RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 RANBP6O60518 1105 aaKnown RBP16.75■□□□□ 0.27
TMEM47-201ENST00000275954 RUFY3Q7L099 469 aa16.75■□□□□ 0.27
TMEM47-201ENST00000275954 INTS4Q96HW7 963 aaKnown RBP16.75■□□□□ 0.27
TMEM47-201ENST00000275954 GLI2P10070 1586 aa16.75■□□□□ 0.27
TMEM47-201ENST00000275954 WDR17Q8IZU2 1322 aa16.75■□□□□ 0.27
TMEM47-201ENST00000275954 ECM2O94769 699 aaPredicted RBP16.75■□□□□ 0.27
TMEM47-201ENST00000275954 ZBTB1Q9Y2K1 713 aa16.74■□□□□ 0.27
TMEM47-201ENST00000275954 RAD50Q92878 1312 aa16.74■□□□□ 0.27
TMEM47-201ENST00000275954 RIMBP2O15034 1052 aa16.74■□□□□ 0.27
TMEM47-201ENST00000275954 RXRAP19793 462 aa16.74■□□□□ 0.27
TMEM47-201ENST00000275954 ZSCAN29Q8IWY8 852 aaPredicted RBP16.74■□□□□ 0.27
TMEM47-201ENST00000275954 LMBRD1Q9NUN5 540 aa16.74■□□□□ 0.27
TMEM47-201ENST00000275954 TNNI3KQ59H18 835 aa16.74■□□□□ 0.27
TMEM47-201ENST00000275954 RASEFQ8IZ41 740 aa16.74■□□□□ 0.27
TMEM47-201ENST00000275954 FPGT-TNNI3KV9GXZ4 949 aa16.74■□□□□ 0.27
TMEM47-201ENST00000275954 CDKL5O76039 1030 aa16.73■□□□□ 0.27
TMEM47-201ENST00000275954 TPM2P07951 284 aa16.73■□□□□ 0.27
TMEM47-201ENST00000275954 SEC62Q99442 399 aaKnown RBP16.73■□□□□ 0.27
TMEM47-201ENST00000275954 TRIM34Q9BYJ4 488 aa16.73■□□□□ 0.27
TMEM47-201ENST00000275954 A0A1B0GUL7 405 aa16.73■□□□□ 0.27
TMEM47-201ENST00000275954 TRAPPC3LQ5T215 181 aa16.73■□□□□ 0.27
TMEM47-201ENST00000275954 PIGBQ92521 554 aa16.73■□□□□ 0.27
TMEM47-201ENST00000275954 TULP4Q9NRJ4 1543 aa16.73■□□□□ 0.27
TMEM47-201ENST00000275954 HSPA4P34932 840 aa16.72■□□□□ 0.27
TMEM47-201ENST00000275954 PDE4CQ08493 712 aa16.72■□□□□ 0.27
TMEM47-201ENST00000275954 ANKRD20A12PQ8NF67 263 aa16.72■□□□□ 0.27
TMEM47-201ENST00000275954 SLC27A2O14975 620 aa16.72■□□□□ 0.27
TMEM47-201ENST00000275954 CCAR1Q8IX12 1150 aaKnown RBP16.72■□□□□ 0.27
TMEM47-201ENST00000275954 TMEM63CQ9P1W3 806 aa16.72■□□□□ 0.27
TMEM47-201ENST00000275954 NEURL1BA8MQ27 555 aa16.72■□□□□ 0.27
TMEM47-201ENST00000275954 SLC5A1P13866 664 aa16.72■□□□□ 0.27
TMEM47-201ENST00000275954 CARD10Q9BWT7 1032 aa16.72■□□□□ 0.27
TMEM47-201ENST00000275954 NCOA5Q9HCD5 579 aaKnown RBP16.72■□□□□ 0.27
TMEM47-201ENST00000275954 SLC12A7Q9Y666 1083 aa16.72■□□□□ 0.27
TMEM47-201ENST00000275954 ADGRB3O60242 1522 aa16.72■□□□□ 0.27
TMEM47-201ENST00000275954 GOLGA8AA7E2F4 631 aa16.71■□□□□ 0.27
TMEM47-201ENST00000275954 LOC102724428A0A0B4J2F2 783 aa16.71■□□□□ 0.27
TMEM47-201ENST00000275954 SIK1P57059 783 aa16.71■□□□□ 0.27
TMEM47-201ENST00000275954 TMEM67Q5HYA8 995 aa16.71■□□□□ 0.27
TMEM47-201ENST00000275954 TEX13AQ9BXU3 409 aaPredicted RBP16.71■□□□□ 0.27
TMEM47-201ENST00000275954 IBTKQ9P2D0 1353 aaPredicted RBP16.71■□□□□ 0.27
TMEM47-201ENST00000275954 C1orf167Q5SNV9 1468 aa16.71■□□□□ 0.26
TMEM47-201ENST00000275954 PNPLA6Q8IY17 1366 aa16.71■□□□□ 0.26
TMEM47-201ENST00000275954 IRS4O14654 1257 aaPredicted RBP16.7■□□□□ 0.26
TMEM47-201ENST00000275954 CLCN1P35523 988 aa16.7■□□□□ 0.26
TMEM47-201ENST00000275954 MNS1Q8NEH6 495 aa16.7■□□□□ 0.26
TMEM47-201ENST00000275954 NCOA7Q8NI08 942 aa16.7■□□□□ 0.26
TMEM47-201ENST00000275954 TLR7Q9NYK1 1049 aaKnown RBP16.7■□□□□ 0.26
TMEM47-201ENST00000275954 A0A0D9SFI3 127 aa16.7■□□□□ 0.26
TMEM47-201ENST00000275954 TAF5LO75529 589 aa16.7■□□□□ 0.26
TMEM47-201ENST00000275954 PDIA4P13667 645 aaKnown RBP16.7■□□□□ 0.26
TMEM47-201ENST00000275954 KLHL10Q6JEL2 608 aa16.7■□□□□ 0.26
TMEM47-201ENST00000275954 FAM196AQ6ZSG2 479 aa16.7■□□□□ 0.26
TMEM47-201ENST00000275954 KRT27Q7Z3Y8 459 aa16.7■□□□□ 0.26
TMEM47-201ENST00000275954 SMARCC1Q92922 1105 aaPredicted RBP16.7■□□□□ 0.26
TMEM47-201ENST00000275954 DDX19AQ9NUU7 478 aaKnown RBP16.7■□□□□ 0.26
TMEM47-201ENST00000275954 TRMT1Q9NXH9 659 aaKnown RBP16.7■□□□□ 0.26
TMEM47-201ENST00000275954 PLBD2Q8NHP8 589 aa16.7■□□□□ 0.26
TMEM47-201ENST00000275954 MCM5P33992 734 aa16.7■□□□□ 0.26
TMEM47-201ENST00000275954 CFAP100Q494V2 611 aa16.7■□□□□ 0.26
TMEM47-201ENST00000275954 SLC3A2P08195 630 aaKnown RBP16.69■□□□□ 0.26
TMEM47-201ENST00000275954 ATF5Q9Y2D1 282 aaPredicted RBP16.69■□□□□ 0.26
TMEM47-201ENST00000275954 MARCKSP29966 332 aaPredicted RBP16.69■□□□□ 0.26
TMEM47-201ENST00000275954 IARSP41252 1262 aaKnown RBP16.69■□□□□ 0.26
TMEM47-201ENST00000275954 HSP90AA4PQ58FG1 418 aa16.69■□□□□ 0.26
TMEM47-201ENST00000275954 CAVIN4Q5BKX8 364 aa16.69■□□□□ 0.26
TMEM47-201ENST00000275954 C16orf45Q96MC5 204 aaPredicted RBP16.69■□□□□ 0.26
TMEM47-201ENST00000275954 DNAJC25Q9H1X3 360 aa16.69■□□□□ 0.26
TMEM47-201ENST00000275954 KIF24Q5T7B8 1368 aa16.69■□□□□ 0.26
TMEM47-201ENST00000275954 EYA2O00167 538 aa16.69■□□□□ 0.26
TMEM47-201ENST00000275954 ADCK5Q3MIX3 580 aa16.69■□□□□ 0.26
TMEM47-201ENST00000275954 ANO6Q4KMQ2 910 aa16.69■□□□□ 0.26
TMEM47-201ENST00000275954 OTUD7BQ6GQQ9 843 aa16.69■□□□□ 0.26
TMEM47-201ENST00000275954 NLRP3Q96P20 1036 aa16.69■□□□□ 0.26
TMEM47-201ENST00000275954 SLC26A6Q9BXS9 759 aa16.69■□□□□ 0.26
TMEM47-201ENST00000275954 CLIP2Q9UDT6 1046 aa16.69■□□□□ 0.26
TMEM47-201ENST00000275954 SRP68Q9UHB9 627 aaKnown RBP16.69■□□□□ 0.26
TMEM47-201ENST00000275954 CDK12Q9NYV4 1490 aaPredicted RBP16.68■□□□□ 0.26
TMEM47-201ENST00000275954 JAK2O60674 1132 aa16.68■□□□□ 0.26
TMEM47-201ENST00000275954 METAP2P50579 478 aaKnown RBP eCLIP16.68■□□□□ 0.26
TMEM47-201ENST00000275954 RBM26Q5T8P6 1007 aaKnown RBP16.68■□□□□ 0.26
TMEM47-201ENST00000275954 PRC1O43663 620 aa16.68■□□□□ 0.26
TMEM47-201ENST00000275954 IKQ13123 557 aaPredicted RBP16.68■□□□□ 0.26
TMEM47-201ENST00000275954 ANO10Q9NW15 660 aa16.68■□□□□ 0.26
TMEM47-201ENST00000275954 IPO7O95373 1038 aaKnown RBP16.67■□□□□ 0.26
TMEM47-201ENST00000275954 DHX32Q7L7V1 743 aaKnown RBP16.67■□□□□ 0.26
TMEM47-201ENST00000275954 SYNE4Q8N205 404 aa16.67■□□□□ 0.26
TMEM47-201ENST00000275954 MIGA1Q8NAN2 632 aa16.67■□□□□ 0.26
TMEM47-201ENST00000275954 PTPDC1A2A3K4 754 aa16.67■□□□□ 0.26
TMEM47-201ENST00000275954 RNF113AO15541 343 aaKnown RBP16.67■□□□□ 0.26
TMEM47-201ENST00000275954 CCDC112Q8NEF3 446 aa16.67■□□□□ 0.26
TMEM47-201ENST00000275954 BRD1O95696 1058 aa16.67■□□□□ 0.26
TMEM47-201ENST00000275954 GRM1Q13255 1194 aa16.67■□□□□ 0.26
TMEM47-201ENST00000275954 ME3Q16798 604 aa16.67■□□□□ 0.26
TMEM47-201ENST00000275954 CCDC47Q96A33 483 aaKnown RBP16.66■□□□□ 0.26
TMEM47-201ENST00000275954 USPL1Q5W0Q7 1092 aa16.66■□□□□ 0.26
TMEM47-201ENST00000275954 PSDA5PKW4 1024 aaPredicted RBP16.66■□□□□ 0.26
TMEM47-201ENST00000275954 RPS6KB1P23443 525 aa16.66■□□□□ 0.26
TMEM47-201ENST00000275954 MFSD6Q6ZSS7 791 aa16.65■□□□□ 0.26
TMEM47-201ENST00000275954 LUZP1Q86V48 1076 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms