RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 TLL2Q9Y6L7 1015 aa19.56■□□□□ 0.72
PDE6D-201ENST00000287600 C6orf229H3BNL8 230 aa19.55■□□□□ 0.72
PDE6D-201ENST00000287600 CELF2O95319 508 aaKnown RBP19.55■□□□□ 0.72
PDE6D-201ENST00000287600 TRIM28Q13263 835 aaKnown RBP19.55■□□□□ 0.72
PDE6D-201ENST00000287600 MICALL2Q8IY33 904 aa19.55■□□□□ 0.72
PDE6D-201ENST00000287600 PHAXQ9H814 394 aaKnown RBP19.55■□□□□ 0.72
PDE6D-201ENST00000287600 ZNF408Q9H9D4 720 aa19.55■□□□□ 0.72
PDE6D-201ENST00000287600 DBNDD1Q9H9R9 158 aa19.55■□□□□ 0.72
PDE6D-201ENST00000287600 CNOT7Q9UIV1 285 aaKnown RBP19.55■□□□□ 0.72
PDE6D-201ENST00000287600 H7C1D1 291 aa19.54■□□□□ 0.72
PDE6D-201ENST00000287600 RIMBP2O15034 1052 aa19.54■□□□□ 0.72
PDE6D-201ENST00000287600 HSPA8P11142 646 aaKnown RBP19.54■□□□□ 0.72
PDE6D-201ENST00000287600 GPSM2P81274 684 aa19.54■□□□□ 0.72
PDE6D-201ENST00000287600 ZBTB38Q8NAP3 1195 aaPredicted RBP19.54■□□□□ 0.72
PDE6D-201ENST00000287600 EYA3Q99504 573 aa19.54■□□□□ 0.72
PDE6D-201ENST00000287600 MYD88Q99836 296 aa19.54■□□□□ 0.72
PDE6D-201ENST00000287600 BEGAINQ9BUH8 593 aa19.54■□□□□ 0.72
PDE6D-201ENST00000287600 CHMP4AQ9BY43 222 aa19.54■□□□□ 0.72
PDE6D-201ENST00000287600 MYH16Q9H6N6 1097 aa19.54■□□□□ 0.72
PDE6D-201ENST00000287600 SHTN1A0MZ66 631 aa19.53■□□□□ 0.72
PDE6D-201ENST00000287600 HSP90B1P14625 803 aaKnown RBP19.53■□□□□ 0.72
PDE6D-201ENST00000287600 HIRAP54198 1017 aaPredicted RBP19.53■□□□□ 0.72
PDE6D-201ENST00000287600 TWISTNBQ3B726 338 aaPredicted RBP19.53■□□□□ 0.72
PDE6D-201ENST00000287600 CCDC30Q5VVM6 783 aa19.53■□□□□ 0.72
PDE6D-201ENST00000287600 ZC3H15Q8WU90 426 aaKnown RBP19.53■□□□□ 0.72
PDE6D-201ENST00000287600 GPR101Q96P66 508 aaPredicted RBP19.53■□□□□ 0.72
PDE6D-201ENST00000287600 ZBTB12Q9Y330 459 aaPredicted RBP19.53■□□□□ 0.72
PDE6D-201ENST00000287600 ZNF521Q96K83 1311 aa19.52■□□□□ 0.72
PDE6D-201ENST00000287600 PSMD14O00487 310 aa19.52■□□□□ 0.72
PDE6D-201ENST00000287600 ECE2O60344 883 aa19.52■□□□□ 0.72
PDE6D-201ENST00000287600 RPS8P62241 208 aaKnown RBP19.52■□□□□ 0.72
PDE6D-201ENST00000287600 EXOSC9Q06265 439 aaKnown RBP19.52■□□□□ 0.72
PDE6D-201ENST00000287600 POLLQ9UGP5 575 aa19.52■□□□□ 0.72
PDE6D-201ENST00000287600 PGAP2Q9UHJ9 254 aa19.52■□□□□ 0.72
PDE6D-201ENST00000287600 ATXN8OSP0DMR3 200 aa19.51■□□□□ 0.71
PDE6D-201ENST00000287600 CDC37L1Q7L3B6 337 aa19.51■□□□□ 0.71
PDE6D-201ENST00000287600 SAPCD2Q86UD0 394 aa19.51■□□□□ 0.71
PDE6D-201ENST00000287600 TBC1D16Q8TBP0 767 aa19.51■□□□□ 0.71
PDE6D-201ENST00000287600 DDX58O95786 925 aaKnown RBP19.5■□□□□ 0.71
PDE6D-201ENST00000287600 DOK7Q18PE1 504 aa19.5■□□□□ 0.71
PDE6D-201ENST00000287600 CCDC152Q4G0S7 254 aa19.5■□□□□ 0.71
PDE6D-201ENST00000287600 CCDC191Q8NCU4 936 aa19.5■□□□□ 0.71
PDE6D-201ENST00000287600 DPF2Q92785 391 aa19.5■□□□□ 0.71
PDE6D-201ENST00000287600 SEC31BQ9NQW1 1179 aa19.5■□□□□ 0.71
PDE6D-201ENST00000287600 CWC25Q9NXE8 425 aaPredicted RBP19.5■□□□□ 0.71
PDE6D-201ENST00000287600 RTL9Q8NET4 1388 aa19.49■□□□□ 0.71
PDE6D-201ENST00000287600 AOC2O75106 756 aa19.49■□□□□ 0.71
PDE6D-201ENST00000287600 PCCAP05165 728 aaPredicted RBP19.49■□□□□ 0.71
PDE6D-201ENST00000287600 TBC1D10BQ4KMP7 808 aaPredicted RBP19.49■□□□□ 0.71
PDE6D-201ENST00000287600 SAMD7Q7Z3H4 446 aa19.49■□□□□ 0.71
PDE6D-201ENST00000287600 STK31Q9BXU1 1019 aa19.49■□□□□ 0.71
PDE6D-201ENST00000287600 ANKIB1Q9P2G1 1089 aa19.49■□□□□ 0.71
PDE6D-201ENST00000287600 SCN9AQ15858 1988 aa19.48■□□□□ 0.71
PDE6D-201ENST00000287600 G3V3G9 751 aa19.48■□□□□ 0.71
PDE6D-201ENST00000287600 PDE8AO60658 829 aa19.48■□□□□ 0.71
PDE6D-201ENST00000287600 UFL1O94874 794 aa19.48■□□□□ 0.71
PDE6D-201ENST00000287600 RPS12P25398 132 aaKnown RBP19.48■□□□□ 0.71
PDE6D-201ENST00000287600 DCAF8Q5TAQ9 597 aa19.48■□□□□ 0.71
PDE6D-201ENST00000287600 CCDC85AQ96PX6 553 aaPredicted RBP19.48■□□□□ 0.71
PDE6D-201ENST00000287600 METTL22Q9BUU2 404 aaPredicted RBP19.48■□□□□ 0.71
PDE6D-201ENST00000287600 ZC3H12CQ9C0D7 883 aaKnown RBP19.48■□□□□ 0.71
PDE6D-201ENST00000287600 SPEF2Q9C093 1822 aa19.47■□□□□ 0.71
PDE6D-201ENST00000287600 VAMP4O75379 141 aa19.47■□□□□ 0.71
PDE6D-201ENST00000287600 MAP2K2P36507 400 aa19.47■□□□□ 0.71
PDE6D-201ENST00000287600 POLA2Q14181 598 aa19.47■□□□□ 0.71
PDE6D-201ENST00000287600 USP48Q86UV5 1035 aa19.47■□□□□ 0.71
PDE6D-201ENST00000287600 JARID2Q92833 1246 aaPredicted RBP19.47■□□□□ 0.71
PDE6D-201ENST00000287600 HHIPL1Q96JK4 782 aa19.47■□□□□ 0.71
PDE6D-201ENST00000287600 PODXL2Q9NZ53 605 aa19.47■□□□□ 0.71
PDE6D-201ENST00000287600 GGA1Q9UJY5 639 aa19.47■□□□□ 0.71
PDE6D-201ENST00000287600 MYH3P11055 1940 aa19.47■□□□□ 0.71
PDE6D-201ENST00000287600 RBM26Q5T8P6 1007 aaKnown RBP19.46■□□□□ 0.71
PDE6D-201ENST00000287600 KCNQ5Q9NR82 932 aa19.46■□□□□ 0.71
PDE6D-201ENST00000287600 MAP3K2Q9Y2U5 619 aa19.46■□□□□ 0.71
PDE6D-201ENST00000287600 PSME4Q14997 1843 aa19.46■□□□□ 0.71
PDE6D-201ENST00000287600 E9PSI1 815 aa19.45■□□□□ 0.7
PDE6D-201ENST00000287600 EGFRP00533 1210 aa19.45■□□□□ 0.7
PDE6D-201ENST00000287600 KIF4BQ2VIQ3 1234 aa19.45■□□□□ 0.7
PDE6D-201ENST00000287600 KRT26Q7Z3Y9 468 aa19.45■□□□□ 0.7
PDE6D-201ENST00000287600 TSKSQ9UJT2 592 aa19.45■□□□□ 0.7
PDE6D-201ENST00000287600 ANKRD18AQ8IVF6 992 aa19.44■□□□□ 0.7
PDE6D-201ENST00000287600 DCPSQ96C86 337 aaKnown RBP19.44■□□□□ 0.7
PDE6D-201ENST00000287600 CDCA7LQ96GN5 454 aa19.44■□□□□ 0.7
PDE6D-201ENST00000287600 POLR2AP24928 1970 aaKnown RBP19.43■□□□□ 0.7
PDE6D-201ENST00000287600 ADM5C9JUS6 153 aa19.43■□□□□ 0.7
PDE6D-201ENST00000287600 HUNKP57058 714 aa19.43■□□□□ 0.7
PDE6D-201ENST00000287600 SLFN5Q08AF3 891 aa19.43■□□□□ 0.7
PDE6D-201ENST00000287600 NEXNQ0ZGT2 675 aa19.43■□□□□ 0.7
PDE6D-201ENST00000287600 DLK2Q6UY11 383 aa19.43■□□□□ 0.7
PDE6D-201ENST00000287600 KSR2Q6VAB6 950 aa19.43■□□□□ 0.7
PDE6D-201ENST00000287600 XDHP47989 1333 aa19.43■□□□□ 0.7
PDE6D-201ENST00000287600 PI4KAP2A4QPH2 592 aa19.42■□□□□ 0.7
PDE6D-201ENST00000287600 CA12O43570 354 aa19.42■□□□□ 0.7
PDE6D-201ENST00000287600 VIL1P09327 827 aaKnown RBP19.42■□□□□ 0.7
PDE6D-201ENST00000287600 BRPF1P55201 1214 aaPredicted RBP19.42■□□□□ 0.7
PDE6D-201ENST00000287600 CTSWP56202 376 aa19.42■□□□□ 0.7
PDE6D-201ENST00000287600 G2E3Q7L622 706 aa19.42■□□□□ 0.7
PDE6D-201ENST00000287600 PI4KAP1Q8N8J0 262 aa19.42■□□□□ 0.7
PDE6D-201ENST00000287600 ABHD8Q96I13 439 aa19.42■□□□□ 0.7
PDE6D-201ENST00000287600 CDC5LQ99459 802 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms