RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 TTLL7Q6ZT98 887 aa17.72■□□□□ 0.43
VARS2-201ENST00000321897 TMC6Q7Z403 805 aa17.72■□□□□ 0.43
VARS2-201ENST00000321897 TET3O43151 1660 aa17.71■□□□□ 0.43
VARS2-201ENST00000321897 BRD1O95696 1058 aa17.71■□□□□ 0.43
VARS2-201ENST00000321897 CPLX3Q8WVH0 158 aa17.71■□□□□ 0.43
VARS2-201ENST00000321897 FAM193AP78312 1265 aa17.71■□□□□ 0.43
VARS2-201ENST00000321897 SNW1Q13573 536 aaKnown RBP17.71■□□□□ 0.43
VARS2-201ENST00000321897 TRIM22Q8IYM9 498 aa17.71■□□□□ 0.43
VARS2-201ENST00000321897 OGFRQ9NZT2 677 aa17.71■□□□□ 0.43
VARS2-201ENST00000321897 CHGBP05060 677 aa17.71■□□□□ 0.43
VARS2-201ENST00000321897 GCKRQ14397 625 aa17.71■□□□□ 0.43
VARS2-201ENST00000321897 MIGA1Q8NAN2 632 aa17.71■□□□□ 0.43
VARS2-201ENST00000321897 TTC41PQ6P2S7 1318 aa17.7■□□□□ 0.42
VARS2-201ENST00000321897 A0A1B0GVL5 298 aa17.7■□□□□ 0.42
VARS2-201ENST00000321897 ELF2Q15723 593 aa17.7■□□□□ 0.42
VARS2-201ENST00000321897 ATP2B3Q16720 1220 aa17.7■□□□□ 0.42
VARS2-201ENST00000321897 TNNI3KQ59H18 835 aa17.7■□□□□ 0.42
VARS2-201ENST00000321897 AXDND1Q5T1B0 1012 aaPredicted RBP17.7■□□□□ 0.42
VARS2-201ENST00000321897 FPGT-TNNI3KV9GXZ4 949 aa17.7■□□□□ 0.42
VARS2-201ENST00000321897 KIAA0232Q92628 1395 aa17.69■□□□□ 0.42
VARS2-201ENST00000321897 SPHKAPQ2M3C7 1700 aa17.69■□□□□ 0.42
VARS2-201ENST00000321897 A0A1B0GUL7 405 aa17.69■□□□□ 0.42
VARS2-201ENST00000321897 H0YHG0 523 aa17.69■□□□□ 0.42
VARS2-201ENST00000321897 MYL10Q9BUA6 226 aa17.69■□□□□ 0.42
VARS2-201ENST00000321897 TPCN1Q9ULQ1 816 aa17.69■□□□□ 0.42
VARS2-201ENST00000321897 TULP4Q9NRJ4 1543 aa17.69■□□□□ 0.42
VARS2-201ENST00000321897 PTPDC1A2A3K4 754 aa17.69■□□□□ 0.42
VARS2-201ENST00000321897 ZBTB22O15209 634 aa17.69■□□□□ 0.42
VARS2-201ENST00000321897 INTS4Q96HW7 963 aaKnown RBP17.69■□□□□ 0.42
VARS2-201ENST00000321897 SLC26A6Q9BXS9 759 aa17.69■□□□□ 0.42
VARS2-201ENST00000321897 DNAI1Q9UI46 699 aa17.69■□□□□ 0.42
VARS2-201ENST00000321897 NACAP1Q9BZK3 213 aa17.69■□□□□ 0.42
VARS2-201ENST00000321897 C10orf67Q8IYJ2 551 aa17.68■□□□□ 0.42
VARS2-201ENST00000321897 C19orf44Q9H6X5 657 aa17.68■□□□□ 0.42
VARS2-201ENST00000321897 IGSF1Q8N6C5 1336 aa17.68■□□□□ 0.42
VARS2-201ENST00000321897 ANKRD18BA2A2Z9 1011 aa17.68■□□□□ 0.42
VARS2-201ENST00000321897 ZNF589Q86UQ0 364 aaPredicted RBP17.68■□□□□ 0.42
VARS2-201ENST00000321897 GPATCH11Q8N954 259 aa17.68■□□□□ 0.42
VARS2-201ENST00000321897 IBTKQ9P2D0 1353 aaPredicted RBP17.68■□□□□ 0.42
VARS2-201ENST00000321897 LIG1P18858 919 aa17.68■□□□□ 0.42
VARS2-201ENST00000321897 AKAP2Q9Y2D5 859 aa17.68■□□□□ 0.42
VARS2-201ENST00000321897 PAXBP1Q9Y5B6 917 aa17.68■□□□□ 0.42
VARS2-201ENST00000321897 LMOD1P29536 600 aaPredicted RBP17.67■□□□□ 0.42
VARS2-201ENST00000321897 BMS1Q14692 1282 aaKnown RBP17.67■□□□□ 0.42
VARS2-201ENST00000321897 NAA30Q147X3 362 aaPredicted RBP17.67■□□□□ 0.42
VARS2-201ENST00000321897 IL25Q9H293 177 aa17.67■□□□□ 0.42
VARS2-201ENST00000321897 GOLGA8AA7E2F4 631 aa17.67■□□□□ 0.42
VARS2-201ENST00000321897 TMEM67Q5HYA8 995 aa17.67■□□□□ 0.42
VARS2-201ENST00000321897 AXIN2Q9Y2T1 843 aa17.67■□□□□ 0.42
VARS2-201ENST00000321897 NEO1Q92859 1461 aa17.67■□□□□ 0.42
VARS2-201ENST00000321897 TPM1P09493 284 aa17.67■□□□□ 0.42
VARS2-201ENST00000321897 CERS3Q8IU89 383 aa17.67■□□□□ 0.42
VARS2-201ENST00000321897 RNF216Q9NWF9 866 aaPredicted RBP17.67■□□□□ 0.42
VARS2-201ENST00000321897 GLI2P10070 1586 aa17.67■□□□□ 0.42
VARS2-201ENST00000321897 CADPS2Q86UW7 1296 aa17.67■□□□□ 0.42
VARS2-201ENST00000321897 USP6P35125 1406 aa17.66■□□□□ 0.42
VARS2-201ENST00000321897 NEURL1BA8MQ27 555 aa17.66■□□□□ 0.42
VARS2-201ENST00000321897 SMTNL1A8MU46 457 aa17.66■□□□□ 0.42
VARS2-201ENST00000321897 PRC1O43663 620 aa17.66■□□□□ 0.42
VARS2-201ENST00000321897 IGHMBP2P38935 993 aaKnown RBP17.66■□□□□ 0.42
VARS2-201ENST00000321897 TSR1Q2NL82 804 aaKnown RBP17.66■□□□□ 0.42
VARS2-201ENST00000321897 LRRC24Q50LG9 513 aa17.66■□□□□ 0.42
VARS2-201ENST00000321897 ARHGAP29Q52LW3 1261 aa17.66■□□□□ 0.42
VARS2-201ENST00000321897 AOPEPQ8N6M6 819 aa17.66■□□□□ 0.42
VARS2-201ENST00000321897 FEZ1Q99689 392 aa17.66■□□□□ 0.42
VARS2-201ENST00000321897 METTL22Q9BUU2 404 aaPredicted RBP17.66■□□□□ 0.42
VARS2-201ENST00000321897 FTOQ9C0B1 505 aaKnown RBP eCLIP17.66■□□□□ 0.42
VARS2-201ENST00000321897 SETQ01105 290 aaPredicted RBP17.66■□□□□ 0.42
VARS2-201ENST00000321897 SPECC1Q5M775 1068 aa17.66■□□□□ 0.42
VARS2-201ENST00000321897 SYT10Q6XYQ8 523 aa17.66■□□□□ 0.42
VARS2-201ENST00000321897 HOOK1Q9UJC3 728 aaKnown RBP17.66■□□□□ 0.42
VARS2-201ENST00000321897 SLC52A2Q9HAB3 445 aa17.66■□□□□ 0.42
VARS2-201ENST00000321897 SLC12A7Q9Y666 1083 aa17.66■□□□□ 0.42
VARS2-201ENST00000321897 SLC3A2P08195 630 aaKnown RBP17.65■□□□□ 0.42
VARS2-201ENST00000321897 DDX19AQ9NUU7 478 aaKnown RBP17.65■□□□□ 0.42
VARS2-201ENST00000321897 TAF5LO75529 589 aa17.65■□□□□ 0.42
VARS2-201ENST00000321897 NCBP3Q53F19 620 aaKnown RBP17.65■□□□□ 0.42
VARS2-201ENST00000321897 PI16Q6UXB8 463 aa17.65■□□□□ 0.42
VARS2-201ENST00000321897 DNAJC10Q8IXB1 793 aa17.65■□□□□ 0.42
VARS2-201ENST00000321897 PUS3Q9BZE2 481 aaKnown RBP17.65■□□□□ 0.42
VARS2-201ENST00000321897 CEP152O94986 1710 aa17.65■□□□□ 0.42
VARS2-201ENST00000321897 EXOC5O00471 708 aa17.65■□□□□ 0.42
VARS2-201ENST00000321897 METAP2P50579 478 aaKnown RBP eCLIP17.65■□□□□ 0.42
VARS2-201ENST00000321897 JMYQ8N9B5 988 aa17.65■□□□□ 0.42
VARS2-201ENST00000321897 IPO4Q8TEX9 1081 aaKnown RBP17.65■□□□□ 0.42
VARS2-201ENST00000321897 NRBP1Q9UHY1 535 aa17.65■□□□□ 0.42
VARS2-201ENST00000321897 LRRC7Q96NW7 1537 aa17.64■□□□□ 0.42
VARS2-201ENST00000321897 SLU7O95391 586 aaKnown RBP17.64■□□□□ 0.41
VARS2-201ENST00000321897 RPS6KB1P23443 525 aa17.64■□□□□ 0.41
VARS2-201ENST00000321897 ZNF397Q8NF99 534 aaPredicted RBP17.64■□□□□ 0.41
VARS2-201ENST00000321897 hCG_1642624A0A1W2PR95 340 aa17.64■□□□□ 0.41
VARS2-201ENST00000321897 MCM6Q14566 821 aa17.64■□□□□ 0.41
VARS2-201ENST00000321897 DCAF5Q96JK2 942 aa17.64■□□□□ 0.41
VARS2-201ENST00000321897 AATKQ6ZMQ8 1374 aa17.64■□□□□ 0.41
VARS2-201ENST00000321897 IARSP41252 1262 aaKnown RBP17.64■□□□□ 0.41
VARS2-201ENST00000321897 XBP1P17861 261 aa17.63■□□□□ 0.41
VARS2-201ENST00000321897 EPHA10Q5JZY3 1008 aa17.63■□□□□ 0.41
VARS2-201ENST00000321897 ANO10Q9NW15 660 aa17.63■□□□□ 0.41
VARS2-201ENST00000321897 HMG20BQ9P0W2 317 aa17.63■□□□□ 0.41
VARS2-201ENST00000321897 ARHGEF10O15013 1369 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms