RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 RRAGCQ9HB90 399 aa24.12■■□□□ 1.45
SYNE4-202ENST00000340477 FZD9O00144 591 aa24.11■■□□□ 1.45
SYNE4-202ENST00000340477 ZNF541Q9H0D2 1346 aa24.1■■□□□ 1.45
SYNE4-202ENST00000340477 UBTFL1P0CB47 393 aaPredicted RBP24.1■■□□□ 1.45
SYNE4-202ENST00000340477 VEGFAP15692 232 aaPredicted RBP24.1■■□□□ 1.45
SYNE4-202ENST00000340477 TBC1D16Q8TBP0 767 aa24.1■■□□□ 1.45
SYNE4-202ENST00000340477 ANKRD2Q9GZV1 360 aa24.1■■□□□ 1.45
SYNE4-202ENST00000340477 USP44Q9H0E7 712 aa24.1■■□□□ 1.45
SYNE4-202ENST00000340477 COL4A5P29400 1685 aa24.09■■□□□ 1.45
SYNE4-202ENST00000340477 G3V3G9 751 aa24.09■■□□□ 1.45
SYNE4-202ENST00000340477 KIF3CO14782 793 aa24.09■■□□□ 1.45
SYNE4-202ENST00000340477 DDNO94850 711 aaPredicted RBP24.09■■□□□ 1.45
SYNE4-202ENST00000340477 TRIM27P14373 513 aa24.09■■□□□ 1.45
SYNE4-202ENST00000340477 ATP2B4P23634 1241 aa24.09■■□□□ 1.45
SYNE4-202ENST00000340477 EPHA10Q5JZY3 1008 aa24.09■■□□□ 1.45
SYNE4-202ENST00000340477 DCAF8Q5TAQ9 597 aa24.09■■□□□ 1.45
SYNE4-202ENST00000340477 GPC2Q8N158 579 aa24.09■■□□□ 1.45
SYNE4-202ENST00000340477 ZC3H12CQ9C0D7 883 aaKnown RBP24.09■■□□□ 1.45
SYNE4-202ENST00000340477 BICC1Q9H694 974 aaKnown RBP24.09■■□□□ 1.45
SYNE4-202ENST00000340477 ZNRF3Q9ULT6 936 aa24.09■■□□□ 1.45
SYNE4-202ENST00000340477 MINPP1Q9UNW1 487 aa24.09■■□□□ 1.45
SYNE4-202ENST00000340477 SCN4AP35499 1836 aa24.09■■□□□ 1.45
SYNE4-202ENST00000340477 IQCA1LA6NCM1 817 aa24.08■■□□□ 1.45
SYNE4-202ENST00000340477 FTSJ3Q8IY81 847 aaKnown RBP24.08■■□□□ 1.45
SYNE4-202ENST00000340477 POLLQ9UGP5 575 aa24.08■■□□□ 1.45
SYNE4-202ENST00000340477 RIMBP2O15034 1052 aa24.07■■□□□ 1.44
SYNE4-202ENST00000340477 INTS3Q68E01 1043 aaKnown RBP24.07■■□□□ 1.44
SYNE4-202ENST00000340477 GJA3Q9Y6H8 435 aa24.07■■□□□ 1.44
SYNE4-202ENST00000340477 KCNJ4P48050 445 aa24.06■■□□□ 1.44
SYNE4-202ENST00000340477 CNNM1Q9NRU3 951 aa24.06■■□□□ 1.44
SYNE4-202ENST00000340477 TOMM70O94826 608 aa24.05■■□□□ 1.44
SYNE4-202ENST00000340477 GNAI3P08754 354 aa24.05■■□□□ 1.44
SYNE4-202ENST00000340477 C1QTNF8P60827 252 aa24.05■■□□□ 1.44
SYNE4-202ENST00000340477 RABL6Q3YEC7 729 aaPredicted RBP24.05■■□□□ 1.44
SYNE4-202ENST00000340477 CLUAP1Q96AJ1 413 aa24.05■■□□□ 1.44
SYNE4-202ENST00000340477 KAZALD1Q96I82 304 aa24.05■■□□□ 1.44
SYNE4-202ENST00000340477 L3MBTL3Q96JM7 780 aaPredicted RBP24.05■■□□□ 1.44
SYNE4-202ENST00000340477 LMOD1P29536 600 aaPredicted RBP24.04■■□□□ 1.44
SYNE4-202ENST00000340477 TNIP1Q15025 636 aa24.04■■□□□ 1.44
SYNE4-202ENST00000340477 LDHAL6AQ6ZMR3 332 aa24.04■■□□□ 1.44
SYNE4-202ENST00000340477 LEMD3Q9Y2U8 911 aa24.04■■□□□ 1.44
SYNE4-202ENST00000340477 A0A1B0GUL6 1792 aa24.03■■□□□ 1.44
SYNE4-202ENST00000340477 CHRNDQ07001 517 aa24.03■■□□□ 1.44
SYNE4-202ENST00000340477 CIAPIN1Q6FI81 312 aa24.03■■□□□ 1.44
SYNE4-202ENST00000340477 DBNDD1Q9H9R9 158 aa24.03■■□□□ 1.44
SYNE4-202ENST00000340477 MED23Q9ULK4 1368 aa24.03■■□□□ 1.44
SYNE4-202ENST00000340477 ECE2O60344 883 aa24.02■■□□□ 1.44
SYNE4-202ENST00000340477 ANKRD44Q8N8A2 993 aa24.02■■□□□ 1.44
SYNE4-202ENST00000340477 RBM46Q8TBY0 533 aaKnown RBP24.02■■□□□ 1.44
SYNE4-202ENST00000340477 ZNF594Q96JF6 807 aaPredicted RBP24.02■■□□□ 1.44
SYNE4-202ENST00000340477 GPR101Q96P66 508 aaPredicted RBP24.02■■□□□ 1.44
SYNE4-202ENST00000340477 HACL1Q9UJ83 578 aa24.02■■□□□ 1.44
SYNE4-202ENST00000340477 MS4A1P11836 297 aa24.01■■□□□ 1.43
SYNE4-202ENST00000340477 DZIP1LQ8IYY4 767 aaKnown RBP24.01■■□□□ 1.43
SYNE4-202ENST00000340477 YTHDC1Q96MU7 727 aaKnown RBP24.01■■□□□ 1.43
SYNE4-202ENST00000340477 ZNF804BA4D1E1 1349 aa24.01■■□□□ 1.43
SYNE4-202ENST00000340477 RAD17O75943 681 aa24■■□□□ 1.43
SYNE4-202ENST00000340477 CXCL9Q07325 125 aa24■■□□□ 1.43
SYNE4-202ENST00000340477 DOK7Q18PE1 504 aa24■■□□□ 1.43
SYNE4-202ENST00000340477 MEIS3Q99687 375 aa24■■□□□ 1.43
SYNE4-202ENST00000340477 RCAN3Q9UKA8 241 aa24■■□□□ 1.43
SYNE4-202ENST00000340477 LRRFIP2Q9Y608 721 aaKnown RBP24■■□□□ 1.43
SYNE4-202ENST00000340477 TMEM57Q8N5G2 664 aa23.98■■□□□ 1.43
SYNE4-202ENST00000340477 SMC1BQ8NDV3 1235 aa23.98■■□□□ 1.43
SYNE4-202ENST00000340477 TNNQ9UQP3 1299 aa23.98■■□□□ 1.43
SYNE4-202ENST00000340477 MROH5Q6ZUA9 1318 aa23.97■■□□□ 1.43
SYNE4-202ENST00000340477 ITPRIPQ8IWB1 547 aa23.97■■□□□ 1.43
SYNE4-202ENST00000340477 YDJCA8MPS7 323 aa23.96■■□□□ 1.43
SYNE4-202ENST00000340477 POTECB2RU33 542 aa23.96■■□□□ 1.43
SYNE4-202ENST00000340477 PLIN1O60240 522 aa23.96■■□□□ 1.43
SYNE4-202ENST00000340477 EPHX2P34913 555 aa23.96■■□□□ 1.43
SYNE4-202ENST00000340477 FSTL1Q12841 308 aa23.96■■□□□ 1.43
SYNE4-202ENST00000340477 PNMA8AQ86V59 439 aaPredicted RBP23.96■■□□□ 1.43
SYNE4-202ENST00000340477 HELBQ8NG08 1087 aaPredicted RBP23.96■■□□□ 1.43
SYNE4-202ENST00000340477 TAF1DQ9H5J8 278 aaPredicted RBP23.96■■□□□ 1.43
SYNE4-202ENST00000340477 PSME4Q14997 1843 aa23.96■■□□□ 1.43
SYNE4-202ENST00000340477 TAF5LO75529 589 aa23.95■■□□□ 1.42
SYNE4-202ENST00000340477 GNAI2P04899 355 aa23.95■■□□□ 1.42
SYNE4-202ENST00000340477 PODNQ7Z5L7 613 aa23.95■■□□□ 1.42
SYNE4-202ENST00000340477 GMPSP49915 693 aaPredicted RBP23.94■■□□□ 1.42
SYNE4-202ENST00000340477 EAPPQ56P03 285 aaPredicted RBP23.94■■□□□ 1.42
SYNE4-202ENST00000340477 METTL24Q5JXM2 366 aa23.94■■□□□ 1.42
SYNE4-202ENST00000340477 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.94■■□□□ 1.42
SYNE4-202ENST00000340477 COA1Q9GZY4 146 aa23.94■■□□□ 1.42
SYNE4-202ENST00000340477 PSMD14O00487 310 aa23.93■■□□□ 1.42
SYNE4-202ENST00000340477 SCNN1DP51172 638 aa23.93■■□□□ 1.42
SYNE4-202ENST00000340477 SCN9AQ15858 1988 aa23.92■■□□□ 1.42
SYNE4-202ENST00000340477 RPS12P25398 132 aaKnown RBP23.92■■□□□ 1.42
SYNE4-202ENST00000340477 ZNF804AQ7Z570 1209 aa23.92■■□□□ 1.42
SYNE4-202ENST00000340477 LDHDQ86WU2 507 aa23.92■■□□□ 1.42
SYNE4-202ENST00000340477 PUS3Q9BZE2 481 aaKnown RBP23.92■■□□□ 1.42
SYNE4-202ENST00000340477 GPRC5DQ9NZD1 345 aa23.92■■□□□ 1.42
SYNE4-202ENST00000340477 CLEC11AQ9Y240 323 aa23.92■■□□□ 1.42
SYNE4-202ENST00000340477 UBE4AQ14139 1066 aa23.91■■□□□ 1.42
SYNE4-202ENST00000340477 FBXO3Q9UK99 471 aa23.91■■□□□ 1.42
SYNE4-202ENST00000340477 RIPOR2Q9Y4F9 1068 aa23.91■■□□□ 1.42
SYNE4-202ENST00000340477 CHADLQ6NUI6 762 aa23.9■■□□□ 1.42
SYNE4-202ENST00000340477 C15orf52Q6ZUT6 534 aaKnown RBP23.9■■□□□ 1.42
SYNE4-202ENST00000340477 KLHDC4Q8TBB5 520 aa23.9■■□□□ 1.42
SYNE4-202ENST00000340477 FBXW7Q969H0 707 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms