RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 MYOM1P52179 1685 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 CCDC160A6NGH7 325 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 MBD3O95983 291 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 WASHC5Q12768 1159 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 CCDC178Q5BJE1 867 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 ARSJQ5FYB0 599 aaPredicted RBP4.99□□□□□ -1.61
NCOA1-201ENST00000288599 CCDC73Q6ZRK6 1079 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 LUZP1Q86V48 1076 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 CCDC170Q8IYT3 715 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 EVI5LQ96CN4 794 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 TMOD4Q9NZQ9 345 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 FRMD3A2A2Y4 597 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 TYRO3Q06418 890 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 FAM47CQ5HY64 1035 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 MSL1Q68DK7 614 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 USP37Q86T82 979 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 MSANTD4Q8NCY6 345 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 DACT3Q96B18 629 aaPredicted RBP4.98□□□□□ -1.61
NCOA1-201ENST00000288599 SYTL2Q9HCH5 934 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 SMC3Q9UQE7 1217 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 POLR2DO15514 142 aaKnown RBP4.98□□□□□ -1.61
NCOA1-201ENST00000288599 BAG4O95429 457 aaKnown RBP4.98□□□□□ -1.61
NCOA1-201ENST00000288599 NUTM1Q86Y26 1132 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 FAM114A1Q8IWE2 563 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 TESK2Q96S53 571 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 PARP3Q9Y6F1 533 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 A2MP01023 1474 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 TYW5A2RUC4 315 aaKnown RBP4.98□□□□□ -1.61
NCOA1-201ENST00000288599 KRT10P13645 584 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 YAF2Q8IY57 180 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 CLASP1Q7Z460 1538 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 CCDC69A6NI79 296 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 MEI4A8MW99 385 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 DPYSL4O14531 572 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 MAFGO15525 162 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 STX6O43752 255 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 SRGAP2BP0DMP2 458 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 CABP4P57796 275 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 CALCOCO2Q13137 446 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 EIF2B5Q13144 721 aaKnown RBP4.98□□□□□ -1.61
NCOA1-201ENST00000288599 BIRC3Q13489 604 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 MAP7Q14244 749 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 ZSCAN25Q6NSZ9 544 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 NUDT18Q6ZVK8 323 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 VPS36Q86VN1 386 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 MBIPQ9NS73 344 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 DNA2P51530 1060 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 KRT83P78385 493 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 AIMP1Q12904 312 aaKnown RBP4.98□□□□□ -1.61
NCOA1-201ENST00000288599 CFAP100Q494V2 611 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 HSP90AA5PQ58FG0 334 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 CAVIN1Q6NZI2 390 aaKnown RBP4.98□□□□□ -1.61
NCOA1-201ENST00000288599 UBA5Q9GZZ9 404 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 ORC3Q9UBD5 711 aaPredicted RBP4.98□□□□□ -1.61
NCOA1-201ENST00000288599 WDR7Q9Y4E6 1490 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 POLR3GO15318 223 aaPredicted RBP4.98□□□□□ -1.61
NCOA1-201ENST00000288599 ZEB2O60315 1214 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 TIPRLO75663 272 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 PDCD2Q16342 344 aaPredicted RBP4.98□□□□□ -1.61
NCOA1-201ENST00000288599 RAB11FIP4Q86YS3 637 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 PRPF38AQ8NAV1 312 aaKnown RBP4.98□□□□□ -1.61
NCOA1-201ENST00000288599 TBC1D22AQ8WUA7 517 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 NAT10Q9H0A0 1025 aaKnown RBP4.98□□□□□ -1.61
NCOA1-201ENST00000288599 NEURL4Q96JN8 1562 aa4.98□□□□□ -1.61
NCOA1-201ENST00000288599 ZNF518AQ6AHZ1 1483 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 EXOC5O00471 708 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 NPM3O75607 178 aaKnown RBP4.97□□□□□ -1.61
NCOA1-201ENST00000288599 NPY2RP49146 381 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 CAVIN4Q5BKX8 364 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 KANK3Q6NY19 840 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 CCDC125Q86Z20 511 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 AFAP1Q8N556 730 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 CCDC114Q96M63 670 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 USP26Q9BXU7 913 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 TRIM6Q9C030 488 aaPredicted RBP4.97□□□□□ -1.61
NCOA1-201ENST00000288599 GOPCQ9HD26 462 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 ANKRD50Q9ULJ7 1429 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 ERN1O75460 977 aaKnown RBP4.97□□□□□ -1.61
NCOA1-201ENST00000288599 NANOGNBQ7Z5D8 188 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 TTC30BQ8N4P2 665 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 SDF4Q9BRK5 362 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 IMPG2Q9BZV3 1241 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 PICK1Q9NRD5 415 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 PPP1R9AQ9ULJ8 1098 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 PRAG1Q86YV5 1406 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 FSD2A1L4K1 749 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 RFC4P35249 363 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 PTPN9P43378 593 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 HDAC4P56524 1084 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 GEN1Q17RS7 908 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 SDCCAG8Q86SQ7 713 aaPredicted RBP4.97□□□□□ -1.61
NCOA1-201ENST00000288599 ABI1Q8IZP0 508 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 DDX12PQ92771 950 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 TSG101Q99816 390 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 DOLKQ9UPQ8 538 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 IQGAP1P46940 1657 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 FAM135AQ9P2D6 1515 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 HNRNPCL2B2RXH8 293 aa4.97□□□□□ -1.61
NCOA1-201ENST00000288599 HNRNPCL1O60812 293 aaKnown RBP4.97□□□□□ -1.61
NCOA1-201ENST00000288599 CSPG5O95196 566 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms