RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 JAG2Q9Y219 1238 aa8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 RBM8AQ9Y5S9 174 aaKnown RBP8.47□□□□□ -1.05
LYSMD3-201ENST00000315948 TTLL5Q6EMB2 1281 aa8.46□□□□□ -1.05
LYSMD3-201ENST00000315948 NKX2-3Q8TAU0 364 aa8.46□□□□□ -1.05
LYSMD3-201ENST00000315948 UTP14AQ9BVJ6 771 aaKnown RBP8.46□□□□□ -1.05
LYSMD3-201ENST00000315948 GZF1Q9H116 711 aaPredicted RBP8.46□□□□□ -1.05
LYSMD3-201ENST00000315948 SH3TC1Q8TE82 1336 aa8.46□□□□□ -1.05
LYSMD3-201ENST00000315948 ERVV-1B6SEH8 477 aa8.46□□□□□ -1.05
LYSMD3-201ENST00000315948 CASTP20810 708 aaKnown RBP8.46□□□□□ -1.05
LYSMD3-201ENST00000315948 MCAMP43121 646 aa8.46□□□□□ -1.05
LYSMD3-201ENST00000315948 TPRNQ4KMQ1 711 aa8.46□□□□□ -1.05
LYSMD3-201ENST00000315948 GORABQ5T7V8 394 aa8.46□□□□□ -1.05
LYSMD3-201ENST00000315948 TMX3Q96JJ7 454 aa8.46□□□□□ -1.05
LYSMD3-201ENST00000315948 IFIT1P09914 478 aaKnown RBP8.46□□□□□ -1.06
LYSMD3-201ENST00000315948 VGLL2Q8N8G2 317 aa8.46□□□□□ -1.06
LYSMD3-201ENST00000315948 HAUS7Q99871 368 aa8.46□□□□□ -1.06
LYSMD3-201ENST00000315948 PAG1Q9NWQ8 432 aa8.46□□□□□ -1.06
LYSMD3-201ENST00000315948 DENND2AQ9ULE3 1009 aa8.46□□□□□ -1.06
LYSMD3-201ENST00000315948 ANKRD18BA2A2Z9 1011 aa8.46□□□□□ -1.06
LYSMD3-201ENST00000315948 PDE8AO60658 829 aa8.46□□□□□ -1.06
LYSMD3-201ENST00000315948 CELF1Q92879 486 aaKnown RBP8.46□□□□□ -1.06
LYSMD3-201ENST00000315948 TNPO1Q92973 898 aaKnown RBP8.46□□□□□ -1.06
LYSMD3-201ENST00000315948 JAKMIP1Q96N16 626 aaKnown RBP8.46□□□□□ -1.06
LYSMD3-201ENST00000315948 CCDC171Q6TFL3 1326 aa8.45□□□□□ -1.06
LYSMD3-201ENST00000315948 M0R2C6 588 aa8.45□□□□□ -1.06
LYSMD3-201ENST00000315948 KCNJ4P48050 445 aa8.45□□□□□ -1.06
LYSMD3-201ENST00000315948 CHST3Q7LGC8 479 aa8.45□□□□□ -1.06
LYSMD3-201ENST00000315948 PROM2Q8N271 834 aa8.45□□□□□ -1.06
LYSMD3-201ENST00000315948 BCAMP50895 628 aa8.45□□□□□ -1.06
LYSMD3-201ENST00000315948 ATP2B3Q16720 1220 aa8.45□□□□□ -1.06
LYSMD3-201ENST00000315948 KIAA1211Q6ZU35 1233 aa8.45□□□□□ -1.06
LYSMD3-201ENST00000315948 OSBP2Q969R2 916 aa8.45□□□□□ -1.06
LYSMD3-201ENST00000315948 TRPC5Q9UL62 973 aaPredicted RBP8.45□□□□□ -1.06
LYSMD3-201ENST00000315948 NECAB1Q8N987 351 aa8.45□□□□□ -1.06
LYSMD3-201ENST00000315948 GPR101Q96P66 508 aaPredicted RBP8.45□□□□□ -1.06
LYSMD3-201ENST00000315948 PLA2G12BQ9BX93 195 aa8.45□□□□□ -1.06
LYSMD3-201ENST00000315948 AK2P54819 239 aa8.44□□□□□ -1.06
LYSMD3-201ENST00000315948 RUFY3Q7L099 469 aa8.44□□□□□ -1.06
LYSMD3-201ENST00000315948 SMARCC1Q92922 1105 aaPredicted RBP8.44□□□□□ -1.06
LYSMD3-201ENST00000315948 BTAF1O14981 1849 aa8.44□□□□□ -1.06
LYSMD3-201ENST00000315948 SMIM22K7EJ46 135 aa8.44□□□□□ -1.06
LYSMD3-201ENST00000315948 GTF2E1P29083 439 aaPredicted RBP8.44□□□□□ -1.06
LYSMD3-201ENST00000315948 DEKP35659 375 aaKnown RBP8.44□□□□□ -1.06
LYSMD3-201ENST00000315948 HAND2P61296 217 aa8.44□□□□□ -1.06
LYSMD3-201ENST00000315948 NECTIN1Q15223 517 aa8.44□□□□□ -1.06
LYSMD3-201ENST00000315948 TTC39AQ5SRH9 613 aa8.44□□□□□ -1.06
LYSMD3-201ENST00000315948 CREB3L3Q68CJ9 461 aa8.44□□□□□ -1.06
LYSMD3-201ENST00000315948 PUS7LQ9H0K6 701 aaKnown RBP8.44□□□□□ -1.06
LYSMD3-201ENST00000315948 ZDHHC9Q9Y397 364 aa8.44□□□□□ -1.06
LYSMD3-201ENST00000315948 CDHR2Q9BYE9 1310 aa8.44□□□□□ -1.06
LYSMD3-201ENST00000315948 SLC27A2O14975 620 aa8.44□□□□□ -1.06
LYSMD3-201ENST00000315948 FOXP2O15409 715 aa8.44□□□□□ -1.06
LYSMD3-201ENST00000315948 PIH1D3Q9NQM4 214 aaKnown RBP8.44□□□□□ -1.06
LYSMD3-201ENST00000315948 PCNTO95613 3336 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 PDE8BO95263 885 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 CYP2E1P05181 493 aaPredicted RBP8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 STK11IPQ8N1F8 1099 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 INCENPQ9NQS7 918 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 CIAO1O76071 339 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 GYG1P46976 350 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 CCDC102BQ68D86 513 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 STOX1Q6ZVD7 989 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 KBTBD3Q8NAB2 608 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 MAP4K1Q92918 833 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 GPHNQ9NQX3 736 aaPredicted RBP8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 MED23Q9ULK4 1368 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 ST18O60284 1047 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 ST3GAL1Q11201 340 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 STK3Q13188 491 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 MPHOSPH8Q99549 860 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 CHMP5Q9NZZ3 219 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 MAST3O60307 1309 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 IDH1O75874 414 aaKnown RBP8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 WWC3Q9ULE0 1092 aa8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 RTCBQ9Y3I0 505 aaKnown RBP8.43□□□□□ -1.06
LYSMD3-201ENST00000315948 THSD7AQ9UPZ6 1657 aa8.42□□□□□ -1.06
LYSMD3-201ENST00000315948 ATRNO75882 1429 aa8.42□□□□□ -1.06
LYSMD3-201ENST00000315948 CYP21A2P08686 494 aa8.42□□□□□ -1.06
LYSMD3-201ENST00000315948 CHRNDQ07001 517 aa8.42□□□□□ -1.06
LYSMD3-201ENST00000315948 RASGRF1Q13972 1273 aa8.42□□□□□ -1.06
LYSMD3-201ENST00000315948 WASHC4Q2M389 1173 aa8.42□□□□□ -1.06
LYSMD3-201ENST00000315948 KRT27Q7Z3Y8 459 aa8.42□□□□□ -1.06
LYSMD3-201ENST00000315948 NBPF5PQ86XG9 351 aaPredicted RBP8.42□□□□□ -1.06
LYSMD3-201ENST00000315948 TTC14Q96N46 770 aa8.42□□□□□ -1.06
LYSMD3-201ENST00000315948 ONECUT3O60422 494 aaPredicted RBP8.42□□□□□ -1.06
LYSMD3-201ENST00000315948 ZPR1O75312 459 aa8.42□□□□□ -1.06
LYSMD3-201ENST00000315948 TXNRD3Q86VQ6 643 aa8.42□□□□□ -1.06
LYSMD3-201ENST00000315948 RAB11FIP4Q86YS3 637 aa8.42□□□□□ -1.06
LYSMD3-201ENST00000315948 RPS6KA4O75676 772 aa8.42□□□□□ -1.06
LYSMD3-201ENST00000315948 NFIXQ14938 502 aa8.42□□□□□ -1.06
LYSMD3-201ENST00000315948 OLFM4Q6UX06 510 aa8.42□□□□□ -1.06
LYSMD3-201ENST00000315948 NPHP1O15259 732 aa8.41□□□□□ -1.06
LYSMD3-201ENST00000315948 TFCP2L1Q9NZI6 479 aa8.41□□□□□ -1.06
LYSMD3-201ENST00000315948 TAOK2Q9UL54 1235 aa8.41□□□□□ -1.06
LYSMD3-201ENST00000315948 MCCP23508 829 aa8.41□□□□□ -1.06
LYSMD3-201ENST00000315948 RFC4P35249 363 aa8.41□□□□□ -1.06
LYSMD3-201ENST00000315948 CCDC158Q5M9N0 1113 aa8.41□□□□□ -1.06
LYSMD3-201ENST00000315948 SETDB2Q96T68 719 aa8.41□□□□□ -1.06
LYSMD3-201ENST00000315948 NARFQ9UHQ1 456 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms