RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 EAF2Q96CJ1 260 aaPredicted RBP12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 ISCA1Q9BUE6 129 aa12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 TLR7Q9NYK1 1049 aaKnown RBP12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 PALD1Q9ULE6 856 aa12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.3□□□□□ -0.44
APOBEC3F-201ENST00000308521 RFX5P48382 616 aaPredicted RBP12.29□□□□□ -0.44
APOBEC3F-201ENST00000308521 GIGYF2Q6Y7W6 1299 aaKnown RBP12.29□□□□□ -0.44
APOBEC3F-201ENST00000308521 IFIT2P09913 472 aaKnown RBP12.29□□□□□ -0.44
APOBEC3F-201ENST00000308521 MYRIPQ8NFW9 859 aa12.29□□□□□ -0.44
APOBEC3F-201ENST00000308521 CCDC87Q9NVE4 849 aa12.29□□□□□ -0.44
APOBEC3F-201ENST00000308521 HMGN5P82970 282 aaKnown RBP12.28□□□□□ -0.44
APOBEC3F-201ENST00000308521 USP48Q86UV5 1035 aa12.28□□□□□ -0.44
APOBEC3F-201ENST00000308521 PI4K2BQ8TCG2 481 aa12.28□□□□□ -0.44
APOBEC3F-201ENST00000308521 PRIMPOLQ96LW4 560 aa12.28□□□□□ -0.44
APOBEC3F-201ENST00000308521 QTRT2Q9H974 415 aaKnown RBP12.28□□□□□ -0.44
APOBEC3F-201ENST00000308521 GTF2F1P35269 517 aaKnown RBP eCLIP12.28□□□□□ -0.44
APOBEC3F-201ENST00000308521 TFCP2Q12800 502 aa12.28□□□□□ -0.44
APOBEC3F-201ENST00000308521 RABL6Q3YEC7 729 aaPredicted RBP12.28□□□□□ -0.44
APOBEC3F-201ENST00000308521 CCDC183Q5T5S1 534 aa12.28□□□□□ -0.44
APOBEC3F-201ENST00000308521 PIBF1Q8WXW3 757 aa12.28□□□□□ -0.44
APOBEC3F-201ENST00000308521 ANO2Q9NQ90 1003 aa12.28□□□□□ -0.44
APOBEC3F-201ENST00000308521 RPAP1Q9BWH6 1393 aaPredicted RBP12.27□□□□□ -0.44
APOBEC3F-201ENST00000308521 IL6STP40189 918 aaPredicted RBP12.27□□□□□ -0.44
APOBEC3F-201ENST00000308521 SEPT12Q8IYM1 358 aa12.27□□□□□ -0.44
APOBEC3F-201ENST00000308521 GADD45BO75293 160 aaPredicted RBP12.27□□□□□ -0.45
APOBEC3F-201ENST00000308521 HSPA4P34932 840 aa12.27□□□□□ -0.45
APOBEC3F-201ENST00000308521 EIF5P55010 431 aaKnown RBP12.27□□□□□ -0.45
APOBEC3F-201ENST00000308521 NLRP10Q86W26 655 aa12.27□□□□□ -0.45
APOBEC3F-201ENST00000308521 LINC00116Q8NCU8 138 aa12.27□□□□□ -0.45
APOBEC3F-201ENST00000308521 PUS3Q9BZE2 481 aaKnown RBP12.27□□□□□ -0.45
APOBEC3F-201ENST00000308521 PRDM10Q9NQV6 1147 aa12.27□□□□□ -0.45
APOBEC3F-201ENST00000308521 LRRC24Q50LG9 513 aa12.26□□□□□ -0.45
APOBEC3F-201ENST00000308521 ERC1Q8IUD2 1116 aa12.26□□□□□ -0.45
APOBEC3F-201ENST00000308521 TRMT112Q9UI30 125 aaKnown RBP12.26□□□□□ -0.45
APOBEC3F-201ENST00000308521 NDUFB9Q9Y6M9 179 aa12.26□□□□□ -0.45
APOBEC3F-201ENST00000308521 COPRSQ9NQ92 184 aa12.26□□□□□ -0.45
APOBEC3F-201ENST00000308521 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.26□□□□□ -0.45
APOBEC3F-201ENST00000308521 UBN2Q6ZU65 1347 aa12.26□□□□□ -0.45
APOBEC3F-201ENST00000308521 CDK11BP21127 795 aaKnown RBP12.25□□□□□ -0.45
APOBEC3F-201ENST00000308521 IL25Q9H293 177 aa12.25□□□□□ -0.45
APOBEC3F-201ENST00000308521 BOLA2Q9H3K6 86 aa12.25□□□□□ -0.45
APOBEC3F-201ENST00000308521 NUP188Q5SRE5 1749 aa12.25□□□□□ -0.45
APOBEC3F-201ENST00000308521 MYH14Q7Z406 1995 aaKnown RBP12.25□□□□□ -0.45
APOBEC3F-201ENST00000308521 SMARCC1Q92922 1105 aaPredicted RBP12.25□□□□□ -0.45
APOBEC3F-201ENST00000308521 TRPC5Q9UL62 973 aaPredicted RBP12.25□□□□□ -0.45
APOBEC3F-201ENST00000308521 GOLGB1Q14789 3259 aaKnown RBP12.25□□□□□ -0.45
APOBEC3F-201ENST00000308521 ZBTB38Q8NAP3 1195 aaPredicted RBP12.24□□□□□ -0.45
APOBEC3F-201ENST00000308521 SPTLC3Q9NUV7 552 aa12.24□□□□□ -0.45
APOBEC3F-201ENST00000308521 ZSCAN22P10073 491 aaPredicted RBP12.24□□□□□ -0.45
APOBEC3F-201ENST00000308521 TIMM10P62072 90 aa12.24□□□□□ -0.45
APOBEC3F-201ENST00000308521 UBE2HP62256 183 aa12.24□□□□□ -0.45
APOBEC3F-201ENST00000308521 NOLC1Q14978 699 aaKnown RBP eCLIP12.24□□□□□ -0.45
APOBEC3F-201ENST00000308521 TEX2Q8IWB9 1127 aa12.24□□□□□ -0.45
APOBEC3F-201ENST00000308521 EDC3Q96F86 508 aaKnown RBP12.24□□□□□ -0.45
APOBEC3F-201ENST00000308521 ECHDC1Q9NTX5 307 aa12.24□□□□□ -0.45
APOBEC3F-201ENST00000308521 PCCAP05165 728 aaPredicted RBP12.24□□□□□ -0.45
APOBEC3F-201ENST00000308521 CHRM1P11229 460 aaPredicted RBP12.24□□□□□ -0.45
APOBEC3F-201ENST00000308521 HCLS1P14317 486 aaPredicted RBP12.24□□□□□ -0.45
APOBEC3F-201ENST00000308521 TJP1Q07157 1748 aa12.24□□□□□ -0.45
APOBEC3F-201ENST00000308521 TRIM28Q13263 835 aaKnown RBP12.24□□□□□ -0.45
APOBEC3F-201ENST00000308521 BICDL1Q6ZP65 573 aa12.24□□□□□ -0.45
APOBEC3F-201ENST00000308521 NEUROD6Q96NK8 337 aa12.24□□□□□ -0.45
APOBEC3F-201ENST00000308521 IRS4O14654 1257 aaPredicted RBP12.23□□□□□ -0.45
APOBEC3F-201ENST00000308521 ADCY5O95622 1261 aa12.23□□□□□ -0.45
APOBEC3F-201ENST00000308521 CCDC57Q2TAC2 916 aa12.23□□□□□ -0.45
APOBEC3F-201ENST00000308521 SUSD4Q5VX71 490 aa12.23□□□□□ -0.45
APOBEC3F-201ENST00000308521 NOL8Q76FK4 1167 aaKnown RBP12.23□□□□□ -0.45
APOBEC3F-201ENST00000308521 ATG9AQ7Z3C6 839 aa12.23□□□□□ -0.45
APOBEC3F-201ENST00000308521 TTC14Q96N46 770 aa12.23□□□□□ -0.45
APOBEC3F-201ENST00000308521 UPF3BQ9BZI7 483 aaKnown RBP12.23□□□□□ -0.45
APOBEC3F-201ENST00000308521 CAMTA2O94983 1202 aa12.23□□□□□ -0.45
APOBEC3F-201ENST00000308521 AMIGO3Q86WK7 504 aa12.23□□□□□ -0.45
APOBEC3F-201ENST00000308521 DBNDD2Q9BQY9 259 aa12.23□□□□□ -0.45
APOBEC3F-201ENST00000308521 GREM2Q9H772 168 aa12.23□□□□□ -0.45
APOBEC3F-201ENST00000308521 GDPD2Q9HCC8 539 aa12.23□□□□□ -0.45
APOBEC3F-201ENST00000308521 DBNLQ9UJU6 430 aaKnown RBP12.23□□□□□ -0.45
APOBEC3F-201ENST00000308521 ATP6V1DQ9Y5K8 247 aa12.23□□□□□ -0.45
APOBEC3F-201ENST00000308521 RAD50Q92878 1312 aa12.22□□□□□ -0.45
APOBEC3F-201ENST00000308521 KDM4AO75164 1064 aa12.22□□□□□ -0.45
APOBEC3F-201ENST00000308521 GLRX3O76003 335 aaKnown RBP12.22□□□□□ -0.45
APOBEC3F-201ENST00000308521 TNNI3KQ59H18 835 aa12.22□□□□□ -0.45
APOBEC3F-201ENST00000308521 CWC27Q6UX04 472 aaKnown RBP12.22□□□□□ -0.45
APOBEC3F-201ENST00000308521 USP25Q9UHP3 1055 aa12.22□□□□□ -0.45
APOBEC3F-201ENST00000308521 NIP7Q9Y221 180 aaKnown RBP eCLIP12.22□□□□□ -0.45
APOBEC3F-201ENST00000308521 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.22□□□□□ -0.45
APOBEC3F-201ENST00000308521 FPGT-TNNI3KV9GXZ4 949 aa12.22□□□□□ -0.45
APOBEC3F-201ENST00000308521 ERVV-1B6SEH8 477 aa12.22□□□□□ -0.45
APOBEC3F-201ENST00000308521 TPM3P06753 285 aa12.22□□□□□ -0.45
APOBEC3F-201ENST00000308521 HSP90AB3PQ58FF7 597 aa12.22□□□□□ -0.45
APOBEC3F-201ENST00000308521 DNTTIP2Q5QJE6 756 aaKnown RBP12.22□□□□□ -0.45
APOBEC3F-201ENST00000308521 ZNF34Q8IZ26 560 aa12.22□□□□□ -0.45
APOBEC3F-201ENST00000308521 DNAJC2Q99543 621 aaKnown RBP12.22□□□□□ -0.45
APOBEC3F-201ENST00000308521 CCNL1Q9UK58 526 aaPredicted RBP12.22□□□□□ -0.45
APOBEC3F-201ENST00000308521 SGSM2O43147 1006 aa12.21□□□□□ -0.45
APOBEC3F-201ENST00000308521 TTLL11Q8NHH1 800 aa12.21□□□□□ -0.45
APOBEC3F-201ENST00000308521 ZNF830Q96NB3 372 aaPredicted RBP12.21□□□□□ -0.45
APOBEC3F-201ENST00000308521 FUCA2Q9BTY2 467 aa12.21□□□□□ -0.45
APOBEC3F-201ENST00000308521 TTC41PQ6P2S7 1318 aa12.21□□□□□ -0.45
APOBEC3F-201ENST00000308521 TCHHQ07283 1943 aa12.21□□□□□ -0.46
APOBEC3F-201ENST00000308521 STX6O43752 255 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms