RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 CTIFO43310 598 aaKnown RBP14.34□□□□□ -0.11
BRPF3-201ENST00000339717 NOL3O60936 208 aaKnown RBP14.34□□□□□ -0.11
BRPF3-201ENST00000339717 SLC3A2P08195 630 aaKnown RBP14.34□□□□□ -0.11
BRPF3-201ENST00000339717 RFC1P35251 1148 aaPredicted RBP14.34□□□□□ -0.11
BRPF3-201ENST00000339717 MUM1Q2TAK8 710 aa14.34□□□□□ -0.11
BRPF3-201ENST00000339717 CCDC155Q8N6L0 562 aa14.34□□□□□ -0.11
BRPF3-201ENST00000339717 ITFG2Q969R8 447 aa14.34□□□□□ -0.11
BRPF3-201ENST00000339717 FAF1Q9UNN5 650 aaPredicted RBP14.34□□□□□ -0.11
BRPF3-201ENST00000339717 FGD5Q6ZNL6 1462 aa14.34□□□□□ -0.11
BRPF3-201ENST00000339717 CCDC96Q2M329 555 aa14.34□□□□□ -0.11
BRPF3-201ENST00000339717 APLFQ8IW19 511 aaPredicted RBP14.34□□□□□ -0.11
BRPF3-201ENST00000339717 ABTB1Q969K4 478 aaPredicted RBP14.34□□□□□ -0.11
BRPF3-201ENST00000339717 JADE2Q9NQC1 790 aa14.34□□□□□ -0.11
BRPF3-201ENST00000339717 FAN1Q9Y2M0 1017 aa14.34□□□□□ -0.11
BRPF3-201ENST00000339717 USH1CQ9Y6N9 552 aa14.34□□□□□ -0.11
BRPF3-201ENST00000339717 FERMT3Q86UX7 667 aa14.34□□□□□ -0.11
BRPF3-201ENST00000339717 RAB3IPQ96QF0 476 aaPredicted RBP14.34□□□□□ -0.11
BRPF3-201ENST00000339717 DACT1Q9NYF0 836 aa14.34□□□□□ -0.11
BRPF3-201ENST00000339717 TTC41PQ6P2S7 1318 aa14.33□□□□□ -0.11
BRPF3-201ENST00000339717 HDGFL2Q7Z4V5 671 aaPredicted RBP14.33□□□□□ -0.11
BRPF3-201ENST00000339717 CCDC170Q8IYT3 715 aa14.33□□□□□ -0.11
BRPF3-201ENST00000339717 RABEP2Q9H5N1 569 aa14.33□□□□□ -0.11
BRPF3-201ENST00000339717 STK26Q9P289 416 aa14.33□□□□□ -0.11
BRPF3-201ENST00000339717 F13A1P00488 732 aa14.33□□□□□ -0.12
BRPF3-201ENST00000339717 LAMB3Q13751 1172 aa14.33□□□□□ -0.12
BRPF3-201ENST00000339717 KLHDC4Q8TBB5 520 aa14.33□□□□□ -0.12
BRPF3-201ENST00000339717 CDK5RAP3Q96JB5 506 aa14.33□□□□□ -0.12
BRPF3-201ENST00000339717 MPHOSPH6Q99547 160 aaKnown RBP14.33□□□□□ -0.12
BRPF3-201ENST00000339717 ITGB1BP2Q9UKP3 347 aa14.33□□□□□ -0.12
BRPF3-201ENST00000339717 TRAK1Q9UPV9 953 aa14.33□□□□□ -0.12
BRPF3-201ENST00000339717 RPGRIP1LQ68CZ1 1315 aa14.33□□□□□ -0.12
BRPF3-201ENST00000339717 NPHP3Q7Z494 1330 aa14.33□□□□□ -0.12
BRPF3-201ENST00000339717 CCDC152Q4G0S7 254 aa14.33□□□□□ -0.12
BRPF3-201ENST00000339717 HHATQ5VTY9 493 aa14.33□□□□□ -0.12
BRPF3-201ENST00000339717 CCDC80Q76M96 950 aa14.33□□□□□ -0.12
BRPF3-201ENST00000339717 RPAP2Q8IXW5 612 aaPredicted RBP14.33□□□□□ -0.12
BRPF3-201ENST00000339717 ARHGAP18Q8N392 663 aa14.33□□□□□ -0.12
BRPF3-201ENST00000339717 RPGRIP1Q96KN7 1286 aa14.33□□□□□ -0.12
BRPF3-201ENST00000339717 PRPF4BQ13523 1007 aaKnown RBP14.32□□□□□ -0.12
BRPF3-201ENST00000339717 BICC1Q9H694 974 aaKnown RBP14.32□□□□□ -0.12
BRPF3-201ENST00000339717 RASSF10A6NK89 507 aa14.32□□□□□ -0.12
BRPF3-201ENST00000339717 E7EVH7 732 aa14.32□□□□□ -0.12
BRPF3-201ENST00000339717 NOB1Q9ULX3 412 aaKnown RBP14.32□□□□□ -0.12
BRPF3-201ENST00000339717 IFIT2P09913 472 aaKnown RBP14.32□□□□□ -0.12
BRPF3-201ENST00000339717 ZNF710Q8N1W2 664 aa14.32□□□□□ -0.12
BRPF3-201ENST00000339717 CCDC63Q8NA47 563 aa14.32□□□□□ -0.12
BRPF3-201ENST00000339717 ZNF428Q96B54 188 aa14.32□□□□□ -0.12
BRPF3-201ENST00000339717 ATP2B2Q01814 1243 aa14.32□□□□□ -0.12
BRPF3-201ENST00000339717 ZNF569Q5MCW4 686 aa14.32□□□□□ -0.12
BRPF3-201ENST00000339717 SWT1Q5T5J6 900 aaKnown RBP14.32□□□□□ -0.12
BRPF3-201ENST00000339717 AOPEPQ8N6M6 819 aa14.32□□□□□ -0.12
BRPF3-201ENST00000339717 THEGQ9P2T0 379 aa14.32□□□□□ -0.12
BRPF3-201ENST00000339717 ORC3Q9UBD5 711 aaPredicted RBP14.32□□□□□ -0.12
BRPF3-201ENST00000339717 TROVE2P10155 538 aaKnown RBP eCLIP14.31□□□□□ -0.12
BRPF3-201ENST00000339717 DIXDC1Q155Q3 683 aa14.31□□□□□ -0.12
BRPF3-201ENST00000339717 GNPTABQ3T906 1256 aa14.31□□□□□ -0.12
BRPF3-201ENST00000339717 RUFY4Q6ZNE9 571 aa14.31□□□□□ -0.12
BRPF3-201ENST00000339717 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
BRPF3-201ENST00000339717 NAPGQ99747 312 aaPredicted RBP14.31□□□□□ -0.12
BRPF3-201ENST00000339717 ENO4A6NNW6 628 aa14.31□□□□□ -0.12
BRPF3-201ENST00000339717 ARHGAP6O43182 974 aa14.31□□□□□ -0.12
BRPF3-201ENST00000339717 RNF8O76064 485 aa14.31□□□□□ -0.12
BRPF3-201ENST00000339717 TPP2P29144 1249 aaPredicted RBP14.31□□□□□ -0.12
BRPF3-201ENST00000339717 PDE1CQ14123 709 aaPredicted RBP14.31□□□□□ -0.12
BRPF3-201ENST00000339717 FSIP1Q8NA03 581 aa14.31□□□□□ -0.12
BRPF3-201ENST00000339717 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.31□□□□□ -0.12
BRPF3-201ENST00000339717 ANKRD62A6NC57 917 aa14.31□□□□□ -0.12
BRPF3-201ENST00000339717 TULP2O00295 520 aa14.31□□□□□ -0.12
BRPF3-201ENST00000339717 SEC31AO94979 1220 aaKnown RBP14.31□□□□□ -0.12
BRPF3-201ENST00000339717 SLC8A3P57103 927 aa14.31□□□□□ -0.12
BRPF3-201ENST00000339717 GKAP1Q5VSY0 366 aaPredicted RBP14.31□□□□□ -0.12
BRPF3-201ENST00000339717 POLKQ9UBT6 870 aa14.31□□□□□ -0.12
BRPF3-201ENST00000339717 RARSP54136 660 aaKnown RBP14.3□□□□□ -0.12
BRPF3-201ENST00000339717 TAF11Q15544 211 aa14.3□□□□□ -0.12
BRPF3-201ENST00000339717 BLOC1S2Q6QNY1 142 aa14.3□□□□□ -0.12
BRPF3-201ENST00000339717 APBA1Q02410 837 aa14.3□□□□□ -0.12
BRPF3-201ENST00000339717 INTS8Q75QN2 995 aaKnown RBP14.3□□□□□ -0.12
BRPF3-201ENST00000339717 NUP88Q99567 741 aaPredicted RBP14.3□□□□□ -0.12
BRPF3-201ENST00000339717 PHLPP2Q6ZVD8 1323 aa14.3□□□□□ -0.12
BRPF3-201ENST00000339717 IGF1RP08069 1367 aa14.3□□□□□ -0.12
BRPF3-201ENST00000339717 TCP11L2Q8N4U5 519 aa14.3□□□□□ -0.12
BRPF3-201ENST00000339717 HOMER3Q9NSC5 361 aa14.3□□□□□ -0.12
BRPF3-201ENST00000339717 RNF40O75150 1001 aa14.3□□□□□ -0.12
BRPF3-201ENST00000339717 FLOT1O75955 427 aa14.3□□□□□ -0.12
BRPF3-201ENST00000339717 HNRNPCP07910 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
BRPF3-201ENST00000339717 CDC25BP30305 580 aa14.3□□□□□ -0.12
BRPF3-201ENST00000339717 GNAI1P63096 354 aa14.3□□□□□ -0.12
BRPF3-201ENST00000339717 PHLDB3Q6NSJ2 640 aa14.3□□□□□ -0.12
BRPF3-201ENST00000339717 LRRC8AQ8IWT6 810 aa14.3□□□□□ -0.12
BRPF3-201ENST00000339717 CBX8Q9HC52 389 aa14.3□□□□□ -0.12
BRPF3-201ENST00000339717 UTP6Q9NYH9 597 aaKnown RBP14.3□□□□□ -0.12
BRPF3-201ENST00000339717 SCP2P22307 547 aa14.29□□□□□ -0.12
BRPF3-201ENST00000339717 TMED1Q13445 227 aa14.29□□□□□ -0.12
BRPF3-201ENST00000339717 SEPT2Q15019 361 aa14.29□□□□□ -0.12
BRPF3-201ENST00000339717 GRAMD4Q6IC98 578 aa14.29□□□□□ -0.12
BRPF3-201ENST00000339717 TMEM57Q8N5G2 664 aa14.29□□□□□ -0.12
BRPF3-201ENST00000339717 KLC4Q9NSK0 619 aa14.29□□□□□ -0.12
BRPF3-201ENST00000339717 CLTAP09496 248 aa14.29□□□□□ -0.12
BRPF3-201ENST00000339717 ALDH3A1P30838 453 aa14.29□□□□□ -0.12
BRPF3-201ENST00000339717 HNRNPMP52272 730 aaKnown RBP eCLIP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms