RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 CNOT7Q9UIV1 285 aaKnown RBP17.73■□□□□ 0.43
TMEM41B-201ENST00000299596 GGA1Q9UJY5 639 aa17.73■□□□□ 0.43
TMEM41B-201ENST00000299596 ECE2O60344 883 aa17.72■□□□□ 0.43
TMEM41B-201ENST00000299596 UFL1O94874 794 aa17.72■□□□□ 0.43
TMEM41B-201ENST00000299596 HSPA1AP0DMV8 641 aaKnown RBP17.72■□□□□ 0.43
TMEM41B-201ENST00000299596 HSPA1BP0DMV9 641 aaKnown RBP17.72■□□□□ 0.43
TMEM41B-201ENST00000299596 GCKRQ14397 625 aa17.72■□□□□ 0.43
TMEM41B-201ENST00000299596 ZC3H15Q8WU90 426 aaKnown RBP17.72■□□□□ 0.43
TMEM41B-201ENST00000299596 DNAAF4Q8WXU2 420 aa17.72■□□□□ 0.43
TMEM41B-201ENST00000299596 PGAP2Q9UHJ9 254 aa17.72■□□□□ 0.43
TMEM41B-201ENST00000299596 G3V3G9 751 aa17.72■□□□□ 0.43
TMEM41B-201ENST00000299596 PSMD14O00487 310 aa17.72■□□□□ 0.43
TMEM41B-201ENST00000299596 DOK7Q18PE1 504 aa17.72■□□□□ 0.43
TMEM41B-201ENST00000299596 DEFB115Q30KQ5 88 aa17.72■□□□□ 0.43
TMEM41B-201ENST00000299596 DCAF8Q5TAQ9 597 aa17.72■□□□□ 0.43
TMEM41B-201ENST00000299596 UBE3BQ7Z3V4 1068 aa17.72■□□□□ 0.43
TMEM41B-201ENST00000299596 LINS1Q8NG48 757 aa17.72■□□□□ 0.43
TMEM41B-201ENST00000299596 SPINK5Q9NQ38 1064 aaPredicted RBP17.72■□□□□ 0.43
TMEM41B-201ENST00000299596 COL4A1P02462 1669 aa17.71■□□□□ 0.43
TMEM41B-201ENST00000299596 XDHP47989 1333 aa17.71■□□□□ 0.43
TMEM41B-201ENST00000299596 RASSF10A6NK89 507 aa17.71■□□□□ 0.43
TMEM41B-201ENST00000299596 RPS12P25398 132 aaKnown RBP17.71■□□□□ 0.43
TMEM41B-201ENST00000299596 BSDC1Q9NW68 430 aaPredicted RBP17.71■□□□□ 0.43
TMEM41B-201ENST00000299596 ZBTB12Q9Y330 459 aaPredicted RBP17.71■□□□□ 0.43
TMEM41B-201ENST00000299596 RTL9Q8NET4 1388 aa17.71■□□□□ 0.42
TMEM41B-201ENST00000299596 ATP2B4P23634 1241 aa17.7■□□□□ 0.42
TMEM41B-201ENST00000299596 VEGFBP49765 207 aa17.7■□□□□ 0.42
TMEM41B-201ENST00000299596 MICALL2Q8IY33 904 aa17.7■□□□□ 0.42
TMEM41B-201ENST00000299596 GPR101Q96P66 508 aaPredicted RBP17.7■□□□□ 0.42
TMEM41B-201ENST00000299596 PLA2G12BQ9BX93 195 aa17.7■□□□□ 0.42
TMEM41B-201ENST00000299596 GREM2Q9H772 168 aa17.7■□□□□ 0.42
TMEM41B-201ENST00000299596 ABT1Q9ULW3 272 aaKnown RBP17.7■□□□□ 0.42
TMEM41B-201ENST00000299596 HIRAP54198 1017 aaPredicted RBP17.69■□□□□ 0.42
TMEM41B-201ENST00000299596 KCNQ5Q9NR82 932 aa17.69■□□□□ 0.42
TMEM41B-201ENST00000299596 TRAF5O00463 557 aa17.68■□□□□ 0.42
TMEM41B-201ENST00000299596 TRPM4Q8TD43 1214 aa17.68■□□□□ 0.42
TMEM41B-201ENST00000299596 MINPP1Q9UNW1 487 aa17.68■□□□□ 0.42
TMEM41B-201ENST00000299596 VIL1P09327 827 aaKnown RBP17.67■□□□□ 0.42
TMEM41B-201ENST00000299596 IGHMBP2P38935 993 aaKnown RBP17.67■□□□□ 0.42
TMEM41B-201ENST00000299596 CASP7P55210 303 aa17.67■□□□□ 0.42
TMEM41B-201ENST00000299596 FMR1Q06787 632 aaKnown RBP eCLIP17.67■□□□□ 0.42
TMEM41B-201ENST00000299596 COL13A1Q5TAT6 717 aaPredicted RBP17.67■□□□□ 0.42
TMEM41B-201ENST00000299596 CST9Q5W186 159 aa17.67■□□□□ 0.42
TMEM41B-201ENST00000299596 CDC37L1Q7L3B6 337 aa17.67■□□□□ 0.42
TMEM41B-201ENST00000299596 SHTN1A0MZ66 631 aa17.66■□□□□ 0.42
TMEM41B-201ENST00000299596 CSF1RP07333 972 aa17.66■□□□□ 0.42
TMEM41B-201ENST00000299596 SAMD7Q7Z3H4 446 aa17.66■□□□□ 0.42
TMEM41B-201ENST00000299596 PODNQ7Z5L7 613 aa17.66■□□□□ 0.42
TMEM41B-201ENST00000299596 GLIS2Q9BZE0 524 aaPredicted RBP17.66■□□□□ 0.42
TMEM41B-201ENST00000299596 BEND3Q5T5X7 828 aa17.65■□□□□ 0.42
TMEM41B-201ENST00000299596 ZNF521Q96K83 1311 aa17.65■□□□□ 0.42
TMEM41B-201ENST00000299596 F6X3S4 739 aa17.64■□□□□ 0.42
TMEM41B-201ENST00000299596 ITGA6P23229 1130 aa17.64■□□□□ 0.42
TMEM41B-201ENST00000299596 CCT4P50991 539 aaKnown RBP17.64■□□□□ 0.42
TMEM41B-201ENST00000299596 TBC1D10BQ4KMP7 808 aaPredicted RBP17.64■□□□□ 0.42
TMEM41B-201ENST00000299596 AGBL3Q8NEM8 1001 aa17.64■□□□□ 0.42
TMEM41B-201ENST00000299596 MPHOSPH8Q99549 860 aa17.64■□□□□ 0.42
TMEM41B-201ENST00000299596 TLL2Q9Y6L7 1015 aa17.64■□□□□ 0.42
TMEM41B-201ENST00000299596 WDR33Q9C0J8 1336 aaKnown RBP17.64■□□□□ 0.41
TMEM41B-201ENST00000299596 CELF2O95319 508 aaKnown RBP17.64■□□□□ 0.41
TMEM41B-201ENST00000299596 ECE1P42892 770 aa17.64■□□□□ 0.41
TMEM41B-201ENST00000299596 RSBN1LQ6PCB5 846 aaPredicted RBP17.64■□□□□ 0.41
TMEM41B-201ENST00000299596 AIDAQ96BJ3 306 aa17.64■□□□□ 0.41
TMEM41B-201ENST00000299596 ANKRD2Q9GZV1 360 aa17.64■□□□□ 0.41
TMEM41B-201ENST00000299596 LEMD3Q9Y2U8 911 aa17.64■□□□□ 0.41
TMEM41B-201ENST00000299596 MED23Q9ULK4 1368 aa17.63■□□□□ 0.41
TMEM41B-201ENST00000299596 CACNA1FO60840 1977 aa17.63■□□□□ 0.41
TMEM41B-201ENST00000299596 FAM161AQ3B820 660 aa17.63■□□□□ 0.41
TMEM41B-201ENST00000299596 RBM26Q5T8P6 1007 aaKnown RBP17.63■□□□□ 0.41
TMEM41B-201ENST00000299596 ANKRD18BA2A2Z9 1011 aa17.62■□□□□ 0.41
TMEM41B-201ENST00000299596 USP17L3A6NCW0 530 aa17.62■□□□□ 0.41
TMEM41B-201ENST00000299596 USP17L4A6NCW7 530 aa17.62■□□□□ 0.41
TMEM41B-201ENST00000299596 MAP2K1Q02750 393 aaPredicted RBP17.62■□□□□ 0.41
TMEM41B-201ENST00000299596 PAXIP1Q6ZW49 1069 aaPredicted RBP17.62■□□□□ 0.41
TMEM41B-201ENST00000299596 USP17L1Q7RTZ2 530 aa17.62■□□□□ 0.41
TMEM41B-201ENST00000299596 USP48Q86UV5 1035 aa17.62■□□□□ 0.41
TMEM41B-201ENST00000299596 DCPSQ96C86 337 aaKnown RBP17.62■□□□□ 0.41
TMEM41B-201ENST00000299596 CAPNS2Q96L46 248 aa17.62■□□□□ 0.41
TMEM41B-201ENST00000299596 WBP1LQ9NX94 342 aa17.62■□□□□ 0.41
TMEM41B-201ENST00000299596 ZNF609O15014 1411 aa17.61■□□□□ 0.41
TMEM41B-201ENST00000299596 WTIPA6NIX2 430 aaPredicted RBP17.61■□□□□ 0.41
TMEM41B-201ENST00000299596 EGFRP00533 1210 aa17.61■□□□□ 0.41
TMEM41B-201ENST00000299596 IFIT5Q13325 482 aaKnown RBP17.61■□□□□ 0.41
TMEM41B-201ENST00000299596 KIF4BQ2VIQ3 1234 aa17.61■□□□□ 0.41
TMEM41B-201ENST00000299596 SAPCD2Q86UD0 394 aa17.61■□□□□ 0.41
TMEM41B-201ENST00000299596 TNS4Q8IZW8 715 aa17.61■□□□□ 0.41
TMEM41B-201ENST00000299596 HHIPL1Q96JK4 782 aa17.61■□□□□ 0.41
TMEM41B-201ENST00000299596 E9PSI1 815 aa17.6■□□□□ 0.41
TMEM41B-201ENST00000299596 GRM8O00222 908 aa17.6■□□□□ 0.41
TMEM41B-201ENST00000299596 FOXN1O15353 648 aa17.6■□□□□ 0.41
TMEM41B-201ENST00000299596 ALDH1L1O75891 902 aa17.6■□□□□ 0.41
TMEM41B-201ENST00000299596 ZNF280AP59817 542 aaPredicted RBP17.6■□□□□ 0.41
TMEM41B-201ENST00000299596 FOXO4P98177 505 aa17.6■□□□□ 0.41
TMEM41B-201ENST00000299596 KRT26Q7Z3Y9 468 aa17.6■□□□□ 0.41
TMEM41B-201ENST00000299596 GMLQ99445 158 aa17.6■□□□□ 0.41
TMEM41B-201ENST00000299596 COA1Q9GZY4 146 aa17.6■□□□□ 0.41
TMEM41B-201ENST00000299596 ZNF408Q9H9D4 720 aa17.6■□□□□ 0.41
TMEM41B-201ENST00000299596 C9orf78Q9NZ63 289 aaPredicted RBP17.6■□□□□ 0.41
TMEM41B-201ENST00000299596 ZNF804BA4D1E1 1349 aa17.6■□□□□ 0.41
TMEM41B-201ENST00000299596 MYH3P11055 1940 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms