RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 RIC1Q4ADV7 1423 aa12.22□□□□□ -0.45
CNOT9-202ENST00000295701 IBTKQ9P2D0 1353 aaPredicted RBP12.22□□□□□ -0.45
CNOT9-202ENST00000295701 MAPK8IP3Q9UPT6 1336 aa12.22□□□□□ -0.45
CNOT9-202ENST00000295701 TRAF5O00463 557 aa12.22□□□□□ -0.45
CNOT9-202ENST00000295701 HCLS1P14317 486 aaPredicted RBP12.22□□□□□ -0.45
CNOT9-202ENST00000295701 LBX1P52954 281 aa12.22□□□□□ -0.45
CNOT9-202ENST00000295701 AIMP1Q12904 312 aaKnown RBP12.22□□□□□ -0.45
CNOT9-202ENST00000295701 AOC3Q16853 763 aa12.22□□□□□ -0.45
CNOT9-202ENST00000295701 KRT24Q2M2I5 525 aa12.22□□□□□ -0.45
CNOT9-202ENST00000295701 PPP1R42Q7Z4L9 355 aa12.22□□□□□ -0.45
CNOT9-202ENST00000295701 NLRP3Q96P20 1036 aa12.22□□□□□ -0.45
CNOT9-202ENST00000295701 DDX21Q9NR30 783 aaKnown RBP eCLIP12.22□□□□□ -0.45
CNOT9-202ENST00000295701 ABT1Q9ULW3 272 aaKnown RBP12.22□□□□□ -0.45
CNOT9-202ENST00000295701 ABCC4O15439 1325 aa12.21□□□□□ -0.45
CNOT9-202ENST00000295701 RASSF10A6NK89 507 aa12.21□□□□□ -0.45
CNOT9-202ENST00000295701 PPIP5K2O43314 1243 aa12.21□□□□□ -0.45
CNOT9-202ENST00000295701 CTCFP49711 727 aaPredicted RBP12.21□□□□□ -0.45
CNOT9-202ENST00000295701 SLC10A5Q5PT55 438 aa12.21□□□□□ -0.45
CNOT9-202ENST00000295701 COPS6Q7L5N1 327 aa12.21□□□□□ -0.45
CNOT9-202ENST00000295701 UTP14AQ9BVJ6 771 aaKnown RBP12.21□□□□□ -0.45
CNOT9-202ENST00000295701 PRDM10Q9NQV6 1147 aa12.21□□□□□ -0.45
CNOT9-202ENST00000295701 ERBB4Q15303 1308 aa12.2□□□□□ -0.46
CNOT9-202ENST00000295701 WDR33Q9C0J8 1336 aaKnown RBP12.2□□□□□ -0.46
CNOT9-202ENST00000295701 POLR2AP24928 1970 aaKnown RBP12.2□□□□□ -0.46
CNOT9-202ENST00000295701 LMOD1P29536 600 aaPredicted RBP12.2□□□□□ -0.46
CNOT9-202ENST00000295701 TMPOP42166 694 aaKnown RBP12.2□□□□□ -0.46
CNOT9-202ENST00000295701 MMRN1Q13201 1228 aa12.2□□□□□ -0.46
CNOT9-202ENST00000295701 PARP10Q53GL7 1025 aa12.2□□□□□ -0.46
CNOT9-202ENST00000295701 CST9Q5W186 159 aa12.2□□□□□ -0.46
CNOT9-202ENST00000295701 NIM1KQ8IY84 436 aa12.2□□□□□ -0.46
CNOT9-202ENST00000295701 XAGE3Q8WTP9 111 aa12.2□□□□□ -0.46
CNOT9-202ENST00000295701 AIDAQ96BJ3 306 aa12.2□□□□□ -0.46
CNOT9-202ENST00000295701 GPHNQ9NQX3 736 aaPredicted RBP12.2□□□□□ -0.46
CNOT9-202ENST00000295701 ATP6V0A2Q9Y487 856 aa12.2□□□□□ -0.46
CNOT9-202ENST00000295701 ANKRD36CQ5JPF3 1778 aa12.2□□□□□ -0.46
CNOT9-202ENST00000295701 ZNF316A6NFI3 1004 aaPredicted RBP12.19□□□□□ -0.46
CNOT9-202ENST00000295701 HSPA8P11142 646 aaKnown RBP12.19□□□□□ -0.46
CNOT9-202ENST00000295701 CXCL9Q07325 125 aa12.19□□□□□ -0.46
CNOT9-202ENST00000295701 NEUROD2Q15784 382 aa12.19□□□□□ -0.46
CNOT9-202ENST00000295701 CYP4F22Q6NT55 531 aa12.19□□□□□ -0.46
CNOT9-202ENST00000295701 NLRP10Q86W26 655 aa12.19□□□□□ -0.46
CNOT9-202ENST00000295701 CCDC146Q8IYE0 955 aa12.19□□□□□ -0.46
CNOT9-202ENST00000295701 PNNQ9H307 717 aaKnown RBP12.19□□□□□ -0.46
CNOT9-202ENST00000295701 PCDHGA4Q9Y5G9 962 aa12.19□□□□□ -0.46
CNOT9-202ENST00000295701 SHTN1A0MZ66 631 aa12.18□□□□□ -0.46
CNOT9-202ENST00000295701 NUDT7P0C024 238 aa12.18□□□□□ -0.46
CNOT9-202ENST00000295701 FOXK1P85037 733 aa12.18□□□□□ -0.46
CNOT9-202ENST00000295701 GRM1Q13255 1194 aa12.18□□□□□ -0.46
CNOT9-202ENST00000295701 ZNF687Q8N1G0 1237 aa12.18□□□□□ -0.46
CNOT9-202ENST00000295701 LAS1LQ9Y4W2 734 aaKnown RBP12.18□□□□□ -0.46
CNOT9-202ENST00000295701 RAD17O75943 681 aa12.17□□□□□ -0.46
CNOT9-202ENST00000295701 GMPSP49915 693 aaPredicted RBP12.17□□□□□ -0.46
CNOT9-202ENST00000295701 TCIRG1Q13488 830 aa12.17□□□□□ -0.46
CNOT9-202ENST00000295701 GRIPAP1Q4V328 841 aa12.17□□□□□ -0.46
CNOT9-202ENST00000295701 PAXIP1Q6ZW49 1069 aaPredicted RBP12.17□□□□□ -0.46
CNOT9-202ENST00000295701 USP50Q70EL3 339 aaPredicted RBP12.17□□□□□ -0.46
CNOT9-202ENST00000295701 SP8Q8IXZ3 490 aa12.17□□□□□ -0.46
CNOT9-202ENST00000295701 PLPP6Q8IY26 295 aa12.17□□□□□ -0.46
CNOT9-202ENST00000295701 MPNDQ8N594 471 aa12.17□□□□□ -0.46
CNOT9-202ENST00000295701 RTFDC1Q9BY42 306 aaPredicted RBP12.17□□□□□ -0.46
CNOT9-202ENST00000295701 GPRC5DQ9NZD1 345 aa12.17□□□□□ -0.46
CNOT9-202ENST00000295701 TRMT112Q9UI30 125 aaKnown RBP12.17□□□□□ -0.46
CNOT9-202ENST00000295701 ZNRF3Q9ULT6 936 aa12.17□□□□□ -0.46
CNOT9-202ENST00000295701 GTPBP6O43824 516 aaPredicted RBP12.16□□□□□ -0.46
CNOT9-202ENST00000295701 AOC2O75106 756 aa12.16□□□□□ -0.46
CNOT9-202ENST00000295701 BBOX1O75936 387 aa12.16□□□□□ -0.46
CNOT9-202ENST00000295701 HIRAP54198 1017 aaPredicted RBP12.16□□□□□ -0.46
CNOT9-202ENST00000295701 DLK2Q6UY11 383 aa12.16□□□□□ -0.46
CNOT9-202ENST00000295701 DPP8Q6V1X1 898 aaPredicted RBP12.16□□□□□ -0.46
CNOT9-202ENST00000295701 CAPNS2Q96L46 248 aa12.16□□□□□ -0.46
CNOT9-202ENST00000295701 GLIS2Q9BZE0 524 aaPredicted RBP12.16□□□□□ -0.46
CNOT9-202ENST00000295701 ADARB2Q9NS39 739 aaKnown RBP12.16□□□□□ -0.46
CNOT9-202ENST00000295701 COL4A1P02462 1669 aa12.16□□□□□ -0.46
CNOT9-202ENST00000295701 DDX60Q8IY21 1712 aaKnown RBP12.15□□□□□ -0.46
CNOT9-202ENST00000295701 YDJCA8MPS7 323 aa12.15□□□□□ -0.46
CNOT9-202ENST00000295701 CHL1O00533 1208 aa12.15□□□□□ -0.46
CNOT9-202ENST00000295701 MAP2K1Q02750 393 aaPredicted RBP12.15□□□□□ -0.46
CNOT9-202ENST00000295701 GRAPQ13588 217 aa12.15□□□□□ -0.46
CNOT9-202ENST00000295701 DSG2Q14126 1118 aa12.15□□□□□ -0.46
CNOT9-202ENST00000295701 CIAPIN1Q6FI81 312 aa12.15□□□□□ -0.46
CNOT9-202ENST00000295701 DDX46Q7L014 1031 aaKnown RBP12.15□□□□□ -0.46
CNOT9-202ENST00000295701 GRAPLQ8TC17 118 aaPredicted RBP12.15□□□□□ -0.46
CNOT9-202ENST00000295701 TRPM4Q8TD43 1214 aa12.15□□□□□ -0.46
CNOT9-202ENST00000295701 TMX4Q9H1E5 349 aaPredicted RBP12.15□□□□□ -0.46
CNOT9-202ENST00000295701 BABAM1Q9NWV8 329 aa12.15□□□□□ -0.46
CNOT9-202ENST00000295701 CHPF2Q9P2E5 772 aa12.15□□□□□ -0.46
CNOT9-202ENST00000295701 TSKSQ9UJT2 592 aa12.15□□□□□ -0.46
CNOT9-202ENST00000295701 CASP8AP2Q9UKL3 1982 aa12.15□□□□□ -0.46
CNOT9-202ENST00000295701 ATP5J2-PTCD1G3V325 749 aa12.14□□□□□ -0.47
CNOT9-202ENST00000295701 CELF2O95319 508 aaKnown RBP12.14□□□□□ -0.47
CNOT9-202ENST00000295701 KIAA2012Q0VF49 1180 aa12.14□□□□□ -0.47
CNOT9-202ENST00000295701 DDX10Q13206 875 aaKnown RBP12.14□□□□□ -0.47
CNOT9-202ENST00000295701 RALBP1Q15311 655 aa12.14□□□□□ -0.47
CNOT9-202ENST00000295701 HSP90AB3PQ58FF7 597 aa12.14□□□□□ -0.47
CNOT9-202ENST00000295701 RTL5Q5HYW3 569 aaPredicted RBP12.14□□□□□ -0.47
CNOT9-202ENST00000295701 SUPT20HQ8NEM7 779 aa12.14□□□□□ -0.47
CNOT9-202ENST00000295701 FAM89AQ96GI7 184 aa12.14□□□□□ -0.47
CNOT9-202ENST00000295701 GPR101Q96P66 508 aaPredicted RBP12.14□□□□□ -0.47
CNOT9-202ENST00000295701 VPS33BQ9H267 617 aa12.14□□□□□ -0.47
CNOT9-202ENST00000295701 TLL2Q9Y6L7 1015 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms