RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 MAP2P11137 1827 aaKnown RBP10.95□□□□□ -0.66
TMEM39A-201ENST00000319172 IFIT3O14879 490 aaKnown RBP10.95□□□□□ -0.66
TMEM39A-201ENST00000319172 ME1P48163 572 aa10.95□□□□□ -0.66
TMEM39A-201ENST00000319172 EPHA10Q5JZY3 1008 aa10.95□□□□□ -0.66
TMEM39A-201ENST00000319172 ATG3Q9NT62 314 aa10.95□□□□□ -0.66
TMEM39A-201ENST00000319172 CTDP1Q9Y5B0 961 aaPredicted RBP10.95□□□□□ -0.66
TMEM39A-201ENST00000319172 AK2P54819 239 aa10.95□□□□□ -0.66
TMEM39A-201ENST00000319172 ZBTB38Q8NAP3 1195 aaPredicted RBP10.95□□□□□ -0.66
TMEM39A-201ENST00000319172 NCAPD2Q15021 1401 aa10.94□□□□□ -0.66
TMEM39A-201ENST00000319172 POLR3DP05423 398 aaPredicted RBP10.94□□□□□ -0.66
TMEM39A-201ENST00000319172 TPM4P67936 248 aa10.94□□□□□ -0.66
TMEM39A-201ENST00000319172 SASS6Q6UVJ0 657 aa10.94□□□□□ -0.66
TMEM39A-201ENST00000319172 QTRT2Q9H974 415 aaKnown RBP10.94□□□□□ -0.66
TMEM39A-201ENST00000319172 MYOM1P52179 1685 aa10.94□□□□□ -0.66
TMEM39A-201ENST00000319172 MICU3Q86XE3 530 aa10.94□□□□□ -0.66
TMEM39A-201ENST00000319172 CNBD1Q8NA66 436 aa10.94□□□□□ -0.66
TMEM39A-201ENST00000319172 GREM2Q9H772 168 aa10.94□□□□□ -0.66
TMEM39A-201ENST00000319172 PCCAP05165 728 aaPredicted RBP10.94□□□□□ -0.66
TMEM39A-201ENST00000319172 CTSWP56202 376 aa10.94□□□□□ -0.66
TMEM39A-201ENST00000319172 MAGEB6Q8N7X4 407 aa10.94□□□□□ -0.66
TMEM39A-201ENST00000319172 SPATA32Q96LK8 384 aa10.94□□□□□ -0.66
TMEM39A-201ENST00000319172 NRKQ7Z2Y5 1582 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 PDIA4P13667 645 aaKnown RBP10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 NASPP49321 788 aaPredicted RBP10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 MKNK2Q9HBH9 465 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 COPRSQ9NQ92 184 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 TFIP11Q9UBB9 837 aaKnown RBP10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 AOX1Q06278 1338 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 BAG4O95429 457 aaKnown RBP10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 ZNF396Q96N95 335 aaPredicted RBP10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 BRMS1Q9HCU9 246 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 SLC4A4Q9Y6R1 1079 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 SOS2Q07890 1332 aaPredicted RBP10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 STX6O43752 255 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 IL6STP40189 918 aaPredicted RBP10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 ZAP70P43403 619 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 Q6ZUG5 572 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 DBNLQ9UJU6 430 aaKnown RBP10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 ITSN1Q15811 1721 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 NBPF26B4DH59 902 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 F8W031 263 aaPredicted RBP10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 KCNQ2O43526 872 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 HMGB2P26583 209 aaKnown RBP10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 MRE11P49959 708 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 PUM3Q15397 648 aaKnown RBP10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 HLFQ16534 295 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 NBPF14Q5TI25 921 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 NBPF10Q6P3W6 841 aaKnown RBP10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 NBPF15Q8N660 670 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 KBTBD3Q8NAB2 608 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 NCOA7Q8NI08 942 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 MST1RQ04912 1400 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 UBR1Q8IWV7 1749 aa10.93□□□□□ -0.66
TMEM39A-201ENST00000319172 KINO60870 393 aaKnown RBP10.92□□□□□ -0.66
TMEM39A-201ENST00000319172 USPL1Q5W0Q7 1092 aa10.92□□□□□ -0.66
TMEM39A-201ENST00000319172 NAA16Q6N069 864 aaPredicted RBP10.92□□□□□ -0.66
TMEM39A-201ENST00000319172 SYNE4Q8N205 404 aa10.92□□□□□ -0.66
TMEM39A-201ENST00000319172 SEC62Q99442 399 aaKnown RBP10.92□□□□□ -0.66
TMEM39A-201ENST00000319172 KIF13AQ9H1H9 1805 aa10.92□□□□□ -0.66
TMEM39A-201ENST00000319172 CDKL5O76039 1030 aa10.92□□□□□ -0.66
TMEM39A-201ENST00000319172 TMEM67Q5HYA8 995 aa10.92□□□□□ -0.66
TMEM39A-201ENST00000319172 PALD1Q9ULE6 856 aa10.92□□□□□ -0.66
TMEM39A-201ENST00000319172 USP32Q8NFA0 1604 aa10.92□□□□□ -0.66
TMEM39A-201ENST00000319172 ATP5JP18859 108 aa10.92□□□□□ -0.66
TMEM39A-201ENST00000319172 MFSD6Q6ZSS7 791 aa10.92□□□□□ -0.66
TMEM39A-201ENST00000319172 BRPF3Q9ULD4 1205 aa10.92□□□□□ -0.66
TMEM39A-201ENST00000319172 SLC12A7Q9Y666 1083 aa10.92□□□□□ -0.66
TMEM39A-201ENST00000319172 C3P01024 1663 aa10.92□□□□□ -0.66
TMEM39A-201ENST00000319172 ADCY9O60503 1353 aa10.91□□□□□ -0.66
TMEM39A-201ENST00000319172 A0A0D9SFI3 127 aa10.91□□□□□ -0.66
TMEM39A-201ENST00000319172 KLF18A0A0U1RQI7 1052 aa10.91□□□□□ -0.66
TMEM39A-201ENST00000319172 SASH1O94885 1247 aa10.91□□□□□ -0.66
TMEM39A-201ENST00000319172 TRPC5Q9UL62 973 aaPredicted RBP10.91□□□□□ -0.66
TMEM39A-201ENST00000319172 SNX14Q9Y5W7 946 aa10.91□□□□□ -0.66
TMEM39A-201ENST00000319172 PTPN12Q05209 780 aaKnown RBP10.91□□□□□ -0.66
TMEM39A-201ENST00000319172 C8orf76Q96K31 380 aa10.91□□□□□ -0.66
TMEM39A-201ENST00000319172 RAD50Q92878 1312 aa10.91□□□□□ -0.66
TMEM39A-201ENST00000319172 PES1O00541 588 aaKnown RBP10.91□□□□□ -0.66
TMEM39A-201ENST00000319172 MCM5P33992 734 aa10.91□□□□□ -0.66
TMEM39A-201ENST00000319172 POLA2Q14181 598 aa10.91□□□□□ -0.66
TMEM39A-201ENST00000319172 NLRP10Q86W26 655 aa10.91□□□□□ -0.66
TMEM39A-201ENST00000319172 GOLGA8AA7E2F4 631 aa10.91□□□□□ -0.66
TMEM39A-201ENST00000319172 PTH1RQ03431 593 aa10.91□□□□□ -0.66
TMEM39A-201ENST00000319172 IQCA1Q86XH1 822 aa10.91□□□□□ -0.66
TMEM39A-201ENST00000319172 STAP2Q9UGK3 403 aa10.91□□□□□ -0.66
TMEM39A-201ENST00000319172 SYCE3A1L190 88 aa10.9□□□□□ -0.66
TMEM39A-201ENST00000319172 RIMBP2O15034 1052 aa10.9□□□□□ -0.66
TMEM39A-201ENST00000319172 TRIM37O94972 964 aa10.9□□□□□ -0.66
TMEM39A-201ENST00000319172 MBD4O95243 580 aa10.9□□□□□ -0.66
TMEM39A-201ENST00000319172 APBA3O96018 575 aa10.9□□□□□ -0.66
TMEM39A-201ENST00000319172 ADORA1P30542 326 aa10.9□□□□□ -0.66
TMEM39A-201ENST00000319172 RNF41Q9H4P4 317 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-201ENST00000319172 SLC27A2O14975 620 aa10.9□□□□□ -0.66
TMEM39A-201ENST00000319172 MPNDQ8N594 471 aa10.9□□□□□ -0.66
TMEM39A-201ENST00000319172 LPIN2Q92539 896 aa10.9□□□□□ -0.66
TMEM39A-201ENST00000319172 TPD52L1Q16890 204 aaPredicted RBP10.9□□□□□ -0.67
TMEM39A-201ENST00000319172 OSBPL3Q9H4L5 887 aa10.9□□□□□ -0.67
TMEM39A-201ENST00000319172 SEC31BQ9NQW1 1179 aa10.9□□□□□ -0.67
TMEM39A-201ENST00000319172 ORC3Q9UBD5 711 aaPredicted RBP10.9□□□□□ -0.67
TMEM39A-201ENST00000319172 IFT172Q9UG01 1749 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms