RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 FAM161AQ3B820 660 aa14.24□□□□□ -0.13
SLC28A1-202ENST00000338602 DCAF8Q5TAQ9 597 aa14.24□□□□□ -0.13
SLC28A1-202ENST00000338602 FRAT1Q92837 279 aaPredicted RBP14.24□□□□□ -0.13
SLC28A1-202ENST00000338602 ZC3H12CQ9C0D7 883 aaKnown RBP14.24□□□□□ -0.13
SLC28A1-202ENST00000338602 PODXL2Q9NZ53 605 aa14.24□□□□□ -0.13
SLC28A1-202ENST00000338602 MYH3P11055 1940 aa14.24□□□□□ -0.13
SLC28A1-202ENST00000338602 TIAM2Q8IVF5 1701 aa14.24□□□□□ -0.13
SLC28A1-202ENST00000338602 UTYO14607 1347 aa14.24□□□□□ -0.13
SLC28A1-202ENST00000338602 XDHP47989 1333 aa14.24□□□□□ -0.13
SLC28A1-202ENST00000338602 IQCA1LA6NCM1 817 aa14.23□□□□□ -0.13
SLC28A1-202ENST00000338602 DDNO94850 711 aaPredicted RBP14.23□□□□□ -0.13
SLC28A1-202ENST00000338602 UFL1O94874 794 aa14.23□□□□□ -0.13
SLC28A1-202ENST00000338602 NBPF7P0C2Y1 421 aaPredicted RBP14.23□□□□□ -0.13
SLC28A1-202ENST00000338602 ATP2B4P23634 1241 aa14.23□□□□□ -0.13
SLC28A1-202ENST00000338602 ANKRD2Q9GZV1 360 aa14.23□□□□□ -0.13
SLC28A1-202ENST00000338602 ZNRF3Q9ULT6 936 aa14.23□□□□□ -0.13
SLC28A1-202ENST00000338602 TAF1P21675 1872 aa14.23□□□□□ -0.13
SLC28A1-202ENST00000338602 BCAR3O75815 825 aa14.22□□□□□ -0.13
SLC28A1-202ENST00000338602 ZKSCAN2Q63HK3 967 aa14.22□□□□□ -0.13
SLC28A1-202ENST00000338602 ATF7IPQ6VMQ6 1270 aa14.22□□□□□ -0.13
SLC28A1-202ENST00000338602 SLC51AQ86UW1 340 aa14.22□□□□□ -0.13
SLC28A1-202ENST00000338602 GPC2Q8N158 579 aa14.22□□□□□ -0.13
SLC28A1-202ENST00000338602 TBC1D16Q8TBP0 767 aa14.22□□□□□ -0.13
SLC28A1-202ENST00000338602 SUCLG2Q96I99 432 aa14.22□□□□□ -0.13
SLC28A1-202ENST00000338602 MINPP1Q9UNW1 487 aa14.22□□□□□ -0.13
SLC28A1-202ENST00000338602 RIMBP2O15034 1052 aa14.22□□□□□ -0.13
SLC28A1-202ENST00000338602 UBTFL1P0CB47 393 aaPredicted RBP14.22□□□□□ -0.13
SLC28A1-202ENST00000338602 USP44Q9H0E7 712 aa14.22□□□□□ -0.13
SLC28A1-202ENST00000338602 POLLQ9UGP5 575 aa14.22□□□□□ -0.13
SLC28A1-202ENST00000338602 GJA3Q9Y6H8 435 aa14.22□□□□□ -0.13
SLC28A1-202ENST00000338602 WDR90Q96KV7 1748 aa14.21□□□□□ -0.13
SLC28A1-202ENST00000338602 LRRC37AA6NMS7 1700 aa14.21□□□□□ -0.14
SLC28A1-202ENST00000338602 TNIP1Q15025 636 aa14.21□□□□□ -0.14
SLC28A1-202ENST00000338602 EPHA10Q5JZY3 1008 aa14.21□□□□□ -0.14
SLC28A1-202ENST00000338602 RBM46Q8TBY0 533 aaKnown RBP14.21□□□□□ -0.14
SLC28A1-202ENST00000338602 L3MBTL3Q96JM7 780 aaPredicted RBP14.21□□□□□ -0.14
SLC28A1-202ENST00000338602 CNNM1Q9NRU3 951 aa14.21□□□□□ -0.14
SLC28A1-202ENST00000338602 LEMD3Q9Y2U8 911 aa14.21□□□□□ -0.14
SLC28A1-202ENST00000338602 ZNF541Q9H0D2 1346 aa14.21□□□□□ -0.14
SLC28A1-202ENST00000338602 LMOD1P29536 600 aaPredicted RBP14.2□□□□□ -0.14
SLC28A1-202ENST00000338602 KCNJ4P48050 445 aa14.2□□□□□ -0.14
SLC28A1-202ENST00000338602 INTS3Q68E01 1043 aaKnown RBP14.2□□□□□ -0.14
SLC28A1-202ENST00000338602 LDHAL6AQ6ZMR3 332 aa14.2□□□□□ -0.14
SLC28A1-202ENST00000338602 BICC1Q9H694 974 aaKnown RBP14.2□□□□□ -0.14
SLC28A1-202ENST00000338602 GNAI3P08754 354 aa14.19□□□□□ -0.14
SLC28A1-202ENST00000338602 TRIM27P14373 513 aa14.19□□□□□ -0.14
SLC28A1-202ENST00000338602 RABL6Q3YEC7 729 aaPredicted RBP14.19□□□□□ -0.14
SLC28A1-202ENST00000338602 CIAPIN1Q6FI81 312 aa14.19□□□□□ -0.14
SLC28A1-202ENST00000338602 FTSJ3Q8IY81 847 aaKnown RBP14.19□□□□□ -0.14
SLC28A1-202ENST00000338602 HACL1Q9UJ83 578 aa14.19□□□□□ -0.14
SLC28A1-202ENST00000338602 MS4A1P11836 297 aa14.18□□□□□ -0.14
SLC28A1-202ENST00000338602 CXCL9Q07325 125 aa14.18□□□□□ -0.14
SLC28A1-202ENST00000338602 KAZALD1Q96I82 304 aa14.18□□□□□ -0.14
SLC28A1-202ENST00000338602 ZNF804BA4D1E1 1349 aa14.17□□□□□ -0.14
SLC28A1-202ENST00000338602 ECE2O60344 883 aa14.17□□□□□ -0.14
SLC28A1-202ENST00000338602 HSPA1AP0DMV8 641 aaKnown RBP14.17□□□□□ -0.14
SLC28A1-202ENST00000338602 HSPA1BP0DMV9 641 aaKnown RBP14.17□□□□□ -0.14
SLC28A1-202ENST00000338602 CHRNDQ07001 517 aa14.17□□□□□ -0.14
SLC28A1-202ENST00000338602 FSTL1Q12841 308 aa14.17□□□□□ -0.14
SLC28A1-202ENST00000338602 DOK7Q18PE1 504 aa14.17□□□□□ -0.14
SLC28A1-202ENST00000338602 PNMA8AQ86V59 439 aaPredicted RBP14.17□□□□□ -0.14
SLC28A1-202ENST00000338602 SMC1BQ8NDV3 1235 aa14.17□□□□□ -0.14
SLC28A1-202ENST00000338602 CLUAP1Q96AJ1 413 aa14.17□□□□□ -0.14
SLC28A1-202ENST00000338602 DBNDD1Q9H9R9 158 aa14.17□□□□□ -0.14
SLC28A1-202ENST00000338602 COL4A1P02462 1669 aa14.17□□□□□ -0.14
SLC28A1-202ENST00000338602 DUOX1Q9NRD9 1551 aa14.16□□□□□ -0.14
SLC28A1-202ENST00000338602 POTECB2RU33 542 aa14.16□□□□□ -0.14
SLC28A1-202ENST00000338602 RAD17O75943 681 aa14.16□□□□□ -0.14
SLC28A1-202ENST00000338602 ANKRD44Q8N8A2 993 aa14.16□□□□□ -0.14
SLC28A1-202ENST00000338602 ZNF594Q96JF6 807 aaPredicted RBP14.16□□□□□ -0.14
SLC28A1-202ENST00000338602 GPR101Q96P66 508 aaPredicted RBP14.16□□□□□ -0.14
SLC28A1-202ENST00000338602 MED23Q9ULK4 1368 aa14.15□□□□□ -0.14
SLC28A1-202ENST00000338602 EPHX2P34913 555 aa14.15□□□□□ -0.14
SLC28A1-202ENST00000338602 PODNQ7Z5L7 613 aa14.15□□□□□ -0.14
SLC28A1-202ENST00000338602 DZIP1LQ8IYY4 767 aaKnown RBP14.15□□□□□ -0.14
SLC28A1-202ENST00000338602 TAF1DQ9H5J8 278 aaPredicted RBP14.15□□□□□ -0.14
SLC28A1-202ENST00000338602 COL4A5P29400 1685 aa14.14□□□□□ -0.15
SLC28A1-202ENST00000338602 MROH5Q6ZUA9 1318 aa14.14□□□□□ -0.15
SLC28A1-202ENST00000338602 PLIN1O60240 522 aa14.14□□□□□ -0.15
SLC28A1-202ENST00000338602 EAPPQ56P03 285 aaPredicted RBP14.14□□□□□ -0.15
SLC28A1-202ENST00000338602 MEIS3Q99687 375 aa14.14□□□□□ -0.15
SLC28A1-202ENST00000338602 COA1Q9GZY4 146 aa14.14□□□□□ -0.15
SLC28A1-202ENST00000338602 RCAN3Q9UKA8 241 aa14.14□□□□□ -0.15
SLC28A1-202ENST00000338602 CLEC11AQ9Y240 323 aa14.14□□□□□ -0.15
SLC28A1-202ENST00000338602 LRRFIP2Q9Y608 721 aaKnown RBP14.14□□□□□ -0.15
SLC28A1-202ENST00000338602 SCN4AP35499 1836 aa14.14□□□□□ -0.15
SLC28A1-202ENST00000338602 SPEF2Q9C093 1822 aa14.14□□□□□ -0.15
SLC28A1-202ENST00000338602 LTBP1Q14766 1721 aa14.13□□□□□ -0.15
SLC28A1-202ENST00000338602 YDJCA8MPS7 323 aa14.13□□□□□ -0.15
SLC28A1-202ENST00000338602 H7C1D1 291 aa14.13□□□□□ -0.15
SLC28A1-202ENST00000338602 TAF5LO75529 589 aa14.13□□□□□ -0.15
SLC28A1-202ENST00000338602 GNAI2P04899 355 aa14.13□□□□□ -0.15
SLC28A1-202ENST00000338602 RPS12P25398 132 aaKnown RBP14.13□□□□□ -0.15
SLC28A1-202ENST00000338602 GMPSP49915 693 aaPredicted RBP14.13□□□□□ -0.15
SLC28A1-202ENST00000338602 LDHDQ86WU2 507 aa14.13□□□□□ -0.15
SLC28A1-202ENST00000338602 TMEM57Q8N5G2 664 aa14.13□□□□□ -0.15
SLC28A1-202ENST00000338602 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.13□□□□□ -0.15
SLC28A1-202ENST00000338602 HELBQ8NG08 1087 aaPredicted RBP14.13□□□□□ -0.15
SLC28A1-202ENST00000338602 PSMD14O00487 310 aa14.12□□□□□ -0.15
SLC28A1-202ENST00000338602 SCNN1DP51172 638 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms