RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ALDH1L2Q3SY69 923 aa13.93□□□□□ -0.18
SYNGAP1-201ENST00000293748 INTS5Q6P9B9 1019 aaKnown RBP13.93□□□□□ -0.18
SYNGAP1-201ENST00000293748 CYP46A1Q9Y6A2 500 aa13.93□□□□□ -0.18
SYNGAP1-201ENST00000293748 H0YIN7 160 aa13.92□□□□□ -0.18
SYNGAP1-201ENST00000293748 SERPINB2P05120 415 aa13.92□□□□□ -0.18
SYNGAP1-201ENST00000293748 USP8P40818 1118 aa13.92□□□□□ -0.18
SYNGAP1-201ENST00000293748 WASHC4Q2M389 1173 aa13.92□□□□□ -0.18
SYNGAP1-201ENST00000293748 BTAF1O14981 1849 aa13.92□□□□□ -0.18
SYNGAP1-201ENST00000293748 ANXA1P04083 346 aa13.91□□□□□ -0.18
SYNGAP1-201ENST00000293748 GNAI2P04899 355 aa13.91□□□□□ -0.18
SYNGAP1-201ENST00000293748 ERC1Q8IUD2 1116 aa13.91□□□□□ -0.18
SYNGAP1-201ENST00000293748 ZNF622Q969S3 477 aaKnown RBP eCLIP13.91□□□□□ -0.181e-6■■■■□ 21.4
SYNGAP1-201ENST00000293748 FLIIQ13045 1269 aa13.91□□□□□ -0.18
SYNGAP1-201ENST00000293748 CHD1LQ86WJ1 897 aa13.91□□□□□ -0.18
SYNGAP1-201ENST00000293748 NEUROD6Q96NK8 337 aa13.91□□□□□ -0.18
SYNGAP1-201ENST00000293748 NLRP3Q96P20 1036 aa13.91□□□□□ -0.18
SYNGAP1-201ENST00000293748 MYD88Q99836 296 aa13.91□□□□□ -0.18
SYNGAP1-201ENST00000293748 KRT24Q2M2I5 525 aa13.91□□□□□ -0.18
SYNGAP1-201ENST00000293748 KSR2Q6VAB6 950 aa13.91□□□□□ -0.18
SYNGAP1-201ENST00000293748 CWC25Q9NXE8 425 aaPredicted RBP13.91□□□□□ -0.18
SYNGAP1-201ENST00000293748 NOB1Q9ULX3 412 aaKnown RBP13.91□□□□□ -0.18
SYNGAP1-201ENST00000293748 KIF2AO00139 706 aaPredicted RBP13.9□□□□□ -0.18
SYNGAP1-201ENST00000293748 CARMIL3Q8ND23 1372 aa13.9□□□□□ -0.18
SYNGAP1-201ENST00000293748 TTLL5Q6EMB2 1281 aa13.9□□□□□ -0.18
SYNGAP1-201ENST00000293748 DNAAF4Q8WXU2 420 aa13.9□□□□□ -0.18
SYNGAP1-201ENST00000293748 KIAA0754O94854 1291 aa13.9□□□□□ -0.18
SYNGAP1-201ENST00000293748 SERPINC1P01008 464 aa13.9□□□□□ -0.18
SYNGAP1-201ENST00000293748 CT47A1Q5JQC4 288 aaPredicted RBP13.9□□□□□ -0.18
SYNGAP1-201ENST00000293748 GIGYF2Q6Y7W6 1299 aaKnown RBP13.9□□□□□ -0.18
SYNGAP1-201ENST00000293748 SLC4A9Q96Q91 983 aa13.9□□□□□ -0.18
SYNGAP1-201ENST00000293748 SART3Q15020 963 aaKnown RBP13.9□□□□□ -0.19
SYNGAP1-201ENST00000293748 SRCIN1Q9C0H9 1055 aa13.9□□□□□ -0.19
SYNGAP1-201ENST00000293748 PDCL3Q9H2J4 239 aa13.9□□□□□ -0.19
SYNGAP1-201ENST00000293748 CBFA2T2O43439 604 aa13.89□□□□□ -0.19
SYNGAP1-201ENST00000293748 PODXL2Q9NZ53 605 aa13.89□□□□□ -0.19
SYNGAP1-201ENST00000293748 DACH1Q9UI36 760 aa13.89□□□□□ -0.19
SYNGAP1-201ENST00000293748 PTPRCP08575 1304 aa13.89□□□□□ -0.19
SYNGAP1-201ENST00000293748 PRAMEF22A3QJZ6 481 aa13.89□□□□□ -0.19
SYNGAP1-201ENST00000293748 CEP57L1Q8IYX8 460 aa13.89□□□□□ -0.19
SYNGAP1-201ENST00000293748 ZSCAN31Q96LW9 406 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-201ENST00000293748 ZNHIT6Q9NWK9 470 aaKnown RBP13.89□□□□□ -0.19
SYNGAP1-201ENST00000293748 TCEAL9Q9UHQ7 104 aa13.89□□□□□ -0.19
SYNGAP1-201ENST00000293748 GYS1P13807 737 aa13.88□□□□□ -0.19
SYNGAP1-201ENST00000293748 MAP3K2Q9Y2U5 619 aa13.88□□□□□ -0.19
SYNGAP1-201ENST00000293748 CD2APQ9Y5K6 639 aa13.88□□□□□ -0.19
SYNGAP1-201ENST00000293748 NUP62CLQ9H1M0 184 aa13.88□□□□□ -0.19
SYNGAP1-201ENST00000293748 VAMP4O75379 141 aa13.88□□□□□ -0.19
SYNGAP1-201ENST00000293748 EPS15P42566 896 aa13.88□□□□□ -0.19
SYNGAP1-201ENST00000293748 CCT4P50991 539 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-201ENST00000293748 TCIRG1Q13488 830 aa13.88□□□□□ -0.19
SYNGAP1-201ENST00000293748 PPFIBP1Q86W92 1011 aa13.88□□□□□ -0.19
SYNGAP1-201ENST00000293748 LARP1BQ659C4 914 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-201ENST00000293748 C1orf115Q9H7X2 142 aa13.88□□□□□ -0.19
SYNGAP1-201ENST00000293748 DDX46Q7L014 1031 aaKnown RBP13.87□□□□□ -0.19
SYNGAP1-201ENST00000293748 VPS37DQ86XT2 251 aa13.87□□□□□ -0.19
SYNGAP1-201ENST00000293748 CNKSR1Q969H4 720 aa13.87□□□□□ -0.19
SYNGAP1-201ENST00000293748 MAGEC2Q9UBF1 373 aaPredicted RBP13.87□□□□□ -0.19
SYNGAP1-201ENST00000293748 RNF123Q5XPI4 1314 aa13.87□□□□□ -0.19
SYNGAP1-201ENST00000293748 SH3TC1Q8TE82 1336 aa13.87□□□□□ -0.19
SYNGAP1-201ENST00000293748 PI4KAP2A4QPH2 592 aa13.87□□□□□ -0.19
SYNGAP1-201ENST00000293748 TXLNAP40222 546 aa13.87□□□□□ -0.19
SYNGAP1-201ENST00000293748 TTLL7Q6ZT98 887 aa13.87□□□□□ -0.19
SYNGAP1-201ENST00000293748 PI4KAP1Q8N8J0 262 aa13.87□□□□□ -0.19
SYNGAP1-201ENST00000293748 LRRCC1Q9C099 1032 aa13.87□□□□□ -0.19
SYNGAP1-201ENST00000293748 NFIXQ14938 502 aa13.87□□□□□ -0.19
SYNGAP1-201ENST00000293748 MPNDQ8N594 471 aa13.87□□□□□ -0.19
SYNGAP1-201ENST00000293748 SCN11AQ9UI33 1791 aa13.87□□□□□ -0.19
SYNGAP1-201ENST00000293748 SOGA3Q5TF21 947 aa13.86□□□□□ -0.19
SYNGAP1-201ENST00000293748 C2CD5Q86YS7 1000 aa13.86□□□□□ -0.19
SYNGAP1-201ENST00000293748 TSPYL6Q8N831 410 aa13.86□□□□□ -0.19
SYNGAP1-201ENST00000293748 LUC7LQ9NQ29 371 aaKnown RBP13.86□□□□□ -0.19
SYNGAP1-201ENST00000293748 CFAP45Q9UL16 551 aa13.86□□□□□ -0.19
SYNGAP1-201ENST00000293748 GRIN3BO60391 1043 aa13.86□□□□□ -0.19
SYNGAP1-201ENST00000293748 ME1P48163 572 aa13.86□□□□□ -0.19
SYNGAP1-201ENST00000293748 UBXN4Q92575 508 aa13.86□□□□□ -0.19
SYNGAP1-201ENST00000293748 GOLGA6L10A6NI86 522 aa13.86□□□□□ -0.19
SYNGAP1-201ENST00000293748 RBM17Q96I25 401 aaKnown RBP13.86□□□□□ -0.19
SYNGAP1-201ENST00000293748 ALDH1B1P30837 517 aa13.86□□□□□ -0.19
SYNGAP1-201ENST00000293748 TXLNBQ8N3L3 684 aa13.86□□□□□ -0.19
SYNGAP1-201ENST00000293748 CAMTA2O94983 1202 aa13.85□□□□□ -0.19
SYNGAP1-201ENST00000293748 METTL22Q9BUU2 404 aaPredicted RBP13.85□□□□□ -0.19
SYNGAP1-201ENST00000293748 NBPF26B4DH59 902 aa13.85□□□□□ -0.19
SYNGAP1-201ENST00000293748 ODF2Q5BJF6 829 aa13.85□□□□□ -0.19
SYNGAP1-201ENST00000293748 NBPF10Q6P3W6 841 aaKnown RBP13.85□□□□□ -0.19
SYNGAP1-201ENST00000293748 NBPF15Q8N660 670 aa13.85□□□□□ -0.19
SYNGAP1-201ENST00000293748 GOLGA6L7A0A1B0GV03 622 aa13.85□□□□□ -0.19
SYNGAP1-201ENST00000293748 ATP5J2-PTCD1G3V325 749 aa13.85□□□□□ -0.19
SYNGAP1-201ENST00000293748 TGFB2P61812 414 aa13.85□□□□□ -0.19
SYNGAP1-201ENST00000293748 SPATA32Q96LK8 384 aa13.85□□□□□ -0.19
SYNGAP1-201ENST00000293748 DEF6Q9H4E7 631 aa13.85□□□□□ -0.19
SYNGAP1-201ENST00000293748 PIM2Q9P1W9 311 aa13.85□□□□□ -0.19
SYNGAP1-201ENST00000293748 BCS1LQ9Y276 419 aa13.85□□□□□ -0.19
SYNGAP1-201ENST00000293748 MCM5P33992 734 aa13.85□□□□□ -0.19
SYNGAP1-201ENST00000293748 ERLIN2O94905 339 aa13.84□□□□□ -0.19
SYNGAP1-201ENST00000293748 MAP3K11Q16584 847 aa13.84□□□□□ -0.19
SYNGAP1-201ENST00000293748 RPAP2Q8IXW5 612 aaPredicted RBP13.84□□□□□ -0.19
SYNGAP1-201ENST00000293748 LINS1Q8NG48 757 aa13.84□□□□□ -0.19
SYNGAP1-201ENST00000293748 ALDH1L1O75891 902 aa13.84□□□□□ -0.19
SYNGAP1-201ENST00000293748 CEBPZQ03701 1054 aaKnown RBP13.84□□□□□ -0.19
SYNGAP1-201ENST00000293748 CCDC43Q96MW1 224 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 215.9 ms