RNA–Protein interactions for RNA: ENST00000274026.9

CCNA2-201, Transcript of cyclin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNA2, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2-201ENST00000274026 NEK1Q96PY6 1258 aa19.36■□□□□ 0.69
CCNA2-201ENST00000274026 C9orf78Q9NZ63 289 aaPredicted RBP19.36■□□□□ 0.69
CCNA2-201ENST00000274026 TPM4P67936 248 aa19.35■□□□□ 0.69
CCNA2-201ENST00000274026 Q6ZUG5 572 aa19.35■□□□□ 0.69
CCNA2-201ENST00000274026 FSIP1Q8NA03 581 aa19.35■□□□□ 0.69
CCNA2-201ENST00000274026 UBXN4Q92575 508 aa19.35■□□□□ 0.69
CCNA2-201ENST00000274026 CHMP4AQ9BY43 222 aa19.35■□□□□ 0.69
CCNA2-201ENST00000274026 CCDC8Q9H0W5 538 aaPredicted RBP19.35■□□□□ 0.69
CCNA2-201ENST00000274026 MYH15Q9Y2K3 1946 aa19.35■□□□□ 0.69
CCNA2-201ENST00000274026 ROBO2Q9HCK4 1378 aa19.35■□□□□ 0.69
CCNA2-201ENST00000274026 TAF5LO75529 589 aa19.35■□□□□ 0.69
CCNA2-201ENST00000274026 NUTM2GQ5VZR2 741 aa19.35■□□□□ 0.69
CCNA2-201ENST00000274026 USPL1Q5W0Q7 1092 aa19.35■□□□□ 0.69
CCNA2-201ENST00000274026 TMC6Q7Z403 805 aa19.35■□□□□ 0.69
CCNA2-201ENST00000274026 SMARCC2Q8TAQ2 1214 aa19.35■□□□□ 0.69
CCNA2-201ENST00000274026 BOLA2Q9H3K6 86 aa19.35■□□□□ 0.69
CCNA2-201ENST00000274026 ORC3Q9UBD5 711 aaPredicted RBP19.35■□□□□ 0.69
CCNA2-201ENST00000274026 HOXB7P09629 217 aa19.34■□□□□ 0.69
CCNA2-201ENST00000274026 ATL3Q6DD88 541 aa19.34■□□□□ 0.69
CCNA2-201ENST00000274026 FBXW7Q969H0 707 aa19.34■□□□□ 0.69
CCNA2-201ENST00000274026 USP28Q96RU2 1077 aa19.34■□□□□ 0.69
CCNA2-201ENST00000274026 XPO4Q9C0E2 1151 aaKnown RBP19.34■□□□□ 0.69
CCNA2-201ENST00000274026 SASH1O94885 1247 aa19.34■□□□□ 0.69
CCNA2-201ENST00000274026 EIF4A1P60842 406 aaKnown RBP19.34■□□□□ 0.69
CCNA2-201ENST00000274026 CYB5RLQ6IPT4 315 aa19.34■□□□□ 0.69
CCNA2-201ENST00000274026 ZNF396Q96N95 335 aaPredicted RBP19.34■□□□□ 0.69
CCNA2-201ENST00000274026 LLPHQ9BRT6 129 aaKnown RBP19.34■□□□□ 0.69
CCNA2-201ENST00000274026 HDAC5Q9UQL6 1122 aa19.34■□□□□ 0.69
CCNA2-201ENST00000274026 SMC2O95347 1197 aa19.33■□□□□ 0.69
CCNA2-201ENST00000274026 ETF1P62495 437 aaKnown RBP19.33■□□□□ 0.69
CCNA2-201ENST00000274026 HOMER1Q86YM7 354 aa19.33■□□□□ 0.69
CCNA2-201ENST00000274026 ERCC4Q92889 916 aaPredicted RBP19.33■□□□□ 0.69
CCNA2-201ENST00000274026 TRERF1Q96PN7 1200 aa19.33■□□□□ 0.69
CCNA2-201ENST00000274026 PHLPP2Q6ZVD8 1323 aa19.33■□□□□ 0.68
CCNA2-201ENST00000274026 ME1P48163 572 aa19.33■□□□□ 0.68
CCNA2-201ENST00000274026 SCRN1Q12765 414 aa19.33■□□□□ 0.68
CCNA2-201ENST00000274026 IFNKQ9P0W0 207 aa19.33■□□□□ 0.68
CCNA2-201ENST00000274026 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.33■□□□□ 0.68
CCNA2-201ENST00000274026 ALDH1L1O75891 902 aa19.32■□□□□ 0.68
CCNA2-201ENST00000274026 G3BP1Q13283 466 aaKnown RBP eCLIP19.32■□□□□ 0.68
CCNA2-201ENST00000274026 GORABQ5T7V8 394 aa19.32■□□□□ 0.68
CCNA2-201ENST00000274026 CCP110O43303 1012 aa19.32■□□□□ 0.68
CCNA2-201ENST00000274026 ANXA1P04083 346 aa19.32■□□□□ 0.68
CCNA2-201ENST00000274026 TXLNBQ8N3L3 684 aa19.32■□□□□ 0.68
CCNA2-201ENST00000274026 BPIFA3Q9BQP9 254 aa19.32■□□□□ 0.68
CCNA2-201ENST00000274026 SDF4Q9BRK5 362 aa19.32■□□□□ 0.68
CCNA2-201ENST00000274026 TLR7Q9NYK1 1049 aaKnown RBP19.32■□□□□ 0.68
CCNA2-201ENST00000274026 POLR3GO15318 223 aaPredicted RBP19.32■□□□□ 0.68
CCNA2-201ENST00000274026 RAD51AP2Q09MP3 1159 aa19.32■□□□□ 0.68
CCNA2-201ENST00000274026 SRRTQ9BXP5 876 aaKnown RBP19.32■□□□□ 0.68
CCNA2-201ENST00000274026 FEZ2Q9UHY8 353 aaPredicted RBP19.32■□□□□ 0.68
CCNA2-201ENST00000274026 DNAI1Q9UI46 699 aa19.32■□□□□ 0.68
CCNA2-201ENST00000274026 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.31■□□□□ 0.68
CCNA2-201ENST00000274026 ATP8B1O43520 1251 aa19.31■□□□□ 0.68
CCNA2-201ENST00000274026 FOSBP53539 338 aa19.31■□□□□ 0.68
CCNA2-201ENST00000274026 FMR1NBQ8N0W7 255 aaPredicted RBP19.31■□□□□ 0.68
CCNA2-201ENST00000274026 MNS1Q8NEH6 495 aa19.31■□□□□ 0.68
CCNA2-201ENST00000274026 ZRSR1Q15695 479 aaKnown RBP19.31■□□□□ 0.68
CCNA2-201ENST00000274026 NSUN7Q8NE18 718 aaKnown RBP19.31■□□□□ 0.68
CCNA2-201ENST00000274026 PTPRUQ92729 1446 aa19.31■□□□□ 0.68
CCNA2-201ENST00000274026 PFKFB2O60825 505 aa19.3■□□□□ 0.68
CCNA2-201ENST00000274026 MRPS27Q92552 414 aaKnown RBP19.3■□□□□ 0.68
CCNA2-201ENST00000274026 TPM1P09493 284 aa19.3■□□□□ 0.68
CCNA2-201ENST00000274026 DPCR1Q3MIW9 517 aa19.3■□□□□ 0.68
CCNA2-201ENST00000274026 NEK11Q8NG66 645 aa19.3■□□□□ 0.68
CCNA2-201ENST00000274026 TADA3O75528 432 aa19.29■□□□□ 0.68
CCNA2-201ENST00000274026 NWD1Q149M9 1564 aa19.29■□□□□ 0.68
CCNA2-201ENST00000274026 MUM1L1Q5H9M0 696 aa19.29■□□□□ 0.68
CCNA2-201ENST00000274026 TRIM34Q9BYJ4 488 aa19.29■□□□□ 0.68
CCNA2-201ENST00000274026 UBXN6Q9BZV1 441 aa19.29■□□□□ 0.68
CCNA2-201ENST00000274026 KIAA1468Q9P260 1216 aa19.29■□□□□ 0.68
CCNA2-201ENST00000274026 MAP3K2Q9Y2U5 619 aa19.29■□□□□ 0.68
CCNA2-201ENST00000274026 HDGFP51858 240 aaKnown RBP19.29■□□□□ 0.68
CCNA2-201ENST00000274026 CEMIPQ8WUJ3 1361 aa19.29■□□□□ 0.68
CCNA2-201ENST00000274026 EFCAB8A8MWE9 144 aa19.28■□□□□ 0.68
CCNA2-201ENST00000274026 HOXC9P31274 260 aa19.28■□□□□ 0.68
CCNA2-201ENST00000274026 LRRC2Q9BYS8 371 aa19.28■□□□□ 0.68
CCNA2-201ENST00000274026 PCDHA7Q9UN72 937 aa19.28■□□□□ 0.68
CCNA2-201ENST00000274026 U3KPZ7 1027 aaPredicted RBP19.28■□□□□ 0.68
CCNA2-201ENST00000274026 PTPDC1A2A3K4 754 aa19.27■□□□□ 0.68
CCNA2-201ENST00000274026 MAPK8IP2Q13387 824 aaPredicted RBP19.27■□□□□ 0.68
CCNA2-201ENST00000274026 CCDC158Q5M9N0 1113 aa19.27■□□□□ 0.68
CCNA2-201ENST00000274026 ADALQ6DHV7 355 aa19.27■□□□□ 0.68
CCNA2-201ENST00000274026 TRIM65Q6PJ69 517 aa19.27■□□□□ 0.68
CCNA2-201ENST00000274026 COL15A1P39059 1388 aa19.27■□□□□ 0.68
CCNA2-201ENST00000274026 SEC31AO94979 1220 aaKnown RBP19.27■□□□□ 0.68
CCNA2-201ENST00000274026 CTDNEP1O95476 244 aa19.27■□□□□ 0.68
CCNA2-201ENST00000274026 GPS2Q13227 327 aa19.27■□□□□ 0.68
CCNA2-201ENST00000274026 LRRFIP1Q32MZ4 808 aaKnown RBP19.27■□□□□ 0.68
CCNA2-201ENST00000274026 A0A1B0GVL5 298 aa19.27■□□□□ 0.67
CCNA2-201ENST00000274026 URI1O94763 535 aaPredicted RBP19.27■□□□□ 0.67
CCNA2-201ENST00000274026 CWF19L2Q2TBE0 894 aaKnown RBP19.27■□□□□ 0.67
CCNA2-201ENST00000274026 CARD6Q9BX69 1037 aa19.27■□□□□ 0.67
CCNA2-201ENST00000274026 DBF4Q9UBU7 674 aaPredicted RBP19.27■□□□□ 0.67
CCNA2-201ENST00000274026 A0A1W2PQ27 194 aa19.26■□□□□ 0.67
CCNA2-201ENST00000274026 A0A1W2PQ64 194 aa19.26■□□□□ 0.67
CCNA2-201ENST00000274026 A0A1W2PQD8 194 aa19.26■□□□□ 0.67
CCNA2-201ENST00000274026 CYP21A2P08686 494 aa19.26■□□□□ 0.67
CCNA2-201ENST00000274026 ST5P78524 1137 aa19.26■□□□□ 0.67
CCNA2-201ENST00000274026 SMARCE1Q969G3 411 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms