RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 BTG4Q9NY30 223 aa19.06■□□□□ 0.64
CCDC8-201ENST00000307522 MTMR6Q9Y217 621 aa19.06■□□□□ 0.64
CCDC8-201ENST00000307522 RGPD5Q99666 1765 aa19.05■□□□□ 0.64
CCDC8-201ENST00000307522 CWC27Q6UX04 472 aaKnown RBP19.05■□□□□ 0.64
CCDC8-201ENST00000307522 TMEM87AQ8NBN3 555 aa19.05■□□□□ 0.64
CCDC8-201ENST00000307522 CDC37L1Q7L3B6 337 aa19.05■□□□□ 0.64
CCDC8-201ENST00000307522 BICC1Q9H694 974 aaKnown RBP19.05■□□□□ 0.64
CCDC8-201ENST00000307522 ARHGAP29Q52LW3 1261 aa19.04■□□□□ 0.64
CCDC8-201ENST00000307522 EPHA10Q5JZY3 1008 aa19.04■□□□□ 0.64
CCDC8-201ENST00000307522 UBE3BQ7Z3V4 1068 aa19.04■□□□□ 0.64
CCDC8-201ENST00000307522 SMARCE1Q969G3 411 aa19.04■□□□□ 0.64
CCDC8-201ENST00000307522 EDC3Q96F86 508 aaKnown RBP19.04■□□□□ 0.64
CCDC8-201ENST00000307522 NR1I2O75469 434 aa19.04■□□□□ 0.64
CCDC8-201ENST00000307522 CHGBP05060 677 aa19.04■□□□□ 0.64
CCDC8-201ENST00000307522 SKIDA1Q1XH10 827 aa19.04■□□□□ 0.64
CCDC8-201ENST00000307522 RHPN1Q8TCX5 695 aa19.04■□□□□ 0.64
CCDC8-201ENST00000307522 BICD2Q8TD16 824 aa19.04■□□□□ 0.64
CCDC8-201ENST00000307522 SNX14Q9Y5W7 946 aa19.04■□□□□ 0.64
CCDC8-201ENST00000307522 PLA2G4AP47712 749 aa19.03■□□□□ 0.64
CCDC8-201ENST00000307522 STK3Q13188 491 aa19.03■□□□□ 0.64
CCDC8-201ENST00000307522 TTLL7Q6ZT98 887 aa19.03■□□□□ 0.64
CCDC8-201ENST00000307522 LRRC8AQ8IWT6 810 aa19.03■□□□□ 0.64
CCDC8-201ENST00000307522 FAM177A1Q8N128 213 aaPredicted RBP19.03■□□□□ 0.64
CCDC8-201ENST00000307522 FHOD1Q9Y613 1164 aa19.03■□□□□ 0.64
CCDC8-201ENST00000307522 LOC102724159A0A0B4J2E5 919 aa19.03■□□□□ 0.64
CCDC8-201ENST00000307522 CCDC69A6NI79 296 aa19.03■□□□□ 0.64
CCDC8-201ENST00000307522 PDIA6Q15084 440 aa19.03■□□□□ 0.64
CCDC8-201ENST00000307522 PWP2Q15269 919 aaKnown RBP19.03■□□□□ 0.64
CCDC8-201ENST00000307522 PTPN21Q16825 1174 aa19.03■□□□□ 0.64
CCDC8-201ENST00000307522 RGS22Q8NE09 1264 aa19.03■□□□□ 0.64
CCDC8-201ENST00000307522 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.03■□□□□ 0.64
CCDC8-201ENST00000307522 SLU7O95391 586 aaKnown RBP19.02■□□□□ 0.64
CCDC8-201ENST00000307522 ADCK5Q3MIX3 580 aa19.02■□□□□ 0.64
CCDC8-201ENST00000307522 DDX11Q96FC9 970 aa19.02■□□□□ 0.64
CCDC8-201ENST00000307522 IGKV5-2P06315 115 aa19.02■□□□□ 0.64
CCDC8-201ENST00000307522 PNMA6AP0CW24 399 aaPredicted RBP19.02■□□□□ 0.64
CCDC8-201ENST00000307522 MED1Q15648 1581 aaPredicted RBP19.02■□□□□ 0.64
CCDC8-201ENST00000307522 KSR2Q6VAB6 950 aa19.02■□□□□ 0.64
CCDC8-201ENST00000307522 CCDC191Q8NCU4 936 aa19.02■□□□□ 0.64
CCDC8-201ENST00000307522 ZCRB1Q8TBF4 217 aaKnown RBP19.02■□□□□ 0.64
CCDC8-201ENST00000307522 TLR7Q9NYK1 1049 aaKnown RBP19.02■□□□□ 0.64
CCDC8-201ENST00000307522 PLA2G4DQ86XP0 818 aa19.01■□□□□ 0.63
CCDC8-201ENST00000307522 IFIT2P09913 472 aaKnown RBP19.01■□□□□ 0.63
CCDC8-201ENST00000307522 SYCP1Q15431 976 aa19.01■□□□□ 0.63
CCDC8-201ENST00000307522 C11orf57Q6ZUT1 292 aaPredicted RBP19.01■□□□□ 0.63
CCDC8-201ENST00000307522 LIMCH1Q9UPQ0 1083 aa19.01■□□□□ 0.63
CCDC8-201ENST00000307522 KIF24Q5T7B8 1368 aa19.01■□□□□ 0.63
CCDC8-201ENST00000307522 KDM6AO15550 1401 aaPredicted RBP19.01■□□□□ 0.63
CCDC8-201ENST00000307522 STRCP1A6NGW2 1772 aa19■□□□□ 0.63
CCDC8-201ENST00000307522 LARP1BQ659C4 914 aaKnown RBP19■□□□□ 0.63
CCDC8-201ENST00000307522 ERO1AQ96HE7 468 aa19■□□□□ 0.63
CCDC8-201ENST00000307522 AACSQ86V21 672 aa19■□□□□ 0.63
CCDC8-201ENST00000307522 KIF1BPQ96EK5 621 aa19■□□□□ 0.63
CCDC8-201ENST00000307522 JAKMIP1Q96N16 626 aaKnown RBP19■□□□□ 0.63
CCDC8-201ENST00000307522 GOLGA6L19H0YKK7 550 aa18.99■□□□□ 0.63
CCDC8-201ENST00000307522 BMS1Q14692 1282 aaKnown RBP18.99■□□□□ 0.63
CCDC8-201ENST00000307522 ASAP1Q9ULH1 1129 aa18.99■□□□□ 0.63
CCDC8-201ENST00000307522 ANKRD13DQ6ZTN6 518 aa18.99■□□□□ 0.63
CCDC8-201ENST00000307522 ATP6V1DQ9Y5K8 247 aa18.99■□□□□ 0.63
CCDC8-201ENST00000307522 KCNQ4P56696 695 aa18.98■□□□□ 0.63
CCDC8-201ENST00000307522 ACSBG1Q96GR2 724 aa18.98■□□□□ 0.63
CCDC8-201ENST00000307522 KAZALD1Q96I82 304 aa18.98■□□□□ 0.63
CCDC8-201ENST00000307522 DDX21Q9NR30 783 aaKnown RBP eCLIP18.98■□□□□ 0.63
CCDC8-201ENST00000307522 FMNL2Q96PY5 1086 aa18.98■□□□□ 0.63
CCDC8-201ENST00000307522 BOLA2Q9H3K6 86 aa18.98■□□□□ 0.63
CCDC8-201ENST00000307522 GRM8O00222 908 aa18.98■□□□□ 0.63
CCDC8-201ENST00000307522 HSPA4P34932 840 aa18.98■□□□□ 0.63
CCDC8-201ENST00000307522 PRPF40BQ6NWY9 871 aaKnown RBP18.98■□□□□ 0.63
CCDC8-201ENST00000307522 SYNE4Q8N205 404 aa18.98■□□□□ 0.63
CCDC8-201ENST00000307522 GPATCH11Q8N954 259 aa18.98■□□□□ 0.63
CCDC8-201ENST00000307522 SLFNL1Q499Z3 407 aa18.97■□□□□ 0.63
CCDC8-201ENST00000307522 SPATA32Q96LK8 384 aa18.97■□□□□ 0.63
CCDC8-201ENST00000307522 RASSF4Q9H2L5 321 aa18.97■□□□□ 0.63
CCDC8-201ENST00000307522 SMIM5Q71RC9 77 aa18.97■□□□□ 0.63
CCDC8-201ENST00000307522 TAOK2Q9UL54 1235 aa18.97■□□□□ 0.63
CCDC8-201ENST00000307522 TNS3Q68CZ2 1445 aa18.97■□□□□ 0.63
CCDC8-201ENST00000307522 A0A087WZG4 1122 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 MYO1CO00159 1063 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 PRR29P0C7W0 189 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 SLC20A2Q08357 652 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 ST3GAL1Q11201 340 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 EP400NLQ6ZTU2 488 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 HOMER1Q86YM7 354 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 SSH3Q8TE77 659 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 DCAF5Q96JK2 942 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 ZNF142P52746 1687 aaPredicted RBP18.96■□□□□ 0.63
CCDC8-201ENST00000307522 GPTP24298 496 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 KRT85P78386 507 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 ME3Q16798 604 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 CCAR2Q8N163 923 aaKnown RBP18.96■□□□□ 0.63
CCDC8-201ENST00000307522 NBPF26B4DH59 902 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 SNRPA1P09661 255 aaKnown RBP18.96■□□□□ 0.63
CCDC8-201ENST00000307522 ANAPC15P60006 121 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 NEXNQ0ZGT2 675 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 NBPF14Q5TI25 921 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 NBPF10Q6P3W6 841 aaKnown RBP18.96■□□□□ 0.63
CCDC8-201ENST00000307522 NYAP1Q6ZVC0 841 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 NBPF15Q8N660 670 aa18.96■□□□□ 0.63
CCDC8-201ENST00000307522 ZNF594Q96JF6 807 aaPredicted RBP18.96■□□□□ 0.63
CCDC8-201ENST00000307522 FTOQ9C0B1 505 aaKnown RBP eCLIP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms