LMO7-202ENST00000341547 TNIP1Q15025 636 aa8.46□□□□□ -1.05
LMO7-202ENST00000341547 LRCH2Q5VUJ6 765 aa8.46□□□□□ -1.05
LMO7-202ENST00000341547 GUCA1BQ9UMX6 200 aa8.46□□□□□ -1.05
LMO7-202ENST00000341547 IBTKQ9P2D0 1353 aaPredicted RBP8.46□□□□□ -1.05
LMO7-202ENST00000341547 FAM135AQ9P2D6 1515 aa8.46□□□□□ -1.05
LMO7-202ENST00000341547 ATL3Q6DD88 541 aa8.46□□□□□ -1.06
LMO7-202ENST00000341547 C17orf53Q8N3J3 647 aaPredicted RBP8.46□□□□□ -1.06
LMO7-202ENST00000341547 DDX12PQ92771 950 aa8.46□□□□□ -1.06
LMO7-202ENST00000341547 ZNF622Q969S3 477 aaKnown RBP eCLIP8.46□□□□□ -1.06
LMO7-202ENST00000341547 CLSTN2Q9H4D0 955 aa8.46□□□□□ -1.06
LMO7-202ENST00000341547 AKAP2Q9Y2D5 859 aa8.46□□□□□ -1.06
LMO7-202ENST00000341547 TACC1O75410 805 aa8.46□□□□□ -1.06
LMO7-202ENST00000341547 IGHMBP2P38935 993 aaKnown RBP8.46□□□□□ -1.06
LMO7-202ENST00000341547 PPM1FP49593 454 aaPredicted RBP8.46□□□□□ -1.06
LMO7-202ENST00000341547 GRIPAP1Q4V328 841 aa8.46□□□□□ -1.06
LMO7-202ENST00000341547 TMCO4Q5TGY1 634 aa8.46□□□□□ -1.06
LMO7-202ENST00000341547 SPATS2Q86XZ4 545 aaKnown RBP8.46□□□□□ -1.06
LMO7-202ENST00000341547 CCDC63Q8NA47 563 aa8.46□□□□□ -1.06
LMO7-202ENST00000341547 TTC14Q96N46 770 aa8.46□□□□□ -1.06
LMO7-202ENST00000341547 KCNK9Q9NPC2 374 aa8.46□□□□□ -1.06
LMO7-202ENST00000341547 PEG3Q9GZU2 1588 aa8.46□□□□□ -1.06
LMO7-202ENST00000341547 BLMP54132 1417 aaPredicted RBP8.46□□□□□ -1.06
LMO7-202ENST00000341547 METAP2P50579 478 aaKnown RBP eCLIP8.46□□□□□ -1.06
LMO7-202ENST00000341547 SF3A3Q12874 501 aaKnown RBP eCLIP8.46□□□□□ -1.063e-7■■□□□ 13.7
LMO7-202ENST00000341547 IFNKQ9P0W0 207 aa8.46□□□□□ -1.06
LMO7-202ENST00000341547 EIF2AK4Q9P2K8 1649 aaKnown RBP8.46□□□□□ -1.06
LMO7-202ENST00000341547 ELP1O95163 1332 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 HGSO14964 777 aaPredicted RBP8.45□□□□□ -1.06
LMO7-202ENST00000341547 ARL1P40616 181 aaPredicted RBP8.45□□□□□ -1.06
LMO7-202ENST00000341547 LACTBP83111 547 aaPredicted RBP8.45□□□□□ -1.06
LMO7-202ENST00000341547 ZNF692Q9BU19 519 aaPredicted RBP8.45□□□□□ -1.06
LMO7-202ENST00000341547 EXOC1Q9NV70 894 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 ATP8B1O43520 1251 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 PDE1AP54750 535 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 SEPT6Q14141 434 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 LMNTD2Q8IXW0 634 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 PPP1R12CQ9BZL4 782 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 BRD3Q15059 726 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 GPR161Q8N6U8 529 aaKnown RBP8.45□□□□□ -1.06
LMO7-202ENST00000341547 UTP14AQ9BVJ6 771 aaKnown RBP8.45□□□□□ -1.06
LMO7-202ENST00000341547 BUB1BO60566 1050 aaPredicted RBP8.45□□□□□ -1.06
LMO7-202ENST00000341547 KIF5AQ12840 1032 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 ANKRD44Q8N8A2 993 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 TSGA10Q9BZW7 698 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 SYNJ2O15056 1496 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 ACTN2P35609 894 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 RRAGBQ5VZM2 374 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 TSNARE1Q96NA8 513 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 ECHDC1Q9NTX5 307 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 KRT86O43790 486 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 HPDP32754 393 aaPredicted RBP8.45□□□□□ -1.06
LMO7-202ENST00000341547 DDX46Q7L014 1031 aaKnown RBP8.45□□□□□ -1.06
LMO7-202ENST00000341547 SMC6Q96SB8 1091 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 BAG1Q99933 345 aaPredicted RBP8.45□□□□□ -1.06
LMO7-202ENST00000341547 ZNF287Q9HBT7 754 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 SAMD15Q9P1V8 674 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 NUP160Q12769 1436 aa8.45□□□□□ -1.06
LMO7-202ENST00000341547 VIMP08670 466 aaKnown RBP8.44□□□□□ -1.06
LMO7-202ENST00000341547 VAV2P52735 878 aa8.44□□□□□ -1.06
LMO7-202ENST00000341547 GOLGA6CA6NDK9 693 aa8.44□□□□□ -1.06
LMO7-202ENST00000341547 GOLGA6DP0CG33 693 aa8.44□□□□□ -1.06
LMO7-202ENST00000341547 MAP3K12Q12852 859 aa8.44□□□□□ -1.06
LMO7-202ENST00000341547 GSTA5Q7RTV2 222 aa8.44□□□□□ -1.06
LMO7-202ENST00000341547 ANKRD24Q8TF21 1146 aa8.44□□□□□ -1.06
LMO7-202ENST00000341547 GOLGA6AQ9NYA3 693 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms