RNA–Protein interactions for RNA: ENST00000312123.13

GAPVD1-203, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GAPVD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-203ENST00000312123 ZNF287Q9HBT7 754 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 TCP11L1Q9NUJ3 509 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 JAG2Q9Y219 1238 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 SLC4A4Q9Y6R1 1079 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 CCDC171Q6TFL3 1326 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 CAVIN2O95810 425 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 KCNG4Q8TDN1 519 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 EDC3Q96F86 508 aaKnown RBP8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 NGLY1Q96IV0 654 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 CDC5LQ99459 802 aaKnown RBP8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 PLCD4Q9BRC7 762 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 RIMS2Q9UQ26 1411 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 TEX14Q8IWB6 1497 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 ANKRD62A6NC57 917 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 GADD45BO75293 160 aaPredicted RBP8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 PKP1Q13835 747 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 RTN1Q16799 776 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 FAM89AQ96GI7 184 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 CCDC113Q9H0I3 377 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 UHRF1BP1LA0JNW5 1464 aa8.13□□□□□ -1.11
GAPVD1-203ENST00000312123 HOXC9P31274 260 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 PAFAH1B1P43034 410 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 IQCEQ6IPM2 695 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 RUFY3Q7L099 469 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 DHX32Q7L7V1 743 aaKnown RBP8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 CADPS2Q86UW7 1296 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 DHX58Q96C10 678 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 TRIM47Q96LD4 638 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 DRC1Q96MC2 740 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 PUS7Q96PZ0 661 aaKnown RBP8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 ZKSCAN3Q9BRR0 538 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 TTC41PQ6P2S7 1318 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 MACROD2A1Z1Q3 448 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 ZFYP08048 801 aaPredicted RBP8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 MCM6Q14566 821 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 GBP3Q9H0R5 595 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 KAT14Q9H8E8 782 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 IFNKQ9P0W0 207 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 HLTFQ14527 1009 aaKnown RBP eCLIP8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 RRAGBQ5VZM2 374 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 DDX21Q9NR30 783 aaKnown RBP eCLIP8.12□□□□□ -1.113e-6■□□□□ 8.6
GAPVD1-203ENST00000312123 CFAP65Q6ZU64 1925 aaKnown RBP8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 AKR1B10O60218 316 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 CCDC40Q4G0X9 1142 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 TXLNBQ8N3L3 684 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 TEX13AQ9BXU3 409 aaPredicted RBP8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 JADE2Q9NQC1 790 aa8.12□□□□□ -1.11
GAPVD1-203ENST00000312123 UHRF1BP1Q6BDS2 1440 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 USP19O94966 1318 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 SGSM2O43147 1006 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 TRIM21P19474 475 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 USP8P40818 1118 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 PDE4BQ07343 736 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 ZNF594Q96JF6 807 aaPredicted RBP8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 RAB34Q9BZG1 259 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 BCCIPQ9P287 314 aaKnown RBP eCLIP8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 SNX14Q9Y5W7 946 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 TMCO5BA8MYB1 307 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 USO1O60763 962 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 UQCRFS1P1P0C7P4 283 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 GSPT1P15170 499 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 KIF5BP33176 963 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 NOP2P46087 812 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 LMAN1P49257 510 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 TMEM266Q2M3C6 531 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 CCDC178Q5BJE1 867 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 TMOD2Q9NZR1 351 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 TMEM63CQ9P1W3 806 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 MAP3K5Q99683 1374 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 F8W031 263 aaPredicted RBP8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 RNMTO43148 476 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 PRPF4BQ13523 1007 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 KARSQ15046 597 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 SEPT7Q16181 437 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 SPECC1Q5M775 1068 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 IFIT1BQ5T764 474 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 CCDC150Q8NCX0 1101 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 ESR2Q92731 530 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 RPGRQ92834 1020 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 RTL1A6NKG5 1358 aa8.11□□□□□ -1.11
GAPVD1-203ENST00000312123 PLIN2Q99541 437 aa8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 TSG101Q99816 390 aa8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 NIP7Q9Y221 180 aaKnown RBP eCLIP8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 PAXBP1Q9Y5B6 917 aa8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 RNF113AO15541 343 aaKnown RBP8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 PPP1R12BO60237 982 aaPredicted RBP8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 NBPF6Q5VWK0 638 aa8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 NBPF5PQ86XG9 351 aaPredicted RBP8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 PAF1Q8N7H5 531 aa8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 SMARCC1Q92922 1105 aaPredicted RBP8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 NBPF4Q96M43 638 aa8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 ORAI2Q96SN7 254 aa8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 FAM107BQ9H098 131 aa8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 LMBRD1Q9NUN5 540 aa8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 PALD1Q9ULE6 856 aa8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 YTHDC2Q9H6S0 1430 aaKnown RBP8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 TRIM75PA6NK02 468 aa8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 JAK2O60674 1132 aa8.1□□□□□ -1.11
GAPVD1-203ENST00000312123 BMS1Q14692 1282 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms