RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 ARFGAP3Q9NP61 516 aa19.19■□□□□ 0.66
CNTNAP3-201ENST00000297668 CYP7A1P22680 504 aa19.18■□□□□ 0.66
CNTNAP3-201ENST00000297668 MARCKSP29966 332 aaPredicted RBP19.18■□□□□ 0.66
CNTNAP3-201ENST00000297668 WDR78Q5VTH9 848 aa19.18■□□□□ 0.66
CNTNAP3-201ENST00000297668 TBCAO75347 108 aaKnown RBP19.18■□□□□ 0.66
CNTNAP3-201ENST00000297668 STAT6P42226 847 aa19.18■□□□□ 0.66
CNTNAP3-201ENST00000297668 PRIM1P49642 420 aaKnown RBP19.18■□□□□ 0.66
CNTNAP3-201ENST00000297668 CHRNA2Q15822 529 aa19.18■□□□□ 0.66
CNTNAP3-201ENST00000297668 IFIT1BQ5T764 474 aaKnown RBP19.18■□□□□ 0.66
CNTNAP3-201ENST00000297668 RNF216Q9NWF9 866 aaPredicted RBP19.18■□□□□ 0.66
CNTNAP3-201ENST00000297668 CTAGE15A4D2H0 777 aa19.18■□□□□ 0.66
CNTNAP3-201ENST00000297668 CTAGE8P0CG41 777 aa19.18■□□□□ 0.66
CNTNAP3-201ENST00000297668 CTAGE6Q86UF2 777 aa19.18■□□□□ 0.66
CNTNAP3-201ENST00000297668 CTAGE4Q8IX94 777 aa19.18■□□□□ 0.66
CNTNAP3-201ENST00000297668 TTC12Q9H892 705 aaPredicted RBP19.18■□□□□ 0.66
CNTNAP3-201ENST00000297668 PARD3Q8TEW0 1356 aa19.18■□□□□ 0.66
CNTNAP3-201ENST00000297668 SMC5Q8IY18 1101 aa19.18■□□□□ 0.66
CNTNAP3-201ENST00000297668 FSD2A1L4K1 749 aa19.17■□□□□ 0.66
CNTNAP3-201ENST00000297668 SLC4A4Q9Y6R1 1079 aa19.17■□□□□ 0.66
CNTNAP3-201ENST00000297668 GRIN2AQ12879 1464 aa19.17■□□□□ 0.66
CNTNAP3-201ENST00000297668 NMIQ13287 307 aaPredicted RBP19.17■□□□□ 0.66
CNTNAP3-201ENST00000297668 CEP112Q8N8E3 955 aa19.17■□□□□ 0.66
CNTNAP3-201ENST00000297668 NPHP3Q7Z494 1330 aa19.17■□□□□ 0.66
CNTNAP3-201ENST00000297668 POLR3AO14802 1390 aaPredicted RBP19.17■□□□□ 0.66
CNTNAP3-201ENST00000297668 SPTLC2O15270 562 aa19.17■□□□□ 0.66
CNTNAP3-201ENST00000297668 RAB3GAP1Q15042 981 aa19.17■□□□□ 0.66
CNTNAP3-201ENST00000297668 SLC9C2Q5TAH2 1124 aa19.17■□□□□ 0.66
CNTNAP3-201ENST00000297668 SPECC1LQ69YQ0 1117 aa19.17■□□□□ 0.66
CNTNAP3-201ENST00000297668 SAMM50Q9Y512 469 aa19.17■□□□□ 0.66
CNTNAP3-201ENST00000297668 TTC41PQ6P2S7 1318 aa19.17■□□□□ 0.66
CNTNAP3-201ENST00000297668 PSMA7O14818 248 aa19.16■□□□□ 0.66
CNTNAP3-201ENST00000297668 CCDC172P0C7W6 258 aa19.16■□□□□ 0.66
CNTNAP3-201ENST00000297668 GNAQP50148 359 aa19.16■□□□□ 0.66
CNTNAP3-201ENST00000297668 LINS1Q8NG48 757 aa19.16■□□□□ 0.66
CNTNAP3-201ENST00000297668 TNNQ9UQP3 1299 aa19.16■□□□□ 0.66
CNTNAP3-201ENST00000297668 RLBP1P12271 317 aa19.16■□□□□ 0.66
CNTNAP3-201ENST00000297668 TYRO3Q06418 890 aa19.16■□□□□ 0.66
CNTNAP3-201ENST00000297668 KIAA0753Q2KHM9 967 aa19.16■□□□□ 0.66
CNTNAP3-201ENST00000297668 ERMNQ8TAM6 284 aa19.16■□□□□ 0.66
CNTNAP3-201ENST00000297668 ZNF219Q9P2Y4 722 aaPredicted RBP19.16■□□□□ 0.66
CNTNAP3-201ENST00000297668 SYT1P21579 422 aa19.16■□□□□ 0.66
CNTNAP3-201ENST00000297668 GSTO1P78417 241 aa19.16■□□□□ 0.66
CNTNAP3-201ENST00000297668 PA2G4Q9UQ80 394 aaKnown RBP19.16■□□□□ 0.66
CNTNAP3-201ENST00000297668 VAMP4O75379 141 aa19.15■□□□□ 0.66
CNTNAP3-201ENST00000297668 LMOD1P29536 600 aaPredicted RBP19.15■□□□□ 0.66
CNTNAP3-201ENST00000297668 SLC39A6Q13433 755 aa19.15■□□□□ 0.66
CNTNAP3-201ENST00000297668 CEP85Q6P2H3 762 aa19.15■□□□□ 0.66
CNTNAP3-201ENST00000297668 HSF2BPO75031 334 aa19.15■□□□□ 0.66
CNTNAP3-201ENST00000297668 TUBB4AP04350 444 aa19.15■□□□□ 0.66
CNTNAP3-201ENST00000297668 TSPY3P0CV98 308 aa19.15■□□□□ 0.66
CNTNAP3-201ENST00000297668 TSPY8P0CW00 308 aa19.15■□□□□ 0.66
CNTNAP3-201ENST00000297668 AK2P54819 239 aa19.15■□□□□ 0.66
CNTNAP3-201ENST00000297668 FANCAO15360 1455 aa19.15■□□□□ 0.66
CNTNAP3-201ENST00000297668 DENND4BO75064 1496 aaPredicted RBP19.15■□□□□ 0.66
CNTNAP3-201ENST00000297668 TRIM75PA6NK02 468 aa19.15■□□□□ 0.66
CNTNAP3-201ENST00000297668 EIF4A2Q14240 407 aaKnown RBP19.15■□□□□ 0.66
CNTNAP3-201ENST00000297668 CCDC174Q6PII3 467 aa19.15■□□□□ 0.66
CNTNAP3-201ENST00000297668 NGLY1Q96IV0 654 aa19.15■□□□□ 0.66
CNTNAP3-201ENST00000297668 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.15■□□□□ 0.66
CNTNAP3-201ENST00000297668 STAMBPO95630 424 aa19.14■□□□□ 0.66
CNTNAP3-201ENST00000297668 GIGYF2Q6Y7W6 1299 aaKnown RBP19.14■□□□□ 0.66
CNTNAP3-201ENST00000297668 AKAP4Q5JQC9 854 aa19.14■□□□□ 0.65
CNTNAP3-201ENST00000297668 PAG1Q9NWQ8 432 aa19.14■□□□□ 0.65
CNTNAP3-201ENST00000297668 POLKQ9UBT6 870 aa19.14■□□□□ 0.65
CNTNAP3-201ENST00000297668 RTL1A6NKG5 1358 aa19.14■□□□□ 0.65
CNTNAP3-201ENST00000297668 ZBTB40Q9NUA8 1239 aa19.14■□□□□ 0.65
CNTNAP3-201ENST00000297668 IQSEC3Q9UPP2 1182 aaPredicted RBP19.14■□□□□ 0.65
CNTNAP3-201ENST00000297668 PLVAPQ9BX97 442 aa19.14■□□□□ 0.65
CNTNAP3-201ENST00000297668 SRRTQ9BXP5 876 aaKnown RBP19.14■□□□□ 0.65
CNTNAP3-201ENST00000297668 FERMT2Q96AC1 680 aa19.13■□□□□ 0.65
CNTNAP3-201ENST00000297668 INTS4Q96HW7 963 aaKnown RBP19.13■□□□□ 0.65
CNTNAP3-201ENST00000297668 SLU7O95391 586 aaKnown RBP19.13■□□□□ 0.65
CNTNAP3-201ENST00000297668 MCM6Q14566 821 aa19.13■□□□□ 0.65
CNTNAP3-201ENST00000297668 NBPF6Q5VWK0 638 aa19.13■□□□□ 0.65
CNTNAP3-201ENST00000297668 NBPF5PQ86XG9 351 aaPredicted RBP19.13■□□□□ 0.65
CNTNAP3-201ENST00000297668 NBPF4Q96M43 638 aa19.13■□□□□ 0.65
CNTNAP3-201ENST00000297668 TSPYL6Q8N831 410 aa19.13■□□□□ 0.65
CNTNAP3-201ENST00000297668 PUF60Q9UHX1 559 aaKnown RBP19.13■□□□□ 0.65
CNTNAP3-201ENST00000297668 NF2P35240 595 aa19.12■□□□□ 0.65
CNTNAP3-201ENST00000297668 ASIC1P78348 528 aa19.12■□□□□ 0.65
CNTNAP3-201ENST00000297668 CADPS2Q86UW7 1296 aa19.12■□□□□ 0.65
CNTNAP3-201ENST00000297668 ZGPATQ8N5A5 531 aaKnown RBP19.12■□□□□ 0.65
CNTNAP3-201ENST00000297668 ACTN2P35609 894 aa19.12■□□□□ 0.65
CNTNAP3-201ENST00000297668 NAA16Q6N069 864 aaPredicted RBP19.12■□□□□ 0.65
CNTNAP3-201ENST00000297668 PTGS1P23219 599 aa19.12■□□□□ 0.65
CNTNAP3-201ENST00000297668 HEATR3Q7Z4Q2 680 aa19.12■□□□□ 0.65
CNTNAP3-201ENST00000297668 PLEKHM2Q8IWE5 1019 aa19.12■□□□□ 0.65
CNTNAP3-201ENST00000297668 ZCRB1Q8TBF4 217 aaKnown RBP19.12■□□□□ 0.65
CNTNAP3-201ENST00000297668 DHX58Q96C10 678 aa19.12■□□□□ 0.65
CNTNAP3-201ENST00000297668 HS1BP3Q53T59 392 aa19.12■□□□□ 0.65
CNTNAP3-201ENST00000297668 CREB3L3Q68CJ9 461 aa19.12■□□□□ 0.65
CNTNAP3-201ENST00000297668 TBC1D5Q92609 795 aa19.12■□□□□ 0.65
CNTNAP3-201ENST00000297668 CCDC97Q96F63 343 aaPredicted RBP19.12■□□□□ 0.65
CNTNAP3-201ENST00000297668 DRC1Q96MC2 740 aa19.12■□□□□ 0.65
CNTNAP3-201ENST00000297668 MMRN2Q9H8L6 949 aa19.12■□□□□ 0.65
CNTNAP3-201ENST00000297668 TACC1O75410 805 aa19.11■□□□□ 0.65
CNTNAP3-201ENST00000297668 HOMER2Q9NSB8 354 aa19.11■□□□□ 0.65
CNTNAP3-201ENST00000297668 MTHFSDQ2M296 383 aaKnown RBP19.11■□□□□ 0.65
CNTNAP3-201ENST00000297668 KDM5BQ9UGL1 1544 aa19.11■□□□□ 0.65
CNTNAP3-201ENST00000297668 NUP160Q12769 1436 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms