RNA–Protein interactions for RNA: ENST00000330115.3

TMEM44-201, Transcript of transmembrane protein 44, humanhuman

TSL 1 (best) BASIC

Gene TMEM44, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM44-201ENST00000330115 GREM2Q9H772 168 aa20.87■□□□□ 0.93
TMEM44-201ENST00000330115 ITGA6P23229 1130 aa20.86■□□□□ 0.93
TMEM44-201ENST00000330115 RFX5P48382 616 aaPredicted RBP20.85■□□□□ 0.93
TMEM44-201ENST00000330115 FAM161AQ3B820 660 aa20.85■□□□□ 0.93
TMEM44-201ENST00000330115 TAF7LQ5H9L4 462 aa20.85■□□□□ 0.93
TMEM44-201ENST00000330115 IFFO2Q5TF58 517 aa20.85■□□□□ 0.93
TMEM44-201ENST00000330115 B4GALNT3Q6L9W6 998 aa20.85■□□□□ 0.93
TMEM44-201ENST00000330115 OLFM4Q6UX06 510 aa20.85■□□□□ 0.93
TMEM44-201ENST00000330115 DDX46Q7L014 1031 aaKnown RBP20.85■□□□□ 0.93
TMEM44-201ENST00000330115 RPGRQ92834 1020 aaKnown RBP20.85■□□□□ 0.93
TMEM44-201ENST00000330115 CNKSR1Q969H4 720 aa20.85■□□□□ 0.93
TMEM44-201ENST00000330115 MASTLQ96GX5 879 aa20.85■□□□□ 0.93
TMEM44-201ENST00000330115 DCTPP1Q9H773 170 aa20.85■□□□□ 0.93
TMEM44-201ENST00000330115 LTBP3Q9NS15 1303 aa20.84■□□□□ 0.93
TMEM44-201ENST00000330115 SPEF2Q9C093 1822 aa20.84■□□□□ 0.93
TMEM44-201ENST00000330115 PTPN12Q05209 780 aaKnown RBP20.84■□□□□ 0.93
TMEM44-201ENST00000330115 CRY2Q49AN0 593 aa20.84■□□□□ 0.93
TMEM44-201ENST00000330115 SMC1BQ8NDV3 1235 aa20.84■□□□□ 0.93
TMEM44-201ENST00000330115 C7orf43Q8WVR3 580 aa20.84■□□□□ 0.93
TMEM44-201ENST00000330115 RBM17Q96I25 401 aaKnown RBP20.84■□□□□ 0.93
TMEM44-201ENST00000330115 TAOK3Q9H2K8 898 aa20.84■□□□□ 0.93
TMEM44-201ENST00000330115 COPRSQ9NQ92 184 aa20.84■□□□□ 0.93
TMEM44-201ENST00000330115 SURF6O75683 361 aaKnown RBP20.83■□□□□ 0.93
TMEM44-201ENST00000330115 VEGFAP15692 232 aaPredicted RBP20.83■□□□□ 0.93
TMEM44-201ENST00000330115 HSP90AB4PQ58FF6 505 aa20.83■□□□□ 0.93
TMEM44-201ENST00000330115 GCC1Q96CN9 775 aa20.83■□□□□ 0.93
TMEM44-201ENST00000330115 CDC5LQ99459 802 aaKnown RBP20.83■□□□□ 0.93
TMEM44-201ENST00000330115 SEC31BQ9NQW1 1179 aa20.83■□□□□ 0.93
TMEM44-201ENST00000330115 NOP58Q9Y2X3 529 aaKnown RBP20.83■□□□□ 0.93
TMEM44-201ENST00000330115 HOXA10P31260 410 aaPredicted RBP20.82■□□□□ 0.92
TMEM44-201ENST00000330115 G3BP1Q13283 466 aaKnown RBP eCLIP20.82■□□□□ 0.92
TMEM44-201ENST00000330115 ZNF594Q96JF6 807 aaPredicted RBP20.82■□□□□ 0.92
TMEM44-201ENST00000330115 PA2G4Q9UQ80 394 aaKnown RBP20.82■□□□□ 0.92
TMEM44-201ENST00000330115 NPR1P16066 1061 aa20.81■□□□□ 0.92
TMEM44-201ENST00000330115 CENPQQ7L2Z9 268 aaPredicted RBP20.81■□□□□ 0.92
TMEM44-201ENST00000330115 ANKRD18AQ8IVF6 992 aa20.81■□□□□ 0.92
TMEM44-201ENST00000330115 KLHDC4Q8TBB5 520 aa20.81■□□□□ 0.92
TMEM44-201ENST00000330115 KLRG1Q96E93 195 aa20.81■□□□□ 0.92
TMEM44-201ENST00000330115 CRAMP1Q96RY5 1269 aa20.81■□□□□ 0.92
TMEM44-201ENST00000330115 FBXO3Q9UK99 471 aa20.81■□□□□ 0.92
TMEM44-201ENST00000330115 SNED1Q8TER0 1413 aa20.8■□□□□ 0.92
TMEM44-201ENST00000330115 ALDH1B1P30837 517 aa20.8■□□□□ 0.92
TMEM44-201ENST00000330115 IGHMBP2P38935 993 aaKnown RBP20.8■□□□□ 0.92
TMEM44-201ENST00000330115 RPS8P62241 208 aaKnown RBP20.8■□□□□ 0.92
TMEM44-201ENST00000330115 SOGA3Q5TF21 947 aa20.8■□□□□ 0.92
TMEM44-201ENST00000330115 LDHAL6AQ6ZMR3 332 aa20.8■□□□□ 0.92
TMEM44-201ENST00000330115 SLC51AQ86UW1 340 aa20.8■□□□□ 0.92
TMEM44-201ENST00000330115 SMC5Q8IY18 1101 aa20.8■□□□□ 0.92
TMEM44-201ENST00000330115 RAB11FIP3O75154 756 aa20.79■□□□□ 0.92
TMEM44-201ENST00000330115 DDNO94850 711 aaPredicted RBP20.79■□□□□ 0.92
TMEM44-201ENST00000330115 POTEIP0CG38 1075 aa20.79■□□□□ 0.92
TMEM44-201ENST00000330115 POTEJP0CG39 1038 aa20.79■□□□□ 0.92
TMEM44-201ENST00000330115 OS9Q13438 667 aaPredicted RBP20.79■□□□□ 0.92
TMEM44-201ENST00000330115 MPHOSPH8Q99549 860 aa20.79■□□□□ 0.92
TMEM44-201ENST00000330115 SIL1Q9H173 461 aa20.79■□□□□ 0.92
TMEM44-201ENST00000330115 EXOC6BQ9Y2D4 811 aa20.79■□□□□ 0.92
TMEM44-201ENST00000330115 EYA2O00167 538 aa20.78■□□□□ 0.92
TMEM44-201ENST00000330115 CIAO1O76071 339 aa20.78■□□□□ 0.92
TMEM44-201ENST00000330115 GRAPQ13588 217 aa20.78■□□□□ 0.92
TMEM44-201ENST00000330115 GRAPLQ8TC17 118 aaPredicted RBP20.78■□□□□ 0.92
TMEM44-201ENST00000330115 CNNM1Q9NRU3 951 aa20.78■□□□□ 0.92
TMEM44-201ENST00000330115 COL4A5P29400 1685 aa20.77■□□□□ 0.92
TMEM44-201ENST00000330115 BBOX1O75936 387 aa20.77■□□□□ 0.92
TMEM44-201ENST00000330115 CCDC93Q567U6 631 aa20.77■□□□□ 0.92
TMEM44-201ENST00000330115 ERC1Q8IUD2 1116 aa20.77■□□□□ 0.92
TMEM44-201ENST00000330115 JMYQ8N9B5 988 aa20.77■□□□□ 0.92
TMEM44-201ENST00000330115 CELF1Q92879 486 aaKnown RBP20.77■□□□□ 0.92
TMEM44-201ENST00000330115 PUS3Q9BZE2 481 aaKnown RBP20.77■□□□□ 0.92
TMEM44-201ENST00000330115 BSDC1Q9NW68 430 aaPredicted RBP20.77■□□□□ 0.92
TMEM44-201ENST00000330115 IL15P40933 162 aaPredicted RBP20.76■□□□□ 0.91
TMEM44-201ENST00000330115 LRRC24Q50LG9 513 aa20.76■□□□□ 0.91
TMEM44-201ENST00000330115 DPY19L2Q6NUT2 758 aa20.76■□□□□ 0.91
TMEM44-201ENST00000330115 ATG9AQ7Z3C6 839 aa20.76■□□□□ 0.91
TMEM44-201ENST00000330115 ZBTB47Q9UFB7 747 aaPredicted RBP20.76■□□□□ 0.91
TMEM44-201ENST00000330115 RIPOR2Q9Y4F9 1068 aa20.76■□□□□ 0.91
TMEM44-201ENST00000330115 ZNF541Q9H0D2 1346 aa20.76■□□□□ 0.91
TMEM44-201ENST00000330115 TMC4Q7Z404 712 aa20.75■□□□□ 0.91
TMEM44-201ENST00000330115 KIF1BPQ96EK5 621 aa20.75■□□□□ 0.91
TMEM44-201ENST00000330115 ZNF277Q9NRM2 450 aaPredicted RBP20.75■□□□□ 0.91
TMEM44-201ENST00000330115 APBB1O00213 710 aa20.74■□□□□ 0.91
TMEM44-201ENST00000330115 FKBP4Q02790 459 aaKnown RBP eCLIP20.74■□□□□ 0.91
TMEM44-201ENST00000330115 ANKRD45Q5TZF3 282 aa20.74■□□□□ 0.91
TMEM44-201ENST00000330115 LRRCC1Q9C099 1032 aa20.74■□□□□ 0.91
TMEM44-201ENST00000330115 SCN4AP35499 1836 aa20.74■□□□□ 0.91
TMEM44-201ENST00000330115 COL4A1P02462 1669 aa20.73■□□□□ 0.91
TMEM44-201ENST00000330115 PCNTO95613 3336 aa20.73■□□□□ 0.91
TMEM44-201ENST00000330115 SASH1O94885 1247 aa20.73■□□□□ 0.91
TMEM44-201ENST00000330115 RHPN1Q8TCX5 695 aa20.73■□□□□ 0.91
TMEM44-201ENST00000330115 CEP126Q9P2H0 1117 aa20.73■□□□□ 0.91
TMEM44-201ENST00000330115 MROH5Q6ZUA9 1318 aa20.73■□□□□ 0.91
TMEM44-201ENST00000330115 ADAMTSL1Q8N6G6 1762 aa20.72■□□□□ 0.91
TMEM44-201ENST00000330115 NUCB1Q02818 461 aa20.72■□□□□ 0.91
TMEM44-201ENST00000330115 TFCP2Q12800 502 aa20.71■□□□□ 0.91
TMEM44-201ENST00000330115 GRIPAP1Q4V328 841 aa20.71■□□□□ 0.91
TMEM44-201ENST00000330115 METTL24Q5JXM2 366 aa20.71■□□□□ 0.91
TMEM44-201ENST00000330115 TMX4Q9H1E5 349 aaPredicted RBP20.71■□□□□ 0.91
TMEM44-201ENST00000330115 MINPP1Q9UNW1 487 aa20.71■□□□□ 0.91
TMEM44-201ENST00000330115 A0A1B0GUL6 1792 aa20.71■□□□□ 0.91
TMEM44-201ENST00000330115 PPEF1O14829 653 aaPredicted RBP20.7■□□□□ 0.9
TMEM44-201ENST00000330115 CC2D2BQ6DHV5 1058 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms