RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 RPL13P26373 211 aaKnown RBP3.65□□□□□ -1.82
CLOCK-201ENST00000309964 KIF22Q14807 665 aa3.65□□□□□ -1.82
CLOCK-201ENST00000309964 ARHGAP29Q52LW3 1261 aa3.65□□□□□ -1.82
CLOCK-201ENST00000309964 CWC27Q6UX04 472 aaKnown RBP3.65□□□□□ -1.82
CLOCK-201ENST00000309964 KCNG4Q8TDN1 519 aa3.65□□□□□ -1.82
CLOCK-201ENST00000309964 C8orf37Q96NL8 207 aa3.65□□□□□ -1.82
CLOCK-201ENST00000309964 CROCC2H7BZ55 1655 aa3.65□□□□□ -1.82
CLOCK-201ENST00000309964 IBTKQ9P2D0 1353 aaPredicted RBP3.65□□□□□ -1.83
CLOCK-201ENST00000309964 ARHGEF37A1IGU5 675 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 CTNNA2P26232 953 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 KSR2Q6VAB6 950 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 LEKR1Q6ZMV7 388 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 TSNARE1Q96NA8 513 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 TCOF1Q13428 1488 aaKnown RBP3.65□□□□□ -1.83
CLOCK-201ENST00000309964 SBNO1A3KN83 1393 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 ERVV-2B6SEH9 535 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 SYCP3Q8IZU3 236 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 NUP62CLQ9H1M0 184 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 TRPC5Q9UL62 973 aaPredicted RBP3.65□□□□□ -1.83
CLOCK-201ENST00000309964 TBCAO75347 108 aaKnown RBP3.65□□□□□ -1.83
CLOCK-201ENST00000309964 NR1I2O75469 434 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 BMP2KLQ5H9B9 411 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 NAA16Q6N069 864 aaPredicted RBP3.65□□□□□ -1.83
CLOCK-201ENST00000309964 UBE3BQ7Z3V4 1068 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 FAM43AQ8N2R8 423 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 IP6K1Q92551 441 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 TSPY26PQ9H489 355 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 LIMCH1Q9UPQ0 1083 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 PTPRKQ15262 1439 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 SMTNP53814 917 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 SLFN5Q08AF3 891 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 ATP2B3Q16720 1220 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 ZNF713Q8N859 430 aaPredicted RBP3.65□□□□□ -1.83
CLOCK-201ENST00000309964 CNBD1Q8NA66 436 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 DDX19AQ9NUU7 478 aaKnown RBP3.65□□□□□ -1.83
CLOCK-201ENST00000309964 NIP7Q9Y221 180 aaKnown RBP eCLIP3.65□□□□□ -1.83
CLOCK-201ENST00000309964 CLEC11AQ9Y240 323 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 EFCAB6Q5THR3 1501 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 CLASP1Q7Z460 1538 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 NUP153P49790 1475 aaKnown RBP3.65□□□□□ -1.83
CLOCK-201ENST00000309964 NBPF1Q3BBV0 1214 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 KIAA1328Q86T90 577 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 DZIP3Q86Y13 1208 aaKnown RBP3.65□□□□□ -1.83
CLOCK-201ENST00000309964 NFATC2IPQ8NCF5 419 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 SLC17A8Q8NDX2 589 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 IQCDQ96DY2 449 aa3.65□□□□□ -1.83
CLOCK-201ENST00000309964 ADGRL2O95490 1459 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 BICDL2A1A5D9 508 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 H0YHG0 523 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 HAUS3Q68CZ6 603 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 FAM196AQ6ZSG2 479 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 CNKSR1Q969H4 720 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 ALS2CR12Q96Q35 445 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 KIF5CO60282 957 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 SSBP05455 408 aaKnown RBP eCLIP3.64□□□□□ -1.83
CLOCK-201ENST00000309964 LDHBP07195 334 aaKnown RBP3.64□□□□□ -1.83
CLOCK-201ENST00000309964 WTAPQ15007 396 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 NLGN1Q8N2Q7 840 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 MYD88Q99836 296 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 FAM107BQ9H098 131 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 CLIP2Q9UDT6 1046 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 CDC42BPAQ5VT25 1732 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 POTEB2H3BUK9 544 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 SLAIN2Q9P270 581 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 TNNQ9UQP3 1299 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 MAP3K5Q99683 1374 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 TET3O43151 1660 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 FERP16591 822 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 PDE4CQ08493 712 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 PANK1Q8TE04 598 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 ZNF592Q92610 1267 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 CNNM3Q8NE01 707 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 JAKMIP1Q96N16 626 aaKnown RBP3.64□□□□□ -1.83
CLOCK-201ENST00000309964 MIS12Q9H081 205 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.64□□□□□ -1.83
CLOCK-201ENST00000309964 MTMR7Q9Y216 660 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 V9GYY5 206 aaPredicted RBP3.64□□□□□ -1.83
CLOCK-201ENST00000309964 ZC3H13Q5T200 1668 aaKnown RBP3.64□□□□□ -1.83
CLOCK-201ENST00000309964 SFPQP23246 707 aaKnown RBP eCLIP3.64□□□□□ -1.83
CLOCK-201ENST00000309964 TMEM67Q5HYA8 995 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 LMBR1Q8WVP7 490 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 MAP3K2Q9Y2U5 619 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 POLR3AO14802 1390 aaPredicted RBP3.64□□□□□ -1.83
CLOCK-201ENST00000309964 INSRP06213 1382 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 PARD3Q8TEW0 1356 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 SYNMO15061 1565 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 M0QZ92 97 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 METAP2P50579 478 aaKnown RBP eCLIP3.64□□□□□ -1.83
CLOCK-201ENST00000309964 ENOX2Q16206 610 aaKnown RBP3.64□□□□□ -1.83
CLOCK-201ENST00000309964 ODR4Q5SWX8 454 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 TRIML1Q8N9V2 468 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 RRP36Q96EU6 259 aaKnown RBP3.64□□□□□ -1.83
CLOCK-201ENST00000309964 RABGAP1Q9Y3P9 1069 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 KAT6AQ92794 2004 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 SPHKAPQ2M3C7 1700 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 SBNO2Q9Y2G9 1366 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 LPXNO60711 386 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 YEATS4O95619 227 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 KRT13P13646 458 aa3.64□□□□□ -1.83
CLOCK-201ENST00000309964 MCMDC2Q4G0Z9 681 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms