RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ZDHHC9Q9Y397 364 aa18.43■□□□□ 0.54
NPHP3-201ENST00000337331 TRAPPC8Q9Y2L5 1435 aa18.43■□□□□ 0.54
NPHP3-201ENST00000337331 IFIT3O14879 490 aaKnown RBP18.43■□□□□ 0.54
NPHP3-201ENST00000337331 DNAJC21Q5F1R6 531 aaKnown RBP18.43■□□□□ 0.54
NPHP3-201ENST00000337331 RPAINQ86UA6 219 aa18.43■□□□□ 0.54
NPHP3-201ENST00000337331 LRRC2Q9BYS8 371 aa18.43■□□□□ 0.54
NPHP3-201ENST00000337331 TRMT112Q9UI30 125 aaKnown RBP18.43■□□□□ 0.54
NPHP3-201ENST00000337331 RBM8AQ9Y5S9 174 aaKnown RBP18.43■□□□□ 0.54
NPHP3-201ENST00000337331 PUF60Q9UHX1 559 aaKnown RBP18.42■□□□□ 0.54
NPHP3-201ENST00000337331 CFAP43Q8NDM7 1665 aa18.42■□□□□ 0.54
NPHP3-201ENST00000337331 PPP2R5AQ15172 486 aa18.42■□□□□ 0.54
NPHP3-201ENST00000337331 LRCH2Q5VUJ6 765 aa18.42■□□□□ 0.54
NPHP3-201ENST00000337331 CNNM3Q8NE01 707 aa18.42■□□□□ 0.54
NPHP3-201ENST00000337331 ZBTB7BO15156 539 aaPredicted RBP18.42■□□□□ 0.54
NPHP3-201ENST00000337331 CTIFO43310 598 aaKnown RBP18.42■□□□□ 0.54
NPHP3-201ENST00000337331 ANKRD13DQ6ZTN6 518 aa18.42■□□□□ 0.54
NPHP3-201ENST00000337331 BMP2KQ9NSY1 1161 aaPredicted RBP18.42■□□□□ 0.54
NPHP3-201ENST00000337331 SLC12A7Q9Y666 1083 aa18.42■□□□□ 0.54
NPHP3-201ENST00000337331 DUOX2Q9NRD8 1548 aa18.42■□□□□ 0.54
NPHP3-201ENST00000337331 PPP2R3AQ06190 1150 aa18.42■□□□□ 0.54
NPHP3-201ENST00000337331 LDHAL6AQ6ZMR3 332 aa18.42■□□□□ 0.54
NPHP3-201ENST00000337331 HMG20BQ9P0W2 317 aa18.42■□□□□ 0.54
NPHP3-201ENST00000337331 PZPP20742 1482 aa18.41■□□□□ 0.54
NPHP3-201ENST00000337331 RANBP6O60518 1105 aaKnown RBP18.41■□□□□ 0.54
NPHP3-201ENST00000337331 MTHFSDQ2M296 383 aaKnown RBP18.41■□□□□ 0.54
NPHP3-201ENST00000337331 LRRC8AQ8IWT6 810 aa18.41■□□□□ 0.54
NPHP3-201ENST00000337331 GOLGA1Q92805 767 aa18.41■□□□□ 0.54
NPHP3-201ENST00000337331 KCNF1Q9H3M0 494 aa18.41■□□□□ 0.54
NPHP3-201ENST00000337331 CHD1O14646 1710 aa18.41■□□□□ 0.54
NPHP3-201ENST00000337331 ERLIN2O94905 339 aa18.4■□□□□ 0.54
NPHP3-201ENST00000337331 MICU3Q86XE3 530 aa18.4■□□□□ 0.54
NPHP3-201ENST00000337331 PUS7Q96PZ0 661 aaKnown RBP18.4■□□□□ 0.54
NPHP3-201ENST00000337331 GOLGA8AA7E2F4 631 aa18.4■□□□□ 0.54
NPHP3-201ENST00000337331 NEBLO76041 1014 aa18.4■□□□□ 0.54
NPHP3-201ENST00000337331 ACTN2P35609 894 aa18.4■□□□□ 0.54
NPHP3-201ENST00000337331 LIG3P49916 1009 aa18.4■□□□□ 0.54
NPHP3-201ENST00000337331 IFNL2Q8IZJ0 200 aa18.4■□□□□ 0.54
NPHP3-201ENST00000337331 RHOXF2BP0C7M4 288 aa18.4■□□□□ 0.54
NPHP3-201ENST00000337331 CPA1P15085 419 aa18.4■□□□□ 0.54
NPHP3-201ENST00000337331 AK2P54819 239 aa18.4■□□□□ 0.54
NPHP3-201ENST00000337331 KIAA1328Q86T90 577 aa18.4■□□□□ 0.54
NPHP3-201ENST00000337331 RHOXF2Q9BQY4 288 aa18.4■□□□□ 0.54
NPHP3-201ENST00000337331 CPLX3Q8WVH0 158 aa18.4■□□□□ 0.54
NPHP3-201ENST00000337331 UTP14AQ9BVJ6 771 aaKnown RBP18.4■□□□□ 0.54
NPHP3-201ENST00000337331 MYO6Q9UM54 1294 aa18.4■□□□□ 0.54
NPHP3-201ENST00000337331 ABCC2Q92887 1545 aa18.39■□□□□ 0.54
NPHP3-201ENST00000337331 KIF5CO60282 957 aa18.39■□□□□ 0.53
NPHP3-201ENST00000337331 CCDC144CPQ8IYA2 1237 aa18.39■□□□□ 0.53
NPHP3-201ENST00000337331 CTCFLQ8NI51 663 aaPredicted RBP18.39■□□□□ 0.53
NPHP3-201ENST00000337331 PA2G4Q9UQ80 394 aaKnown RBP18.39■□□□□ 0.53
NPHP3-201ENST00000337331 GBP2P32456 591 aaPredicted RBP18.39■□□□□ 0.53
NPHP3-201ENST00000337331 IARSP41252 1262 aaKnown RBP18.39■□□□□ 0.53
NPHP3-201ENST00000337331 IFNKQ9P0W0 207 aa18.39■□□□□ 0.53
NPHP3-201ENST00000337331 ANKRD24Q8TF21 1146 aa18.39■□□□□ 0.53
NPHP3-201ENST00000337331 COPS6Q7L5N1 327 aa18.38■□□□□ 0.53
NPHP3-201ENST00000337331 IQCA1Q86XH1 822 aa18.38■□□□□ 0.53
NPHP3-201ENST00000337331 LMOD1P29536 600 aaPredicted RBP18.38■□□□□ 0.53
NPHP3-201ENST00000337331 USP5P45974 858 aa18.38■□□□□ 0.53
NPHP3-201ENST00000337331 ANKRD18BA2A2Z9 1011 aa18.38■□□□□ 0.53
NPHP3-201ENST00000337331 SLC39A6Q13433 755 aa18.38■□□□□ 0.53
NPHP3-201ENST00000337331 XAGE3Q8WTP9 111 aa18.38■□□□□ 0.53
NPHP3-201ENST00000337331 CWC25Q9NXE8 425 aaPredicted RBP18.38■□□□□ 0.53
NPHP3-201ENST00000337331 ARHGEF12Q9NZN5 1544 aa18.38■□□□□ 0.53
NPHP3-201ENST00000337331 GRM8O00222 908 aa18.37■□□□□ 0.53
NPHP3-201ENST00000337331 HSP90AA4PQ58FG1 418 aa18.37■□□□□ 0.53
NPHP3-201ENST00000337331 KRT28Q7Z3Y7 464 aa18.37■□□□□ 0.53
NPHP3-201ENST00000337331 PLEKHA4Q9H4M7 779 aa18.37■□□□□ 0.53
NPHP3-201ENST00000337331 WDR7Q9Y4E6 1490 aa18.37■□□□□ 0.53
NPHP3-201ENST00000337331 NPHP3Q7Z494 1330 aa18.37■□□□□ 0.53
NPHP3-201ENST00000337331 PPIP5K1Q6PFW1 1433 aa18.37■□□□□ 0.53
NPHP3-201ENST00000337331 COL17A1Q9UMD9 1497 aaPredicted RBP18.37■□□□□ 0.53
NPHP3-201ENST00000337331 SNRPA1P09661 255 aaKnown RBP18.37■□□□□ 0.53
NPHP3-201ENST00000337331 HDXQ7Z353 690 aa18.37■□□□□ 0.53
NPHP3-201ENST00000337331 FAM212AQ96EL1 285 aa18.37■□□□□ 0.53
NPHP3-201ENST00000337331 GEMIN8Q9NWZ8 242 aaKnown RBP18.37■□□□□ 0.53
NPHP3-201ENST00000337331 A0A1W2PP64 1363 aa18.37■□□□□ 0.53
NPHP3-201ENST00000337331 ARID5BQ14865 1188 aa18.37■□□□□ 0.53
NPHP3-201ENST00000337331 RAD50Q92878 1312 aa18.37■□□□□ 0.53
NPHP3-201ENST00000337331 CAVIN4Q5BKX8 364 aa18.37■□□□□ 0.53
NPHP3-201ENST00000337331 OTUD6BQ8N6M0 293 aa18.37■□□□□ 0.53
NPHP3-201ENST00000337331 ZSCAN16Q9H4T2 348 aaPredicted RBP18.37■□□□□ 0.53
NPHP3-201ENST00000337331 CEP83Q9Y592 693 aa18.37■□□□□ 0.53
NPHP3-201ENST00000337331 CCDC172P0C7W6 258 aa18.36■□□□□ 0.53
NPHP3-201ENST00000337331 CHRNA2Q15822 529 aa18.36■□□□□ 0.53
NPHP3-201ENST00000337331 FBXO18Q8NFZ0 1043 aa18.36■□□□□ 0.53
NPHP3-201ENST00000337331 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.36■□□□□ 0.53
NPHP3-201ENST00000337331 KARSQ15046 597 aaKnown RBP18.36■□□□□ 0.53
NPHP3-201ENST00000337331 MKNK2Q9HBH9 465 aa18.36■□□□□ 0.53
NPHP3-201ENST00000337331 A2MP01023 1474 aa18.36■□□□□ 0.53
NPHP3-201ENST00000337331 GOLGA6L10A6NI86 522 aa18.36■□□□□ 0.53
NPHP3-201ENST00000337331 NAA25Q14CX7 972 aa18.36■□□□□ 0.53
NPHP3-201ENST00000337331 ZSCAN29Q8IWY8 852 aaPredicted RBP18.36■□□□□ 0.53
NPHP3-201ENST00000337331 MAGI3Q5TCQ9 1506 aa18.35■□□□□ 0.53
NPHP3-201ENST00000337331 NCKAP5LQ9HCH0 1330 aa18.35■□□□□ 0.53
NPHP3-201ENST00000337331 POTEB2H3BUK9 544 aa18.35■□□□□ 0.53
NPHP3-201ENST00000337331 ST5P78524 1137 aa18.35■□□□□ 0.53
NPHP3-201ENST00000337331 SSRP1Q08945 709 aaKnown RBP18.35■□□□□ 0.53
NPHP3-201ENST00000337331 TUBB4AP04350 444 aa18.35■□□□□ 0.53
NPHP3-201ENST00000337331 TMEM67Q5HYA8 995 aa18.35■□□□□ 0.53
NPHP3-201ENST00000337331 KSR2Q6VAB6 950 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms