RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 STAP2Q9UGK3 403 aa13.08□□□□□ -0.32
CASP3-201ENST00000308394 SEC24BO95487 1268 aa13.07□□□□□ -0.32
CASP3-201ENST00000308394 IL15P40933 162 aaPredicted RBP13.07□□□□□ -0.32
CASP3-201ENST00000308394 NBR1Q14596 966 aa13.07□□□□□ -0.32
CASP3-201ENST00000308394 RGS22Q8NE09 1264 aa13.07□□□□□ -0.32
CASP3-201ENST00000308394 PUS3Q9BZE2 481 aaKnown RBP13.07□□□□□ -0.32
CASP3-201ENST00000308394 NYXQ9GZU5 481 aa13.07□□□□□ -0.32
CASP3-201ENST00000308394 TRIM6-TRIM34B2RNG4 842 aa13.07□□□□□ -0.32
CASP3-201ENST00000308394 SDSP20132 328 aa13.07□□□□□ -0.32
CASP3-201ENST00000308394 ATG9AQ7Z3C6 839 aa13.07□□□□□ -0.32
CASP3-201ENST00000308394 GPATCH3Q96I76 525 aa13.07□□□□□ -0.32
CASP3-201ENST00000308394 MTMR7Q9Y216 660 aa13.07□□□□□ -0.32
CASP3-201ENST00000308394 TPTE2Q6XPS3 522 aa13.06□□□□□ -0.32
CASP3-201ENST00000308394 LDHAL6AQ6ZMR3 332 aa13.06□□□□□ -0.32
CASP3-201ENST00000308394 SCN7AQ01118 1682 aa13.06□□□□□ -0.32
CASP3-201ENST00000308394 ZNF827Q17R98 1081 aa13.06□□□□□ -0.32
CASP3-201ENST00000308394 CCDC152Q4G0S7 254 aa13.06□□□□□ -0.32
CASP3-201ENST00000308394 RILPL2Q969X0 211 aa13.06□□□□□ -0.32
CASP3-201ENST00000308394 CIAO1O76071 339 aa13.06□□□□□ -0.32
CASP3-201ENST00000308394 EN1Q05925 392 aaPredicted RBP13.06□□□□□ -0.32
CASP3-201ENST00000308394 TNNI3KQ59H18 835 aa13.06□□□□□ -0.32
CASP3-201ENST00000308394 CNNM1Q9NRU3 951 aa13.06□□□□□ -0.32
CASP3-201ENST00000308394 FPGT-TNNI3KV9GXZ4 949 aa13.06□□□□□ -0.32
CASP3-201ENST00000308394 CDC45O75419 566 aa13.05□□□□□ -0.32
CASP3-201ENST00000308394 SF3B2Q13435 895 aaKnown RBP13.05□□□□□ -0.32
CASP3-201ENST00000308394 CCDC24Q8N4L8 307 aa13.05□□□□□ -0.32
CASP3-201ENST00000308394 KCTD17Q8N5Z5 321 aa13.05□□□□□ -0.32
CASP3-201ENST00000308394 NEUROD6Q96NK8 337 aa13.05□□□□□ -0.32
CASP3-201ENST00000308394 ECHDC1Q9NTX5 307 aa13.05□□□□□ -0.32
CASP3-201ENST00000308394 TLR7Q9NYK1 1049 aaKnown RBP13.05□□□□□ -0.32
CASP3-201ENST00000308394 TTC41PQ6P2S7 1318 aa13.05□□□□□ -0.32
CASP3-201ENST00000308394 ERC2O15083 957 aa13.05□□□□□ -0.32
CASP3-201ENST00000308394 MAP4K4O95819 1239 aaPredicted RBP13.05□□□□□ -0.32
CASP3-201ENST00000308394 GYS1P13807 737 aa13.05□□□□□ -0.32
CASP3-201ENST00000308394 NFIXQ14938 502 aa13.05□□□□□ -0.32
CASP3-201ENST00000308394 EZH2Q15910 746 aaKnown RBP13.05□□□□□ -0.32
CASP3-201ENST00000308394 TBC1D9Q6ZT07 1266 aa13.05□□□□□ -0.32
CASP3-201ENST00000308394 PI4K2BQ8TCG2 481 aa13.05□□□□□ -0.32
CASP3-201ENST00000308394 UPF2Q9HAU5 1272 aaKnown RBP13.05□□□□□ -0.32
CASP3-201ENST00000308394 CEP126Q9P2H0 1117 aa13.05□□□□□ -0.32
CASP3-201ENST00000308394 AOX1Q06278 1338 aa13.04□□□□□ -0.32
CASP3-201ENST00000308394 RRP9O43818 475 aaKnown RBP13.04□□□□□ -0.32
CASP3-201ENST00000308394 MFAP1P55081 439 aaKnown RBP13.04□□□□□ -0.32
CASP3-201ENST00000308394 HSP90AA2PQ14568 343 aaPredicted RBP13.04□□□□□ -0.32
CASP3-201ENST00000308394 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
CASP3-201ENST00000308394 ZNF830Q96NB3 372 aaPredicted RBP13.04□□□□□ -0.32
CASP3-201ENST00000308394 SEC31BQ9NQW1 1179 aa13.04□□□□□ -0.32
CASP3-201ENST00000308394 C4AP0C0L4 1744 aa13.04□□□□□ -0.32
CASP3-201ENST00000308394 GLRX3O76003 335 aaKnown RBP13.04□□□□□ -0.32
CASP3-201ENST00000308394 UBR3Q6ZT12 1888 aa13.04□□□□□ -0.32
CASP3-201ENST00000308394 CLGNO14967 610 aa13.03□□□□□ -0.32
CASP3-201ENST00000308394 TIMM10P62072 90 aa13.03□□□□□ -0.32
CASP3-201ENST00000308394 METTL24Q5JXM2 366 aa13.03□□□□□ -0.32
CASP3-201ENST00000308394 CASC1Q6TDU7 716 aa13.03□□□□□ -0.32
CASP3-201ENST00000308394 MPHOSPH8Q99549 860 aa13.03□□□□□ -0.32
CASP3-201ENST00000308394 NLRP3Q96P20 1036 aa13.03□□□□□ -0.32
CASP3-201ENST00000308394 MYH3P11055 1940 aa13.03□□□□□ -0.32
CASP3-201ENST00000308394 CARMIL3Q8ND23 1372 aa13.02□□□□□ -0.32
CASP3-201ENST00000308394 MAFGO15525 162 aa13.02□□□□□ -0.32
CASP3-201ENST00000308394 SLC10A5Q5PT55 438 aa13.02□□□□□ -0.32
CASP3-201ENST00000308394 C3orf67Q6ZVT6 689 aa13.02□□□□□ -0.32
CASP3-201ENST00000308394 COL23A1Q86Y22 540 aaPredicted RBP13.02□□□□□ -0.32
CASP3-201ENST00000308394 DBNDD2Q9BQY9 259 aa13.02□□□□□ -0.32
CASP3-201ENST00000308394 DBNLQ9UJU6 430 aaKnown RBP13.02□□□□□ -0.32
CASP3-201ENST00000308394 RIPOR2Q9Y4F9 1068 aa13.02□□□□□ -0.32
CASP3-201ENST00000308394 TNS1Q9HBL0 1735 aaKnown RBP13.02□□□□□ -0.33
CASP3-201ENST00000308394 IGHMBP2P38935 993 aaKnown RBP13.02□□□□□ -0.33
CASP3-201ENST00000308394 ANP32AP39687 249 aaKnown RBP13.02□□□□□ -0.33
CASP3-201ENST00000308394 ILDR1Q86SU0 546 aaPredicted RBP13.02□□□□□ -0.33
CASP3-201ENST00000308394 CNBD1Q8NA66 436 aa13.02□□□□□ -0.33
CASP3-201ENST00000308394 CAMKK2Q96RR4 588 aa13.02□□□□□ -0.33
CASP3-201ENST00000308394 ABCC12Q96J65 1359 aa13.02□□□□□ -0.33
CASP3-201ENST00000308394 A0A1B0GUL7 405 aa13.01□□□□□ -0.33
CASP3-201ENST00000308394 CNTROBQ8N137 903 aa13.01□□□□□ -0.33
CASP3-201ENST00000308394 BOLA2Q9H3K6 86 aa13.01□□□□□ -0.33
CASP3-201ENST00000308394 GPR108Q9NPR9 543 aa13.01□□□□□ -0.33
CASP3-201ENST00000308394 AKAP2Q9Y2D5 859 aa13.01□□□□□ -0.33
CASP3-201ENST00000308394 SF3B3Q15393 1217 aaKnown RBP13.01□□□□□ -0.33
CASP3-201ENST00000308394 FLAD1Q8NFF5 587 aa13.01□□□□□ -0.33
CASP3-201ENST00000308394 DDX60Q8IY21 1712 aaKnown RBP13.01□□□□□ -0.33
CASP3-201ENST00000308394 BAG6P46379 1132 aa13□□□□□ -0.33
CASP3-201ENST00000308394 CDC5LQ99459 802 aaKnown RBP13□□□□□ -0.33
CASP3-201ENST00000308394 SERPINB2P05120 415 aa13□□□□□ -0.33
CASP3-201ENST00000308394 TM4SF1P30408 202 aa12.99□□□□□ -0.33
CASP3-201ENST00000308394 GORABQ5T7V8 394 aa12.99□□□□□ -0.33
CASP3-201ENST00000308394 DEFB132Q7Z7B7 95 aa12.99□□□□□ -0.33
CASP3-201ENST00000308394 HELBQ8NG08 1087 aaPredicted RBP12.99□□□□□ -0.33
CASP3-201ENST00000308394 RTL9Q8NET4 1388 aa12.99□□□□□ -0.33
CASP3-201ENST00000308394 ANKRD18AQ8IVF6 992 aa12.99□□□□□ -0.33
CASP3-201ENST00000308394 MROH5Q6ZUA9 1318 aa12.98□□□□□ -0.33
CASP3-201ENST00000308394 PDE8BO95263 885 aa12.98□□□□□ -0.33
CASP3-201ENST00000308394 PRR5LQ6MZQ0 368 aa12.98□□□□□ -0.33
CASP3-201ENST00000308394 NLGN1Q8N2Q7 840 aa12.98□□□□□ -0.33
CASP3-201ENST00000308394 PNPLA7Q6ZV29 1317 aa12.98□□□□□ -0.33
CASP3-201ENST00000308394 ATP5JP18859 108 aa12.98□□□□□ -0.33
CASP3-201ENST00000308394 ST5P78524 1137 aa12.98□□□□□ -0.33
CASP3-201ENST00000308394 SLC15A2Q16348 729 aa12.98□□□□□ -0.33
CASP3-201ENST00000308394 ATP2B3Q16720 1220 aa12.98□□□□□ -0.33
CASP3-201ENST00000308394 ZNF622Q969S3 477 aaKnown RBP eCLIP12.98□□□□□ -0.33
CASP3-201ENST00000308394 STK32BQ9NY57 414 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms