RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 XYLBO75191 536 aa6.37□□□□□ -1.39
CD44-202ENST00000278385 ZC3H6P61129 1189 aaKnown RBP6.37□□□□□ -1.39
CD44-202ENST00000278385 LYPD4Q6UWN0 246 aa6.37□□□□□ -1.39
CD44-202ENST00000278385 CAPN12Q6ZSI9 719 aa6.37□□□□□ -1.39
CD44-202ENST00000278385 ACDQ96AP0 544 aa6.37□□□□□ -1.39
CD44-202ENST00000278385 UBE2OQ9C0C9 1292 aaKnown RBP6.37□□□□□ -1.39
CD44-202ENST00000278385 STRN4Q9NRL3 753 aa6.37□□□□□ -1.39
CD44-202ENST00000278385 EGFL7Q9UHF1 273 aa6.37□□□□□ -1.39
CD44-202ENST00000278385 BCS1LQ9Y276 419 aa6.37□□□□□ -1.39
CD44-202ENST00000278385 ABCA5Q8WWZ7 1642 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 ERICH3Q5RHP9 1530 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 CLASP1Q7Z460 1538 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 ARAP1Q96P48 1450 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 NUP160Q12769 1436 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 KIF27Q86VH2 1401 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 LOC102724159A0A0B4J2E5 919 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 UBAP1LF5GYI3 381 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 RNF225M0QZC1 329 aaPredicted RBP6.36□□□□□ -1.39
CD44-202ENST00000278385 C2CD2LO14523 706 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 NEFLP07196 543 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 RARAP10276 462 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 USP5P45974 858 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 PWP2Q15269 919 aaKnown RBP6.36□□□□□ -1.39
CD44-202ENST00000278385 LCE2CQ5TA81 110 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 TTC39BQ5VTQ0 682 aaPredicted RBP6.36□□□□□ -1.39
CD44-202ENST00000278385 KRT25Q7Z3Z0 450 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 GPR152Q8TDT2 470 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 ZNF526Q8TF50 670 aaPredicted RBP6.36□□□□□ -1.39
CD44-202ENST00000278385 SCARF2Q96GP6 870 aaPredicted RBP6.36□□□□□ -1.39
CD44-202ENST00000278385 RBSNQ9H1K0 784 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 SLAIN2Q9P270 581 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 DMGDHQ9UI17 866 aaKnown RBP6.36□□□□□ -1.39
CD44-202ENST00000278385 RIPOR2Q9Y4F9 1068 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 CHD1O14646 1710 aa6.36□□□□□ -1.39
CD44-202ENST00000278385 PSAPP07602 524 aa6.35□□□□□ -1.39
CD44-202ENST00000278385 NFKB1P19838 968 aa6.35□□□□□ -1.39
CD44-202ENST00000278385 DNM1Q05193 864 aaKnown RBP6.35□□□□□ -1.39
CD44-202ENST00000278385 SF3A1Q15459 793 aaKnown RBP6.35□□□□□ -1.39
CD44-202ENST00000278385 C8orf34Q49A92 452 aa6.35□□□□□ -1.39
CD44-202ENST00000278385 ZNF385CQ66K41 422 aaPredicted RBP6.35□□□□□ -1.39
CD44-202ENST00000278385 ETFBKMTQ8IXQ9 262 aa6.35□□□□□ -1.39
CD44-202ENST00000278385 BEND7Q8N7W2 519 aaPredicted RBP6.35□□□□□ -1.39
CD44-202ENST00000278385 GSX2Q9BZM3 304 aa6.35□□□□□ -1.39
CD44-202ENST00000278385 ELOA3CA0A087WX78 387 aaPredicted RBP6.34□□□□□ -1.39
CD44-202ENST00000278385 ELOA3DA6NLF2 546 aaPredicted RBP6.34□□□□□ -1.39
CD44-202ENST00000278385 PHF20L1A8MW92 1017 aa6.34□□□□□ -1.39
CD44-202ENST00000278385 H3BRB1 525 aa6.34□□□□□ -1.39
CD44-202ENST00000278385 TNFRSF10BO14763 440 aa6.34□□□□□ -1.39
CD44-202ENST00000278385 SASH3O75995 380 aa6.34□□□□□ -1.39
CD44-202ENST00000278385 EPXP11678 715 aa6.34□□□□□ -1.39
CD44-202ENST00000278385 MPSTP25325 297 aa6.34□□□□□ -1.39
CD44-202ENST00000278385 EIF1AXP47813 144 aaKnown RBP6.34□□□□□ -1.39
CD44-202ENST00000278385 EHHADHQ08426 723 aa6.34□□□□□ -1.39
CD44-202ENST00000278385 ZNF211Q13398 564 aaPredicted RBP6.34□□□□□ -1.39
CD44-202ENST00000278385 ELOA3BQ3SY89 546 aa6.34□□□□□ -1.39
CD44-202ENST00000278385 GIMAP6Q6P9H5 292 aa6.34□□□□□ -1.39
CD44-202ENST00000278385 RAB44Q7Z6P3 723 aaPredicted RBP6.34□□□□□ -1.39
CD44-202ENST00000278385 ELOA3Q8NG57 546 aa6.34□□□□□ -1.39
CD44-202ENST00000278385 SLC30A3Q99726 388 aa6.34□□□□□ -1.39
CD44-202ENST00000278385 BCL2L13Q9BXK5 485 aa6.34□□□□□ -1.39
CD44-202ENST00000278385 TUT1Q9H6E5 874 aaKnown RBP6.34□□□□□ -1.39
CD44-202ENST00000278385 ANO2Q9NQ90 1003 aa6.34□□□□□ -1.39
CD44-202ENST00000278385 BIN2Q9UBW5 565 aaPredicted RBP6.34□□□□□ -1.39
CD44-202ENST00000278385 PPP1R1BQ9UD71 204 aaPredicted RBP6.34□□□□□ -1.39
CD44-202ENST00000278385 FAM177BA6PVY3 158 aa6.33□□□□□ -1.4
CD44-202ENST00000278385 OPLAHO14841 1288 aa6.33□□□□□ -1.4
CD44-202ENST00000278385 NDUFB5O43674 189 aa6.33□□□□□ -1.4
CD44-202ENST00000278385 VAMP1P23763 118 aa6.33□□□□□ -1.4
CD44-202ENST00000278385 MZF1P28698 734 aaPredicted RBP6.33□□□□□ -1.4
CD44-202ENST00000278385 SCNN1AP37088 669 aa6.33□□□□□ -1.4
CD44-202ENST00000278385 KANK3Q6NY19 840 aa6.33□□□□□ -1.4
CD44-202ENST00000278385 NLRP13Q86W25 1043 aa6.33□□□□□ -1.4
CD44-202ENST00000278385 MICALL1Q8N3F8 863 aa6.33□□□□□ -1.4
CD44-202ENST00000278385 TMC1Q8TDI8 760 aa6.33□□□□□ -1.4
CD44-202ENST00000278385 WHAMMQ8TF30 809 aa6.33□□□□□ -1.4
CD44-202ENST00000278385 SPACA7Q96KW9 195 aa6.33□□□□□ -1.4
CD44-202ENST00000278385 MKL2Q9ULH7 1088 aa6.33□□□□□ -1.4
CD44-202ENST00000278385 ADAMTS8Q9UP79 889 aa6.33□□□□□ -1.4
CD44-202ENST00000278385 CARMIL1Q5VZK9 1371 aa6.32□□□□□ -1.4
CD44-202ENST00000278385 ADAMTS12P58397 1594 aa6.32□□□□□ -1.4
CD44-202ENST00000278385 SPDYE3A6NKU9 549 aa6.32□□□□□ -1.4
CD44-202ENST00000278385 ICMTO60725 284 aa6.32□□□□□ -1.4
CD44-202ENST00000278385 MAP3K6O95382 1288 aa6.32□□□□□ -1.4
CD44-202ENST00000278385 EGFRP00533 1210 aa6.32□□□□□ -1.4
CD44-202ENST00000278385 ADH7P40394 386 aa6.32□□□□□ -1.4
CD44-202ENST00000278385 PLAURQ03405 335 aa6.32□□□□□ -1.4
CD44-202ENST00000278385 MTMR3Q13615 1198 aa6.32□□□□□ -1.4
CD44-202ENST00000278385 NAALADL2Q58DX5 795 aa6.32□□□□□ -1.4
CD44-202ENST00000278385 PHLDB3Q6NSJ2 640 aa6.32□□□□□ -1.4
CD44-202ENST00000278385 ZNF438Q7Z4V0 828 aa6.32□□□□□ -1.4
CD44-202ENST00000278385 EDEM1Q92611 657 aa6.32□□□□□ -1.4
CD44-202ENST00000278385 TNFRSF25Q93038 417 aa6.32□□□□□ -1.4
CD44-202ENST00000278385 NUDT16Q96DE0 195 aaKnown RBP6.32□□□□□ -1.4
CD44-202ENST00000278385 BTBD6Q96KE9 485 aa6.32□□□□□ -1.4
CD44-202ENST00000278385 USP20Q9Y2K6 914 aa6.32□□□□□ -1.4
CD44-202ENST00000278385 PBRM1Q86U86 1689 aa6.32□□□□□ -1.4
CD44-202ENST00000278385 ADARB2-AS1A8MUL3 147 aa6.31□□□□□ -1.4
CD44-202ENST00000278385 GHRHP01286 108 aa6.31□□□□□ -1.4
CD44-202ENST00000278385 TARSP26639 723 aaKnown RBP6.31□□□□□ -1.4
CD44-202ENST00000278385 SERPINB4P48594 390 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms