RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 PDCP20941 246 aa23.51■■□□□ 1.35
LRFN4-201ENST00000309602 FERMT3Q86UX7 667 aa23.51■■□□□ 1.35
LRFN4-201ENST00000309602 Q6ZUG5 572 aa23.5■■□□□ 1.35
LRFN4-201ENST00000309602 HELLSQ9NRZ9 838 aa23.5■■□□□ 1.35
LRFN4-201ENST00000309602 PDIA4P13667 645 aaKnown RBP23.5■■□□□ 1.35
LRFN4-201ENST00000309602 STOX1Q6ZVD7 989 aa23.5■■□□□ 1.35
LRFN4-201ENST00000309602 PIGBQ92521 554 aa23.5■■□□□ 1.35
LRFN4-201ENST00000309602 IFIT1P09914 478 aaKnown RBP23.49■■□□□ 1.35
LRFN4-201ENST00000309602 ZMYM1Q5SVZ6 1142 aa23.49■■□□□ 1.35
LRFN4-201ENST00000309602 FAM173BQ6P4H8 233 aa23.49■■□□□ 1.35
LRFN4-201ENST00000309602 GTF3C6Q969F1 213 aa23.49■■□□□ 1.35
LRFN4-201ENST00000309602 LETM1O95202 739 aaPredicted RBP23.48■■□□□ 1.35
LRFN4-201ENST00000309602 CEP126Q9P2H0 1117 aa23.48■■□□□ 1.35
LRFN4-201ENST00000309602 JAK2O60674 1132 aa23.47■■□□□ 1.35
LRFN4-201ENST00000309602 TRIM28Q13263 835 aaKnown RBP23.47■■□□□ 1.35
LRFN4-201ENST00000309602 CCDC57Q2TAC2 916 aa23.47■■□□□ 1.35
LRFN4-201ENST00000309602 DSCC1Q9BVC3 393 aa23.47■■□□□ 1.35
LRFN4-201ENST00000309602 LRRC2Q9BYS8 371 aa23.47■■□□□ 1.35
LRFN4-201ENST00000309602 MSNP26038 577 aaKnown RBP23.47■■□□□ 1.35
LRFN4-201ENST00000309602 TTC6Q86TZ1 520 aa23.47■■□□□ 1.35
LRFN4-201ENST00000309602 FAM89AQ96GI7 184 aa23.47■■□□□ 1.35
LRFN4-201ENST00000309602 NAP1L5Q96NT1 182 aaPredicted RBP23.47■■□□□ 1.35
LRFN4-201ENST00000309602 CCDC85AQ96PX6 553 aaPredicted RBP23.47■■□□□ 1.35
LRFN4-201ENST00000309602 NHSL1Q5SYE7 1610 aa23.46■■□□□ 1.35
LRFN4-201ENST00000309602 KRT85P78386 507 aa23.46■■□□□ 1.35
LRFN4-201ENST00000309602 KIF6Q6ZMV9 814 aa23.46■■□□□ 1.35
LRFN4-201ENST00000309602 VSIG10Q8N0Z9 540 aa23.46■■□□□ 1.35
LRFN4-201ENST00000309602 MAST3O60307 1309 aa23.46■■□□□ 1.35
LRFN4-201ENST00000309602 PCCAP05165 728 aaPredicted RBP23.45■■□□□ 1.35
LRFN4-201ENST00000309602 TICAM2Q86XR7 235 aa23.45■■□□□ 1.35
LRFN4-201ENST00000309602 TEX13AQ9BXU3 409 aaPredicted RBP23.45■■□□□ 1.35
LRFN4-201ENST00000309602 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.45■■□□□ 1.35
LRFN4-201ENST00000309602 NOL7Q9UMY1 257 aaKnown RBP23.45■■□□□ 1.35
LRFN4-201ENST00000309602 RNF113AO15541 343 aaKnown RBP23.45■■□□□ 1.34
LRFN4-201ENST00000309602 HSP90B1P14625 803 aaKnown RBP23.45■■□□□ 1.34
LRFN4-201ENST00000309602 BRF1Q92994 677 aa23.45■■□□□ 1.34
LRFN4-201ENST00000309602 BTG4Q9NY30 223 aa23.45■■□□□ 1.34
LRFN4-201ENST00000309602 A0A0G2JLW4 131 aa23.44■■□□□ 1.34
LRFN4-201ENST00000309602 HSPD1P10809 573 aaKnown RBP23.44■■□□□ 1.34
LRFN4-201ENST00000309602 ADORA1P30542 326 aa23.44■■□□□ 1.34
LRFN4-201ENST00000309602 FAM184AQ8NB25 1140 aa23.44■■□□□ 1.34
LRFN4-201ENST00000309602 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.44■■□□□ 1.34
LRFN4-201ENST00000309602 GIMAP6Q6P9H5 292 aa23.43■■□□□ 1.34
LRFN4-201ENST00000309602 PLA2G12BQ9BX93 195 aa23.43■■□□□ 1.34
LRFN4-201ENST00000309602 LAMA4Q16363 1823 aa23.43■■□□□ 1.34
LRFN4-201ENST00000309602 STARD3NLO95772 234 aa23.43■■□□□ 1.34
LRFN4-201ENST00000309602 DHX32Q7L7V1 743 aaKnown RBP23.43■■□□□ 1.34
LRFN4-201ENST00000309602 ZBTB38Q8NAP3 1195 aaPredicted RBP23.43■■□□□ 1.34
LRFN4-201ENST00000309602 FUCA2Q9BTY2 467 aa23.43■■□□□ 1.34
LRFN4-201ENST00000309602 SPEF2Q9C093 1822 aa23.43■■□□□ 1.34
LRFN4-201ENST00000309602 M0R2C6 588 aa23.42■■□□□ 1.34
LRFN4-201ENST00000309602 HMGB1P09429 215 aaKnown RBP23.42■■□□□ 1.34
LRFN4-201ENST00000309602 HCLS1P14317 486 aaPredicted RBP23.42■■□□□ 1.34
LRFN4-201ENST00000309602 SYNE4Q8N205 404 aa23.42■■□□□ 1.34
LRFN4-201ENST00000309602 XAGE2Q96GT9 111 aa23.42■■□□□ 1.34
LRFN4-201ENST00000309602 FBXO3Q9UK99 471 aa23.42■■□□□ 1.34
LRFN4-201ENST00000309602 ELP1O95163 1332 aa23.42■■□□□ 1.34
LRFN4-201ENST00000309602 MAP3K15Q6ZN16 1313 aa23.42■■□□□ 1.34
LRFN4-201ENST00000309602 CSF1RP07333 972 aa23.42■■□□□ 1.34
LRFN4-201ENST00000309602 FKBP4Q02790 459 aaKnown RBP eCLIP23.42■■□□□ 1.34
LRFN4-201ENST00000309602 SCRN1Q12765 414 aa23.42■■□□□ 1.34
LRFN4-201ENST00000309602 UVSSAQ2YD98 709 aa23.42■■□□□ 1.34
LRFN4-201ENST00000309602 FGD1P98174 961 aa23.41■■□□□ 1.34
LRFN4-201ENST00000309602 HLFQ16534 295 aa23.41■■□□□ 1.34
LRFN4-201ENST00000309602 AKAP2Q9Y2D5 859 aa23.41■■□□□ 1.34
LRFN4-201ENST00000309602 CCDC158Q5M9N0 1113 aa23.41■■□□□ 1.34
LRFN4-201ENST00000309602 TTC39AQ5SRH9 613 aa23.41■■□□□ 1.34
LRFN4-201ENST00000309602 GIGYF2Q6Y7W6 1299 aaKnown RBP23.41■■□□□ 1.34
LRFN4-201ENST00000309602 OSBP2Q969R2 916 aa23.41■■□□□ 1.34
LRFN4-201ENST00000309602 CCDC39Q9UFE4 941 aa23.41■■□□□ 1.34
LRFN4-201ENST00000309602 ITGB4P16144 1822 aa23.41■■□□□ 1.34
LRFN4-201ENST00000309602 EXOSC10Q01780 885 aaKnown RBP23.4■■□□□ 1.34
LRFN4-201ENST00000309602 TAF7LQ5H9L4 462 aa23.4■■□□□ 1.34
LRFN4-201ENST00000309602 GORABQ5T7V8 394 aa23.4■■□□□ 1.34
LRFN4-201ENST00000309602 TFIP11Q9UBB9 837 aaKnown RBP23.4■■□□□ 1.34
LRFN4-201ENST00000309602 E7EWF7 191 aa23.4■■□□□ 1.34
LRFN4-201ENST00000309602 PFKFB2O60825 505 aa23.4■■□□□ 1.34
LRFN4-201ENST00000309602 IFIT5Q13325 482 aaKnown RBP23.4■■□□□ 1.34
LRFN4-201ENST00000309602 DDX11Q96FC9 970 aa23.4■■□□□ 1.34
LRFN4-201ENST00000309602 SLC4A9Q96Q91 983 aa23.4■■□□□ 1.34
LRFN4-201ENST00000309602 ZKSCAN5Q9Y2L8 839 aa23.4■■□□□ 1.34
LRFN4-201ENST00000309602 GPTP24298 496 aa23.39■■□□□ 1.34
LRFN4-201ENST00000309602 SCARF1Q14162 830 aa23.39■■□□□ 1.34
LRFN4-201ENST00000309602 APOBRQ0VD83 1088 aa23.39■■□□□ 1.33
LRFN4-201ENST00000309602 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.38■■□□□ 1.33
LRFN4-201ENST00000309602 TTLL5Q6EMB2 1281 aa23.38■■□□□ 1.33
LRFN4-201ENST00000309602 SMARCC2Q8TAQ2 1214 aa23.38■■□□□ 1.33
LRFN4-201ENST00000309602 AGXT2Q9BYV1 514 aa23.38■■□□□ 1.33
LRFN4-201ENST00000309602 SCAND2PQ9GZW5 306 aaPredicted RBP23.38■■□□□ 1.33
LRFN4-201ENST00000309602 DISP2A7MBM2 1401 aa23.38■■□□□ 1.33
LRFN4-201ENST00000309602 LIG1P18858 919 aa23.38■■□□□ 1.33
LRFN4-201ENST00000309602 RESTQ13127 1097 aa23.38■■□□□ 1.33
LRFN4-201ENST00000309602 NLRP10Q86W26 655 aa23.38■■□□□ 1.33
LRFN4-201ENST00000309602 SPATA32Q96LK8 384 aa23.38■■□□□ 1.33
LRFN4-201ENST00000309602 USP25Q9UHP3 1055 aa23.38■■□□□ 1.33
LRFN4-201ENST00000309602 RIC1Q4ADV7 1423 aa23.38■■□□□ 1.33
LRFN4-201ENST00000309602 KLHL34Q8N239 644 aa23.37■■□□□ 1.33
LRFN4-201ENST00000309602 LEO1Q8WVC0 666 aaPredicted RBP23.37■■□□□ 1.33
LRFN4-201ENST00000309602 CDHR2Q9BYE9 1310 aa23.37■■□□□ 1.33
LRFN4-201ENST00000309602 BCL9O00512 1426 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms