RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 LRRC37AA6NMS7 1700 aa23.28■■□□□ 1.32
TMEM88-201ENST00000301599 ADAMTSL1Q8N6G6 1762 aa23.27■■□□□ 1.32
TMEM88-201ENST00000301599 UFL1O94874 794 aa23.27■■□□□ 1.32
TMEM88-201ENST00000301599 DPF2Q92785 391 aa23.27■■□□□ 1.32
TMEM88-201ENST00000301599 DUOX1Q9NRD9 1551 aa23.27■■□□□ 1.32
TMEM88-201ENST00000301599 LTBP1Q14766 1721 aa23.26■■□□□ 1.31
TMEM88-201ENST00000301599 PSMD14O00487 310 aa23.26■■□□□ 1.31
TMEM88-201ENST00000301599 ECE2O60344 883 aa23.26■■□□□ 1.31
TMEM88-201ENST00000301599 BSDC1Q9NW68 430 aaPredicted RBP23.26■■□□□ 1.31
TMEM88-201ENST00000301599 IFFO2Q5TF58 517 aa23.25■■□□□ 1.31
TMEM88-201ENST00000301599 ZC3H15Q8WU90 426 aaKnown RBP23.25■■□□□ 1.31
TMEM88-201ENST00000301599 GPR101Q96P66 508 aaPredicted RBP23.25■■□□□ 1.31
TMEM88-201ENST00000301599 PLA2G12BQ9BX93 195 aa23.25■■□□□ 1.31
TMEM88-201ENST00000301599 GREM2Q9H772 168 aa23.25■■□□□ 1.31
TMEM88-201ENST00000301599 PGAP2Q9UHJ9 254 aa23.25■■□□□ 1.31
TMEM88-201ENST00000301599 XDHP47989 1333 aa23.25■■□□□ 1.31
TMEM88-201ENST00000301599 CNTNAP1P78357 1384 aa23.25■■□□□ 1.31
TMEM88-201ENST00000301599 ATP2B4P23634 1241 aa23.24■■□□□ 1.31
TMEM88-201ENST00000301599 KCNQ5Q9NR82 932 aa23.24■■□□□ 1.31
TMEM88-201ENST00000301599 ZBTB12Q9Y330 459 aaPredicted RBP23.24■■□□□ 1.31
TMEM88-201ENST00000301599 COL4A1P02462 1669 aa23.24■■□□□ 1.31
TMEM88-201ENST00000301599 RPS12P25398 132 aaKnown RBP23.23■■□□□ 1.31
TMEM88-201ENST00000301599 DEFB115Q30KQ5 88 aa23.23■■□□□ 1.31
TMEM88-201ENST00000301599 RTL9Q8NET4 1388 aa23.23■■□□□ 1.31
TMEM88-201ENST00000301599 HIRAP54198 1017 aaPredicted RBP23.22■■□□□ 1.31
TMEM88-201ENST00000301599 CASP7P55210 303 aa23.22■■□□□ 1.31
TMEM88-201ENST00000301599 MICALL2Q8IY33 904 aa23.22■■□□□ 1.31
TMEM88-201ENST00000301599 MINPP1Q9UNW1 487 aa23.22■■□□□ 1.31
TMEM88-201ENST00000301599 RASSF10A6NK89 507 aa23.21■■□□□ 1.31
TMEM88-201ENST00000301599 CSF1RP07333 972 aa23.21■■□□□ 1.31
TMEM88-201ENST00000301599 VIL1P09327 827 aaKnown RBP23.21■■□□□ 1.31
TMEM88-201ENST00000301599 HSPA1AP0DMV8 641 aaKnown RBP23.21■■□□□ 1.31
TMEM88-201ENST00000301599 HSPA1BP0DMV9 641 aaKnown RBP23.21■■□□□ 1.31
TMEM88-201ENST00000301599 IGHMBP2P38935 993 aaKnown RBP23.21■■□□□ 1.31
TMEM88-201ENST00000301599 VEGFBP49765 207 aa23.21■■□□□ 1.31
TMEM88-201ENST00000301599 ABT1Q9ULW3 272 aaKnown RBP23.21■■□□□ 1.31
TMEM88-201ENST00000301599 CACNA1FO60840 1977 aa23.21■■□□□ 1.31
TMEM88-201ENST00000301599 ZNF521Q96K83 1311 aa23.2■■□□□ 1.3
TMEM88-201ENST00000301599 F6X3S4 739 aa23.2■■□□□ 1.3
TMEM88-201ENST00000301599 TRAF5O00463 557 aa23.2■■□□□ 1.3
TMEM88-201ENST00000301599 FMR1Q06787 632 aaKnown RBP eCLIP23.2■■□□□ 1.3
TMEM88-201ENST00000301599 BEND3Q5T5X7 828 aa23.2■■□□□ 1.3
TMEM88-201ENST00000301599 SHTN1A0MZ66 631 aa23.19■■□□□ 1.3
TMEM88-201ENST00000301599 ITGA6P23229 1130 aa23.19■■□□□ 1.3
TMEM88-201ENST00000301599 CDC37L1Q7L3B6 337 aa23.19■■□□□ 1.3
TMEM88-201ENST00000301599 TRPM4Q8TD43 1214 aa23.19■■□□□ 1.3
TMEM88-201ENST00000301599 CST9Q5W186 159 aa23.18■■□□□ 1.3
TMEM88-201ENST00000301599 SAMD7Q7Z3H4 446 aa23.18■■□□□ 1.3
TMEM88-201ENST00000301599 PODNQ7Z5L7 613 aa23.18■■□□□ 1.3
TMEM88-201ENST00000301599 MPHOSPH8Q99549 860 aa23.18■■□□□ 1.3
TMEM88-201ENST00000301599 CCT4P50991 539 aaKnown RBP23.17■■□□□ 1.3
TMEM88-201ENST00000301599 GLIS2Q9BZE0 524 aaPredicted RBP23.17■■□□□ 1.3
TMEM88-201ENST00000301599 ANKRD2Q9GZV1 360 aa23.17■■□□□ 1.3
TMEM88-201ENST00000301599 LEMD3Q9Y2U8 911 aa23.17■■□□□ 1.3
TMEM88-201ENST00000301599 TBC1D10BQ4KMP7 808 aaPredicted RBP23.16■■□□□ 1.3
TMEM88-201ENST00000301599 RBM26Q5T8P6 1007 aaKnown RBP23.16■■□□□ 1.3
TMEM88-201ENST00000301599 ANKRD18BA2A2Z9 1011 aa23.15■■□□□ 1.3
TMEM88-201ENST00000301599 E9PSI1 815 aa23.15■■□□□ 1.3
TMEM88-201ENST00000301599 FAM161AQ3B820 660 aa23.15■■□□□ 1.3
TMEM88-201ENST00000301599 COL13A1Q5TAT6 717 aaPredicted RBP23.15■■□□□ 1.3
TMEM88-201ENST00000301599 RSBN1LQ6PCB5 846 aaPredicted RBP23.15■■□□□ 1.3
TMEM88-201ENST00000301599 AGBL3Q8NEM8 1001 aa23.15■■□□□ 1.3
TMEM88-201ENST00000301599 WTIPA6NIX2 430 aaPredicted RBP23.14■■□□□ 1.29
TMEM88-201ENST00000301599 ALDH1L1O75891 902 aa23.14■■□□□ 1.29
TMEM88-201ENST00000301599 CELF2O95319 508 aaKnown RBP23.14■■□□□ 1.29
TMEM88-201ENST00000301599 FOXO4P98177 505 aa23.14■■□□□ 1.29
TMEM88-201ENST00000301599 C9orf78Q9NZ63 289 aaPredicted RBP23.14■■□□□ 1.29
TMEM88-201ENST00000301599 WDR33Q9C0J8 1336 aaKnown RBP23.13■■□□□ 1.29
TMEM88-201ENST00000301599 PCNTO95613 3336 aa23.13■■□□□ 1.29
TMEM88-201ENST00000301599 USP17L3A6NCW0 530 aa23.13■■□□□ 1.29
TMEM88-201ENST00000301599 USP17L4A6NCW7 530 aa23.13■■□□□ 1.29
TMEM88-201ENST00000301599 IFIT5Q13325 482 aaKnown RBP23.13■■□□□ 1.29
TMEM88-201ENST00000301599 SLC4A10Q6U841 1118 aa23.13■■□□□ 1.29
TMEM88-201ENST00000301599 USP17L1Q7RTZ2 530 aa23.13■■□□□ 1.29
TMEM88-201ENST00000301599 USP48Q86UV5 1035 aa23.13■■□□□ 1.29
TMEM88-201ENST00000301599 SRCIN1Q9C0H9 1055 aa23.13■■□□□ 1.29
TMEM88-201ENST00000301599 TLL2Q9Y6L7 1015 aa23.13■■□□□ 1.29
TMEM88-201ENST00000301599 MED23Q9ULK4 1368 aa23.13■■□□□ 1.29
TMEM88-201ENST00000301599 GRM8O00222 908 aa23.12■■□□□ 1.29
TMEM88-201ENST00000301599 ECE1P42892 770 aa23.12■■□□□ 1.29
TMEM88-201ENST00000301599 DCPSQ96C86 337 aaKnown RBP23.12■■□□□ 1.29
TMEM88-201ENST00000301599 MYH3P11055 1940 aa23.12■■□□□ 1.29
TMEM88-201ENST00000301599 ZNF804BA4D1E1 1349 aa23.11■■□□□ 1.29
TMEM88-201ENST00000301599 SLFN5Q08AF3 891 aa23.11■■□□□ 1.29
TMEM88-201ENST00000301599 PAXIP1Q6ZW49 1069 aaPredicted RBP23.11■■□□□ 1.29
TMEM88-201ENST00000301599 AIDAQ96BJ3 306 aa23.11■■□□□ 1.29
TMEM88-201ENST00000301599 COA1Q9GZY4 146 aa23.11■■□□□ 1.29
TMEM88-201ENST00000301599 CHMP3Q9Y3E7 222 aa23.11■■□□□ 1.29
TMEM88-201ENST00000301599 EGFRP00533 1210 aa23.1■■□□□ 1.29
TMEM88-201ENST00000301599 ZNF280AP59817 542 aaPredicted RBP23.1■■□□□ 1.29
TMEM88-201ENST00000301599 KIF4BQ2VIQ3 1234 aa23.1■■□□□ 1.29
TMEM88-201ENST00000301599 LMBR1LQ6UX01 489 aa23.1■■□□□ 1.29
TMEM88-201ENST00000301599 KRT26Q7Z3Y9 468 aa23.1■■□□□ 1.29
TMEM88-201ENST00000301599 MRPL50Q8N5N7 158 aaKnown RBP23.1■■□□□ 1.29
TMEM88-201ENST00000301599 CCER2I3L3R5 266 aa23.09■■□□□ 1.29
TMEM88-201ENST00000301599 USP17L8P0C7I0 530 aa23.09■■□□□ 1.29
TMEM88-201ENST00000301599 KCNJ4P48050 445 aa23.09■■□□□ 1.29
TMEM88-201ENST00000301599 MAP2K1Q02750 393 aaPredicted RBP23.09■■□□□ 1.29
TMEM88-201ENST00000301599 CHRNDQ07001 517 aa23.09■■□□□ 1.29
TMEM88-201ENST00000301599 SAPCD2Q86UD0 394 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms