RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 LINC00116Q8NCU8 138 aa18.56■□□□□ 0.56
MBD1-203ENST00000339998 PLA2G12BQ9BX93 195 aa18.56■□□□□ 0.56
MBD1-203ENST00000339998 BRPF3Q9ULD4 1205 aa18.56■□□□□ 0.56
MBD1-203ENST00000339998 CAMTA2O94983 1202 aa18.55■□□□□ 0.56
MBD1-203ENST00000339998 NUCB2P80303 420 aa18.55■□□□□ 0.56
MBD1-203ENST00000339998 CCDC83Q8IWF9 413 aa18.55■□□□□ 0.56
MBD1-203ENST00000339998 CWC22Q9HCG8 908 aaKnown RBP18.55■□□□□ 0.56
MBD1-203ENST00000339998 NIP7Q9Y221 180 aaKnown RBP eCLIP18.55■□□□□ 0.56
MBD1-203ENST00000339998 ZKSCAN1P17029 563 aaPredicted RBP18.55■□□□□ 0.56
MBD1-203ENST00000339998 MCM2P49736 904 aa18.55■□□□□ 0.56
MBD1-203ENST00000339998 LRRC2Q9BYS8 371 aa18.55■□□□□ 0.56
MBD1-203ENST00000339998 USP21Q9UK80 565 aa18.55■□□□□ 0.56
MBD1-203ENST00000339998 ANKRD18BA2A2Z9 1011 aa18.54■□□□□ 0.56
MBD1-203ENST00000339998 ZAP70P43403 619 aa18.54■□□□□ 0.56
MBD1-203ENST00000339998 TTC39AQ5SRH9 613 aa18.54■□□□□ 0.56
MBD1-203ENST00000339998 CCDC24Q8N4L8 307 aa18.54■□□□□ 0.56
MBD1-203ENST00000339998 ERVV-1B6SEH8 477 aa18.54■□□□□ 0.56
MBD1-203ENST00000339998 ZSWIM6Q9HCJ5 1215 aa18.54■□□□□ 0.56
MBD1-203ENST00000339998 CYP46A1Q9Y6A2 500 aa18.54■□□□□ 0.56
MBD1-203ENST00000339998 EPB41L2O43491 1005 aaKnown RBP18.54■□□□□ 0.56
MBD1-203ENST00000339998 ST3GAL1Q11201 340 aa18.54■□□□□ 0.56
MBD1-203ENST00000339998 MCMDC2Q4G0Z9 681 aa18.54■□□□□ 0.56
MBD1-203ENST00000339998 GPR108Q9NPR9 543 aa18.54■□□□□ 0.56
MBD1-203ENST00000339998 CDHR2Q9BYE9 1310 aa18.53■□□□□ 0.56
MBD1-203ENST00000339998 RIC1Q4ADV7 1423 aa18.53■□□□□ 0.56
MBD1-203ENST00000339998 PDE8AO60658 829 aa18.53■□□□□ 0.56
MBD1-203ENST00000339998 ATP2B3Q16720 1220 aa18.53■□□□□ 0.56
MBD1-203ENST00000339998 ME3Q16798 604 aa18.53■□□□□ 0.56
MBD1-203ENST00000339998 LIMCH1Q9UPQ0 1083 aa18.53■□□□□ 0.56
MBD1-203ENST00000339998 WTIPA6NIX2 430 aaPredicted RBP18.53■□□□□ 0.56
MBD1-203ENST00000339998 AMIGO3Q86WK7 504 aa18.53■□□□□ 0.56
MBD1-203ENST00000339998 GDPD2Q9HCC8 539 aa18.53■□□□□ 0.56
MBD1-203ENST00000339998 TPCN1Q9ULQ1 816 aa18.53■□□□□ 0.56
MBD1-203ENST00000339998 PRPF40AO75400 957 aaKnown RBP18.52■□□□□ 0.56
MBD1-203ENST00000339998 CYP21A2P08686 494 aa18.52■□□□□ 0.56
MBD1-203ENST00000339998 M0R2C6 588 aa18.52■□□□□ 0.56
MBD1-203ENST00000339998 NCLP19338 710 aaKnown RBP18.52■□□□□ 0.56
MBD1-203ENST00000339998 STK3Q13188 491 aa18.52■□□□□ 0.56
MBD1-203ENST00000339998 VPS72Q15906 364 aa18.52■□□□□ 0.56
MBD1-203ENST00000339998 KCNB2Q92953 911 aa18.52■□□□□ 0.56
MBD1-203ENST00000339998 CCDC158Q5M9N0 1113 aa18.51■□□□□ 0.55
MBD1-203ENST00000339998 TTLL5Q6EMB2 1281 aa18.51■□□□□ 0.55
MBD1-203ENST00000339998 OSBP2Q969R2 916 aa18.51■□□□□ 0.55
MBD1-203ENST00000339998 MCAMP43121 646 aa18.51■□□□□ 0.55
MBD1-203ENST00000339998 C3orf67Q6ZVT6 689 aa18.51■□□□□ 0.55
MBD1-203ENST00000339998 SH3TC1Q8TE82 1336 aa18.5■□□□□ 0.55
MBD1-203ENST00000339998 STOX1Q6ZVD7 989 aa18.5■□□□□ 0.55
MBD1-203ENST00000339998 UTP14AQ9BVJ6 771 aaKnown RBP18.5■□□□□ 0.55
MBD1-203ENST00000339998 MAST3O60307 1309 aa18.5■□□□□ 0.55
MBD1-203ENST00000339998 PHKA1P46020 1223 aa18.5■□□□□ 0.55
MBD1-203ENST00000339998 WASHC4Q2M389 1173 aa18.5■□□□□ 0.55
MBD1-203ENST00000339998 SRP68Q9UHB9 627 aaKnown RBP18.5■□□□□ 0.55
MBD1-203ENST00000339998 NSFL1CQ9UNZ2 370 aaKnown RBP18.5■□□□□ 0.55
MBD1-203ENST00000339998 DDX49Q9Y6V7 483 aaKnown RBP18.5■□□□□ 0.55
MBD1-203ENST00000339998 JCADQ9P266 1359 aa18.5■□□□□ 0.55
MBD1-203ENST00000339998 BRD1O95696 1058 aa18.49■□□□□ 0.55
MBD1-203ENST00000339998 BLOC1S2Q6QNY1 142 aa18.49■□□□□ 0.55
MBD1-203ENST00000339998 VGLL2Q8N8G2 317 aa18.49■□□□□ 0.55
MBD1-203ENST00000339998 AKAP2Q9Y2D5 859 aa18.49■□□□□ 0.55
MBD1-203ENST00000339998 ANKRD36CQ5JPF3 1778 aa18.49■□□□□ 0.55
MBD1-203ENST00000339998 PPFIA3O75145 1194 aa18.49■□□□□ 0.55
MBD1-203ENST00000339998 CHST3Q7LGC8 479 aa18.49■□□□□ 0.55
MBD1-203ENST00000339998 INTS4Q96HW7 963 aaKnown RBP18.49■□□□□ 0.55
MBD1-203ENST00000339998 LMBRD1Q9NUN5 540 aa18.49■□□□□ 0.55
MBD1-203ENST00000339998 RPAP1Q9BWH6 1393 aaPredicted RBP18.48■□□□□ 0.55
MBD1-203ENST00000339998 ZMYM1Q5SVZ6 1142 aa18.48■□□□□ 0.55
MBD1-203ENST00000339998 GAS2L3Q86XJ1 694 aa18.48■□□□□ 0.55
MBD1-203ENST00000339998 FNBP4Q8N3X1 1017 aaPredicted RBP18.48■□□□□ 0.55
MBD1-203ENST00000339998 IL27Q8NEV9 243 aa18.48■□□□□ 0.55
MBD1-203ENST00000339998 COL4A1P02462 1669 aa18.48■□□□□ 0.55
MBD1-203ENST00000339998 NWD2Q9ULI1 1742 aa18.48■□□□□ 0.55
MBD1-203ENST00000339998 MYH3P11055 1940 aa18.48■□□□□ 0.55
MBD1-203ENST00000339998 RNF113AO15541 343 aaKnown RBP18.48■□□□□ 0.55
MBD1-203ENST00000339998 PDE8BO95263 885 aa18.48■□□□□ 0.55
MBD1-203ENST00000339998 NTSR2O95665 410 aa18.48■□□□□ 0.55
MBD1-203ENST00000339998 HAND2P61296 217 aa18.48■□□□□ 0.55
MBD1-203ENST00000339998 TOB2Q14106 344 aaPredicted RBP18.48■□□□□ 0.55
MBD1-203ENST00000339998 PUS7LQ9H0K6 701 aaKnown RBP18.48■□□□□ 0.55
MBD1-203ENST00000339998 HSPD1P10809 573 aaKnown RBP18.47■□□□□ 0.55
MBD1-203ENST00000339998 HSPA1LP34931 641 aa18.47■□□□□ 0.55
MBD1-203ENST00000339998 TM6SF1Q9BZW5 370 aa18.47■□□□□ 0.55
MBD1-203ENST00000339998 RBM27Q9P2N5 1060 aaKnown RBP18.47■□□□□ 0.55
MBD1-203ENST00000339998 RPS6KB1P23443 525 aa18.47■□□□□ 0.55
MBD1-203ENST00000339998 MEX3CQ5U5Q3 659 aaKnown RBP18.47■□□□□ 0.55
MBD1-203ENST00000339998 RNF20Q5VTR2 975 aa18.47■□□□□ 0.55
MBD1-203ENST00000339998 CLEC17AQ6ZS10 378 aa18.47■□□□□ 0.55
MBD1-203ENST00000339998 PANK2Q9BZ23 570 aa18.47■□□□□ 0.55
MBD1-203ENST00000339998 IQSEC3Q9UPP2 1182 aaPredicted RBP18.47■□□□□ 0.55
MBD1-203ENST00000339998 TCHHQ07283 1943 aa18.47■□□□□ 0.55
MBD1-203ENST00000339998 TAF1P21675 1872 aa18.46■□□□□ 0.55
MBD1-203ENST00000339998 GJB2P29033 226 aa18.46■□□□□ 0.55
MBD1-203ENST00000339998 ERFEQ4G0M1 354 aa18.46■□□□□ 0.55
MBD1-203ENST00000339998 USPL1Q5W0Q7 1092 aa18.46■□□□□ 0.55
MBD1-203ENST00000339998 GOLGA6L22H0YM25 854 aa18.46■□□□□ 0.55
MBD1-203ENST00000339998 SMC3Q9UQE7 1217 aa18.46■□□□□ 0.55
MBD1-203ENST00000339998 SYT1P21579 422 aa18.45■□□□□ 0.54
MBD1-203ENST00000339998 CCDC102BQ68D86 513 aa18.45■□□□□ 0.54
MBD1-203ENST00000339998 SMARCC1Q92922 1105 aaPredicted RBP18.45■□□□□ 0.54
MBD1-203ENST00000339998 MPHOSPH8Q99549 860 aa18.45■□□□□ 0.54
MBD1-203ENST00000339998 MYO5AQ9Y4I1 1855 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms