RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 GGA1Q9UJY5 639 aa6.36□□□□□ -1.39
LRIT3-201ENST00000327908 SUGT1Q9Y2Z0 365 aa6.36□□□□□ -1.39
LRIT3-201ENST00000327908 MED23Q9ULK4 1368 aa6.36□□□□□ -1.39
LRIT3-201ENST00000327908 CAVIN4Q5BKX8 364 aa6.36□□□□□ -1.39
LRIT3-201ENST00000327908 LDHAL6AQ6ZMR3 332 aa6.36□□□□□ -1.39
LRIT3-201ENST00000327908 ZNF622Q969S3 477 aaKnown RBP eCLIP6.36□□□□□ -1.39
LRIT3-201ENST00000327908 ZNF609O15014 1411 aa6.36□□□□□ -1.39
LRIT3-201ENST00000327908 METTL24Q5JXM2 366 aa6.35□□□□□ -1.39
LRIT3-201ENST00000327908 SPTY2D1Q68D10 685 aaPredicted RBP6.35□□□□□ -1.39
LRIT3-201ENST00000327908 MSL1Q68DK7 614 aa6.35□□□□□ -1.39
LRIT3-201ENST00000327908 IL27Q8NEV9 243 aa6.35□□□□□ -1.39
LRIT3-201ENST00000327908 DCTPP1Q9H773 170 aa6.35□□□□□ -1.39
LRIT3-201ENST00000327908 ATF5Q9Y2D1 282 aaPredicted RBP6.35□□□□□ -1.39
LRIT3-201ENST00000327908 G3V3G9 751 aa6.35□□□□□ -1.39
LRIT3-201ENST00000327908 FKBP4Q02790 459 aaKnown RBP eCLIP6.35□□□□□ -1.39
LRIT3-201ENST00000327908 DCAF8Q5TAQ9 597 aa6.35□□□□□ -1.39
LRIT3-201ENST00000327908 TBC1D22AQ8WUA7 517 aa6.35□□□□□ -1.39
LRIT3-201ENST00000327908 LPIN2Q92539 896 aa6.35□□□□□ -1.39
LRIT3-201ENST00000327908 CCDC136Q96JN2 1154 aa6.35□□□□□ -1.39
LRIT3-201ENST00000327908 ZNF512BQ96KM6 892 aaPredicted RBP6.35□□□□□ -1.39
LRIT3-201ENST00000327908 RTFDC1Q9BY42 306 aaPredicted RBP6.35□□□□□ -1.39
LRIT3-201ENST00000327908 LRRCC1Q9C099 1032 aa6.35□□□□□ -1.39
LRIT3-201ENST00000327908 RFX7Q2KHR2 1363 aa6.35□□□□□ -1.39
LRIT3-201ENST00000327908 TTC41PQ6P2S7 1318 aa6.35□□□□□ -1.39
LRIT3-201ENST00000327908 PSDA5PKW4 1024 aaPredicted RBP6.35□□□□□ -1.39
LRIT3-201ENST00000327908 MPNDQ8N594 471 aa6.35□□□□□ -1.39
LRIT3-201ENST00000327908 ANKRD31Q8N7Z5 1873 aa6.35□□□□□ -1.39
LRIT3-201ENST00000327908 HIP1O00291 1037 aa6.34□□□□□ -1.39
LRIT3-201ENST00000327908 HCLS1P14317 486 aaPredicted RBP6.34□□□□□ -1.39
LRIT3-201ENST00000327908 TTF1Q15361 905 aaPredicted RBP6.34□□□□□ -1.39
LRIT3-201ENST00000327908 CCDC158Q5M9N0 1113 aa6.34□□□□□ -1.39
LRIT3-201ENST00000327908 POTEDQ86YR6 584 aa6.34□□□□□ -1.39
LRIT3-201ENST00000327908 SPEF2Q9C093 1822 aa6.34□□□□□ -1.39
LRIT3-201ENST00000327908 SENP3-EIF4A1A0A087X0R7 540 aa6.34□□□□□ -1.39
LRIT3-201ENST00000327908 SURF6O75683 361 aaKnown RBP6.34□□□□□ -1.39
LRIT3-201ENST00000327908 NBPF7P0C2Y1 421 aaPredicted RBP6.34□□□□□ -1.39
LRIT3-201ENST00000327908 RLBP1P12271 317 aa6.34□□□□□ -1.39
LRIT3-201ENST00000327908 ZSCAN25Q6NSZ9 544 aa6.34□□□□□ -1.39
LRIT3-201ENST00000327908 DPP8Q6V1X1 898 aaPredicted RBP6.34□□□□□ -1.39
LRIT3-201ENST00000327908 SMC5Q8IY18 1101 aa6.34□□□□□ -1.39
LRIT3-201ENST00000327908 COA1Q9GZY4 146 aa6.34□□□□□ -1.39
LRIT3-201ENST00000327908 IFIT2P09913 472 aaKnown RBP6.34□□□□□ -1.4
LRIT3-201ENST00000327908 NT5C2P49902 561 aa6.34□□□□□ -1.4
LRIT3-201ENST00000327908 FAM161AQ3B820 660 aa6.34□□□□□ -1.4
LRIT3-201ENST00000327908 GORABQ5T7V8 394 aa6.34□□□□□ -1.4
LRIT3-201ENST00000327908 ARAP2Q8WZ64 1704 aa6.34□□□□□ -1.4
LRIT3-201ENST00000327908 DPEP1P16444 411 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 PRPF40BQ6NWY9 871 aaKnown RBP6.33□□□□□ -1.4
LRIT3-201ENST00000327908 NUTM1Q86Y26 1132 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 TAOK3Q9H2K8 898 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 DENND2AQ9ULE3 1009 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 TNRC6CQ9HCJ0 1690 aaKnown RBP6.33□□□□□ -1.4
LRIT3-201ENST00000327908 FAM177BA6PVY3 158 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 RPS12P25398 132 aaKnown RBP6.33□□□□□ -1.4
LRIT3-201ENST00000327908 RFX5P48382 616 aaPredicted RBP6.33□□□□□ -1.4
LRIT3-201ENST00000327908 GSTO1P78417 241 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 TNIP1Q15025 636 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 ATP2B3Q16720 1220 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 GREM2Q9H772 168 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 PLIN1O60240 522 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 PDE8BO95263 885 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 PTPN12Q05209 780 aaKnown RBP6.33□□□□□ -1.4
LRIT3-201ENST00000327908 CASC1Q6TDU7 716 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 VPS37DQ86XT2 251 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 NIM1KQ8IY84 436 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 WDR66Q8TBY9 1149 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 JDP2Q8WYK2 163 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 ZC3H12CQ9C0D7 883 aaKnown RBP6.33□□□□□ -1.4
LRIT3-201ENST00000327908 ANKIB1Q9P2G1 1089 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 KIAA1551Q9HCM1 1747 aa6.33□□□□□ -1.4
LRIT3-201ENST00000327908 LDHCP07864 332 aa6.32□□□□□ -1.4
LRIT3-201ENST00000327908 PODNQ7Z5L7 613 aa6.32□□□□□ -1.4
LRIT3-201ENST00000327908 RIPOR2Q9Y4F9 1068 aa6.32□□□□□ -1.4
LRIT3-201ENST00000327908 COL11A2P13942 1736 aaPredicted RBP6.32□□□□□ -1.4
LRIT3-201ENST00000327908 GLRX3O76003 335 aaKnown RBP6.32□□□□□ -1.4
LRIT3-201ENST00000327908 MFAP1P55081 439 aaKnown RBP6.32□□□□□ -1.4
LRIT3-201ENST00000327908 EXOC6Q8TAG9 804 aa6.32□□□□□ -1.4
LRIT3-201ENST00000327908 ZNF804BA4D1E1 1349 aa6.32□□□□□ -1.4
LRIT3-201ENST00000327908 ZFYP08048 801 aaPredicted RBP6.32□□□□□ -1.4
LRIT3-201ENST00000327908 EIF6P56537 245 aaKnown RBP6.32□□□□□ -1.4
LRIT3-201ENST00000327908 AMIGO3Q86WK7 504 aa6.32□□□□□ -1.4
LRIT3-201ENST00000327908 RHPN1Q8TCX5 695 aa6.32□□□□□ -1.4
LRIT3-201ENST00000327908 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.32□□□□□ -1.4
LRIT3-201ENST00000327908 HDAC9Q9UKV0 1011 aa6.32□□□□□ -1.4
LRIT3-201ENST00000327908 BRCA1P38398 1863 aaKnown RBP6.31□□□□□ -1.4
LRIT3-201ENST00000327908 UFL1O94874 794 aa6.31□□□□□ -1.4
LRIT3-201ENST00000327908 LMNB1P20700 586 aa6.31□□□□□ -1.4
LRIT3-201ENST00000327908 CHRNDQ07001 517 aa6.31□□□□□ -1.4
LRIT3-201ENST00000327908 NOL10Q9BSC4 688 aaKnown RBP6.31□□□□□ -1.4
LRIT3-201ENST00000327908 SYT17Q9BSW7 474 aa6.31□□□□□ -1.4
LRIT3-201ENST00000327908 MINPP1Q9UNW1 487 aa6.31□□□□□ -1.4
LRIT3-201ENST00000327908 HDLBPQ00341 1268 aaKnown RBP6.31□□□□□ -1.4
LRIT3-201ENST00000327908 KIAA2012Q0VF49 1180 aa6.31□□□□□ -1.4
LRIT3-201ENST00000327908 TTC39AQ5SRH9 613 aa6.31□□□□□ -1.4
LRIT3-201ENST00000327908 FHDC1Q9C0D6 1143 aaPredicted RBP6.31□□□□□ -1.4
LRIT3-201ENST00000327908 SALL1Q9NSC2 1324 aa6.31□□□□□ -1.4
LRIT3-201ENST00000327908 PLCG2P16885 1265 aa6.31□□□□□ -1.4
LRIT3-201ENST00000327908 KLHL34Q8N239 644 aa6.31□□□□□ -1.4
LRIT3-201ENST00000327908 RPAP1Q9BWH6 1393 aaPredicted RBP6.3□□□□□ -1.4
LRIT3-201ENST00000327908 C6orf229H3BNL8 230 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms