RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 ZNF330Q9Y3S2 320 aaPredicted RBP8.21□□□□□ -1.09
USP16-201ENST00000334352 VAMP4O75379 141 aa8.21□□□□□ -1.1
USP16-201ENST00000334352 EIF2S2P20042 333 aaKnown RBP8.21□□□□□ -1.1
USP16-201ENST00000334352 GMPSP49915 693 aaPredicted RBP8.21□□□□□ -1.1
USP16-201ENST00000334352 MAP3K11Q16584 847 aa8.21□□□□□ -1.1
USP16-201ENST00000334352 AOC3Q16853 763 aa8.21□□□□□ -1.1
USP16-201ENST00000334352 CST9Q5W186 159 aa8.21□□□□□ -1.1
USP16-201ENST00000334352 TTLL11Q8NHH1 800 aa8.21□□□□□ -1.1
USP16-201ENST00000334352 H7C1D1 291 aa8.21□□□□□ -1.1
USP16-201ENST00000334352 RSBN1LQ6PCB5 846 aaPredicted RBP8.21□□□□□ -1.1
USP16-201ENST00000334352 GGA1Q9UJY5 639 aa8.21□□□□□ -1.1
USP16-201ENST00000334352 WASHC4Q2M389 1173 aa8.2□□□□□ -1.1
USP16-201ENST00000334352 STRIP1Q5VSL9 837 aa8.2□□□□□ -1.1
USP16-201ENST00000334352 RIC3Q7Z5B4 369 aa8.2□□□□□ -1.1
USP16-201ENST00000334352 CCDC24Q8N4L8 307 aa8.2□□□□□ -1.1
USP16-201ENST00000334352 FBXO3Q9UK99 471 aa8.2□□□□□ -1.1
USP16-201ENST00000334352 IL1R1P14778 569 aa8.2□□□□□ -1.1
USP16-201ENST00000334352 EPS15P42566 896 aa8.2□□□□□ -1.1
USP16-201ENST00000334352 GCKRQ14397 625 aa8.2□□□□□ -1.1
USP16-201ENST00000334352 CCDC146Q8IYE0 955 aa8.2□□□□□ -1.1
USP16-201ENST00000334352 CELF1Q92879 486 aaKnown RBP8.2□□□□□ -1.1
USP16-201ENST00000334352 CCDC102AQ96A19 550 aa8.2□□□□□ -1.1
USP16-201ENST00000334352 PTPRCP08575 1304 aa8.2□□□□□ -1.1
USP16-201ENST00000334352 FANCIQ9NVI1 1328 aa8.2□□□□□ -1.1
USP16-201ENST00000334352 FAM155AB1AL88 458 aaPredicted RBP8.19□□□□□ -1.1
USP16-201ENST00000334352 ECE2O60344 883 aa8.19□□□□□ -1.1
USP16-201ENST00000334352 HCLS1P14317 486 aaPredicted RBP8.19□□□□□ -1.1
USP16-201ENST00000334352 HIRAP54198 1017 aaPredicted RBP8.19□□□□□ -1.1
USP16-201ENST00000334352 NEXNQ0ZGT2 675 aa8.19□□□□□ -1.1
USP16-201ENST00000334352 SAPCD2Q86UD0 394 aa8.19□□□□□ -1.1
USP16-201ENST00000334352 ANKRD18AQ8IVF6 992 aa8.19□□□□□ -1.1
USP16-201ENST00000334352 STK31Q9BXU1 1019 aa8.19□□□□□ -1.1
USP16-201ENST00000334352 AKAP11Q9UKA4 1901 aa8.19□□□□□ -1.1
USP16-201ENST00000334352 FAM205AQ6ZU69 1335 aa8.19□□□□□ -1.1
USP16-201ENST00000334352 ZNF316A6NFI3 1004 aaPredicted RBP8.19□□□□□ -1.1
USP16-201ENST00000334352 POTEIP0CG38 1075 aa8.19□□□□□ -1.1
USP16-201ENST00000334352 POTEJP0CG39 1038 aa8.19□□□□□ -1.1
USP16-201ENST00000334352 CAPN2P17655 700 aa8.19□□□□□ -1.1
USP16-201ENST00000334352 TWISTNBQ3B726 338 aaPredicted RBP8.19□□□□□ -1.1
USP16-201ENST00000334352 OLFM4Q6UX06 510 aa8.19□□□□□ -1.1
USP16-201ENST00000334352 CNOT7Q9UIV1 285 aaKnown RBP8.19□□□□□ -1.1
USP16-201ENST00000334352 RPAP1Q9BWH6 1393 aaPredicted RBP8.19□□□□□ -1.1
USP16-201ENST00000334352 ALDH1L2Q3SY69 923 aa8.19□□□□□ -1.1
USP16-201ENST00000334352 RABL6Q3YEC7 729 aaPredicted RBP8.19□□□□□ -1.1
USP16-201ENST00000334352 AIDAQ96BJ3 306 aa8.19□□□□□ -1.1
USP16-201ENST00000334352 PSMD14O00487 310 aa8.18□□□□□ -1.1
USP16-201ENST00000334352 SLC10A3P09131 477 aa8.18□□□□□ -1.1
USP16-201ENST00000334352 FOXO4P98177 505 aa8.18□□□□□ -1.1
USP16-201ENST00000334352 HDLBPQ00341 1268 aaKnown RBP8.18□□□□□ -1.1
USP16-201ENST00000334352 BEND3Q5T5X7 828 aa8.18□□□□□ -1.1
USP16-201ENST00000334352 MYD88Q99836 296 aa8.18□□□□□ -1.1
USP16-201ENST00000334352 PHAXQ9H814 394 aaKnown RBP8.18□□□□□ -1.1
USP16-201ENST00000334352 MAP3K2Q9Y2U5 619 aa8.18□□□□□ -1.1
USP16-201ENST00000334352 SUGT1Q9Y2Z0 365 aa8.18□□□□□ -1.1
USP16-201ENST00000334352 USP17L3A6NCW0 530 aa8.18□□□□□ -1.1
USP16-201ENST00000334352 USP17L4A6NCW7 530 aa8.18□□□□□ -1.1
USP16-201ENST00000334352 NOGQ13253 232 aa8.18□□□□□ -1.1
USP16-201ENST00000334352 KRT24Q2M2I5 525 aa8.18□□□□□ -1.1
USP16-201ENST00000334352 DACT2Q5SW24 774 aa8.18□□□□□ -1.1
USP16-201ENST00000334352 USP17L1Q7RTZ2 530 aa8.18□□□□□ -1.1
USP16-201ENST00000334352 DNAAF4Q8WXU2 420 aa8.18□□□□□ -1.1
USP16-201ENST00000334352 MINPP1Q9UNW1 487 aa8.18□□□□□ -1.1
USP16-201ENST00000334352 PDS5AQ29RF7 1337 aaKnown RBP8.18□□□□□ -1.1
USP16-201ENST00000334352 FOXN1O15353 648 aa8.17□□□□□ -1.1
USP16-201ENST00000334352 FAM89AQ96GI7 184 aa8.17□□□□□ -1.1
USP16-201ENST00000334352 ZNF804BA4D1E1 1349 aa8.17□□□□□ -1.1
USP16-201ENST00000334352 CCER2I3L3R5 266 aa8.17□□□□□ -1.1
USP16-201ENST00000334352 FLIIQ13045 1269 aa8.17□□□□□ -1.1
USP16-201ENST00000334352 CAPNS2Q96L46 248 aa8.17□□□□□ -1.1
USP16-201ENST00000334352 WWC3Q9ULE0 1092 aa8.17□□□□□ -1.1
USP16-201ENST00000334352 MICALL2Q8IY33 904 aa8.16□□□□□ -1.1
USP16-201ENST00000334352 ZC3H12CQ9C0D7 883 aaKnown RBP8.16□□□□□ -1.1
USP16-201ENST00000334352 MAST2Q6P0Q8 1798 aa8.16□□□□□ -1.1
USP16-201ENST00000334352 OTOFQ9HC10 1997 aa8.16□□□□□ -1.1
USP16-201ENST00000334352 ANXA1P04083 346 aa8.16□□□□□ -1.1
USP16-201ENST00000334352 TM4SF4P48230 202 aa8.16□□□□□ -1.1
USP16-201ENST00000334352 APOBEC3FQ8IUX4 373 aaKnown RBP8.16□□□□□ -1.1
USP16-201ENST00000334352 TSPYL6Q8N831 410 aa8.16□□□□□ -1.1
USP16-201ENST00000334352 ZCCHC17Q9NP64 241 aaKnown RBP8.16□□□□□ -1.1
USP16-201ENST00000334352 ZNF219Q9P2Y4 722 aaPredicted RBP8.16□□□□□ -1.1
USP16-201ENST00000334352 COL2A1P02458 1487 aaPredicted RBP8.16□□□□□ -1.1
USP16-201ENST00000334352 TESPA1A2RU30 521 aaPredicted RBP8.16□□□□□ -1.1
USP16-201ENST00000334352 CCT4P50991 539 aaKnown RBP8.16□□□□□ -1.1
USP16-201ENST00000334352 AIMP1Q12904 312 aaKnown RBP8.16□□□□□ -1.1
USP16-201ENST00000334352 PI4KAP2A4QPH2 592 aa8.15□□□□□ -1.1
USP16-201ENST00000334352 ANP32CO43423 234 aa8.15□□□□□ -1.1
USP16-201ENST00000334352 UBE4AQ14139 1066 aa8.15□□□□□ -1.1
USP16-201ENST00000334352 PKN2Q16513 984 aaKnown RBP8.15□□□□□ -1.1
USP16-201ENST00000334352 KIF4BQ2VIQ3 1234 aa8.15□□□□□ -1.1
USP16-201ENST00000334352 FKBP1CQ5VVH2 108 aa8.15□□□□□ -1.1
USP16-201ENST00000334352 PI4KAP1Q8N8J0 262 aa8.15□□□□□ -1.1
USP16-201ENST00000334352 TRPM4Q8TD43 1214 aa8.15□□□□□ -1.1
USP16-201ENST00000334352 MYH13Q9UKX3 1938 aa8.15□□□□□ -1.1
USP16-201ENST00000334352 MAP4K4O95819 1239 aaPredicted RBP8.15□□□□□ -1.11
USP16-201ENST00000334352 LDLRAD1Q5T700 205 aa8.15□□□□□ -1.11
USP16-201ENST00000334352 COL13A1Q5TAT6 717 aaPredicted RBP8.15□□□□□ -1.11
USP16-201ENST00000334352 MAP1SQ66K74 1059 aaPredicted RBP8.15□□□□□ -1.11
USP16-201ENST00000334352 RGMBQ6NW40 437 aa8.15□□□□□ -1.11
USP16-201ENST00000334352 BCL2L13Q9BXK5 485 aa8.15□□□□□ -1.11
USP16-201ENST00000334352 GJA3Q9Y6H8 435 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms