RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 ZBTB3Q9H5J0 574 aa17.91■□□□□ 0.46
CSDC2-201ENST00000306149 MTERF4Q7Z6M4 381 aaKnown RBP17.91■□□□□ 0.46
CSDC2-201ENST00000306149 LEO1Q8WVC0 666 aaPredicted RBP17.91■□□□□ 0.46
CSDC2-201ENST00000306149 AFDNP55196 1824 aaKnown RBP17.9■□□□□ 0.46
CSDC2-201ENST00000306149 LUZP1Q86V48 1076 aa17.9■□□□□ 0.46
CSDC2-201ENST00000306149 ALDH8A1Q9H2A2 487 aaPredicted RBP17.9■□□□□ 0.46
CSDC2-201ENST00000306149 KRT32Q14532 448 aa17.9■□□□□ 0.46
CSDC2-201ENST00000306149 MAP3K11Q16584 847 aa17.9■□□□□ 0.46
CSDC2-201ENST00000306149 ATG9AQ7Z3C6 839 aa17.9■□□□□ 0.46
CSDC2-201ENST00000306149 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.89■□□□□ 0.45
CSDC2-201ENST00000306149 NOLC1Q14978 699 aaKnown RBP eCLIP17.89■□□□□ 0.45
CSDC2-201ENST00000306149 LRRC24Q50LG9 513 aa17.89■□□□□ 0.45
CSDC2-201ENST00000306149 U3KPZ7 1027 aaPredicted RBP17.89■□□□□ 0.45
CSDC2-201ENST00000306149 TYRO3Q06418 890 aa17.89■□□□□ 0.45
CSDC2-201ENST00000306149 SCRN1Q12765 414 aa17.89■□□□□ 0.45
CSDC2-201ENST00000306149 CHST3Q7LGC8 479 aa17.89■□□□□ 0.45
CSDC2-201ENST00000306149 KBTBD3Q8NAB2 608 aa17.89■□□□□ 0.45
CSDC2-201ENST00000306149 PGBD1Q96JS3 809 aa17.89■□□□□ 0.45
CSDC2-201ENST00000306149 TNMDQ9H2S6 317 aa17.89■□□□□ 0.45
CSDC2-201ENST00000306149 NAP1L2Q9ULW6 460 aaPredicted RBP17.89■□□□□ 0.45
CSDC2-201ENST00000306149 MRVI1Q9Y6F6 885 aa17.89■□□□□ 0.45
CSDC2-201ENST00000306149 TMEM94Q12767 1356 aa17.89■□□□□ 0.45
CSDC2-201ENST00000306149 H3BQV1 296 aa17.88■□□□□ 0.45
CSDC2-201ENST00000306149 IFFO2Q5TF58 517 aa17.88■□□□□ 0.45
CSDC2-201ENST00000306149 SCAND2PQ9GZW5 306 aaPredicted RBP17.88■□□□□ 0.45
CSDC2-201ENST00000306149 ALS2Q96Q42 1657 aa17.88■□□□□ 0.45
CSDC2-201ENST00000306149 ELP1O95163 1332 aa17.88■□□□□ 0.45
CSDC2-201ENST00000306149 NR1I2O75469 434 aa17.88■□□□□ 0.45
CSDC2-201ENST00000306149 SPTLC3Q9NUV7 552 aa17.88■□□□□ 0.45
CSDC2-201ENST00000306149 H7C1W4 665 aa17.87■□□□□ 0.45
CSDC2-201ENST00000306149 CCT2P78371 535 aaKnown RBP17.87■□□□□ 0.45
CSDC2-201ENST00000306149 APOBRQ0VD83 1088 aa17.87■□□□□ 0.45
CSDC2-201ENST00000306149 MYRIPQ8NFW9 859 aa17.87■□□□□ 0.45
CSDC2-201ENST00000306149 BICD2Q8TD16 824 aa17.87■□□□□ 0.45
CSDC2-201ENST00000306149 PRIMPOLQ96LW4 560 aa17.87■□□□□ 0.45
CSDC2-201ENST00000306149 ARID3AQ99856 593 aa17.87■□□□□ 0.45
CSDC2-201ENST00000306149 PUS3Q9BZE2 481 aaKnown RBP17.87■□□□□ 0.45
CSDC2-201ENST00000306149 PAG1Q9NWQ8 432 aa17.87■□□□□ 0.45
CSDC2-201ENST00000306149 ZNF330Q9Y3S2 320 aaPredicted RBP17.87■□□□□ 0.45
CSDC2-201ENST00000306149 CCDC85AQ96PX6 553 aaPredicted RBP17.87■□□□□ 0.45
CSDC2-201ENST00000306149 MST1RQ04912 1400 aa17.87■□□□□ 0.45
CSDC2-201ENST00000306149 ANO6Q4KMQ2 910 aa17.86■□□□□ 0.45
CSDC2-201ENST00000306149 TSC1Q92574 1164 aa17.86■□□□□ 0.45
CSDC2-201ENST00000306149 FTOQ9C0B1 505 aaKnown RBP eCLIP17.86■□□□□ 0.45
CSDC2-201ENST00000306149 MYH15Q9Y2K3 1946 aa17.86■□□□□ 0.45
CSDC2-201ENST00000306149 KCNF1Q9H3M0 494 aa17.86■□□□□ 0.45
CSDC2-201ENST00000306149 NCOA5Q9HCD5 579 aaKnown RBP17.86■□□□□ 0.45
CSDC2-201ENST00000306149 CWC25Q9NXE8 425 aaPredicted RBP17.86■□□□□ 0.45
CSDC2-201ENST00000306149 ARFGEF2Q9Y6D5 1785 aa17.85■□□□□ 0.45
CSDC2-201ENST00000306149 RESTQ13127 1097 aa17.85■□□□□ 0.45
CSDC2-201ENST00000306149 FAM200AQ8TCP9 573 aa17.85■□□□□ 0.45
CSDC2-201ENST00000306149 PYCARDQ9ULZ3 195 aa17.85■□□□□ 0.45
CSDC2-201ENST00000306149 HMGN5P82970 282 aaKnown RBP17.85■□□□□ 0.45
CSDC2-201ENST00000306149 TTLL5Q6EMB2 1281 aa17.85■□□□□ 0.45
CSDC2-201ENST00000306149 KIF1AQ12756 1690 aa17.84■□□□□ 0.45
CSDC2-201ENST00000306149 COL18A1P39060 1754 aa17.84■□□□□ 0.45
CSDC2-201ENST00000306149 TPM3P06753 285 aa17.84■□□□□ 0.45
CSDC2-201ENST00000306149 GUCY1B3Q02153 619 aa17.84■□□□□ 0.45
CSDC2-201ENST00000306149 CBX8Q9HC52 389 aa17.84■□□□□ 0.45
CSDC2-201ENST00000306149 CTDNEP1O95476 244 aa17.84■□□□□ 0.45
CSDC2-201ENST00000306149 TOM1L2Q6ZVM7 507 aa17.84■□□□□ 0.45
CSDC2-201ENST00000306149 A0A1B0GUL7 405 aa17.83■□□□□ 0.45
CSDC2-201ENST00000306149 GTF2F1P35269 517 aaKnown RBP eCLIP17.83■□□□□ 0.45
CSDC2-201ENST00000306149 DHX32Q7L7V1 743 aaKnown RBP17.83■□□□□ 0.45
CSDC2-201ENST00000306149 ADAMTSL3P82987 1691 aa17.83■□□□□ 0.44
CSDC2-201ENST00000306149 IFIT1P09914 478 aaKnown RBP17.83■□□□□ 0.44
CSDC2-201ENST00000306149 HSPD1P10809 573 aaKnown RBP17.83■□□□□ 0.44
CSDC2-201ENST00000306149 FKBP4Q02790 459 aaKnown RBP eCLIP17.83■□□□□ 0.44
CSDC2-201ENST00000306149 FAM177BA6PVY3 158 aa17.82■□□□□ 0.44
CSDC2-201ENST00000306149 NSUN7Q8NE18 718 aaKnown RBP17.82■□□□□ 0.44
CSDC2-201ENST00000306149 DNAJC25Q9H1X3 360 aa17.82■□□□□ 0.44
CSDC2-201ENST00000306149 CLSTN2Q9H4D0 955 aa17.82■□□□□ 0.44
CSDC2-201ENST00000306149 GPHNQ9NQX3 736 aaPredicted RBP17.82■□□□□ 0.44
CSDC2-201ENST00000306149 SH3TC1Q8TE82 1336 aa17.82■□□□□ 0.44
CSDC2-201ENST00000306149 EYA2O00167 538 aa17.82■□□□□ 0.44
CSDC2-201ENST00000306149 ZCRB1Q8TBF4 217 aaKnown RBP17.82■□□□□ 0.44
CSDC2-201ENST00000306149 LAMA4Q16363 1823 aa17.82■□□□□ 0.44
CSDC2-201ENST00000306149 PTPDC1A2A3K4 754 aa17.81■□□□□ 0.44
CSDC2-201ENST00000306149 E7EWF7 191 aa17.81■□□□□ 0.44
CSDC2-201ENST00000306149 PTGS1P23219 599 aa17.81■□□□□ 0.44
CSDC2-201ENST00000306149 IL15P40933 162 aaPredicted RBP17.81■□□□□ 0.44
CSDC2-201ENST00000306149 HSP90AB3PQ58FF7 597 aa17.81■□□□□ 0.44
CSDC2-201ENST00000306149 ZMYM1Q5SVZ6 1142 aa17.81■□□□□ 0.44
CSDC2-201ENST00000306149 DDX19AQ9NUU7 478 aaKnown RBP17.81■□□□□ 0.44
CSDC2-201ENST00000306149 A0A087WWV3 80 aa17.81■□□□□ 0.44
CSDC2-201ENST00000306149 MAST3O60307 1309 aa17.81■□□□□ 0.44
CSDC2-201ENST00000306149 PFKFB2O60825 505 aa17.81■□□□□ 0.44
CSDC2-201ENST00000306149 RFX7Q2KHR2 1363 aa17.81■□□□□ 0.44
CSDC2-201ENST00000306149 PRDM11Q9NQV5 511 aa17.81■□□□□ 0.44
CSDC2-201ENST00000306149 SPATA31A3Q5VYP0 1347 aa17.8■□□□□ 0.44
CSDC2-201ENST00000306149 M0R2C6 588 aa17.8■□□□□ 0.44
CSDC2-201ENST00000306149 HAND2P61296 217 aa17.8■□□□□ 0.44
CSDC2-201ENST00000306149 SMARCC2Q8TAQ2 1214 aa17.8■□□□□ 0.44
CSDC2-201ENST00000306149 HELLSQ9NRZ9 838 aa17.8■□□□□ 0.44
CSDC2-201ENST00000306149 NRBP1Q9UHY1 535 aa17.8■□□□□ 0.44
CSDC2-201ENST00000306149 ADORA1P30542 326 aa17.8■□□□□ 0.44
CSDC2-201ENST00000306149 TNS3Q68CZ2 1445 aa17.8■□□□□ 0.44
CSDC2-201ENST00000306149 GOLGA6L6A8MZA4 724 aa17.79■□□□□ 0.44
CSDC2-201ENST00000306149 ADD1P35611 737 aaKnown RBP17.79■□□□□ 0.44
CSDC2-201ENST00000306149 EXOSC10Q01780 885 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms