RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ZSCAN16Q9H4T2 348 aaPredicted RBP10.25□□□□□ -0.77
VAPB-201ENST00000265619 ARHGAP23Q9P227 1491 aa10.25□□□□□ -0.77
VAPB-201ENST00000265619 TECPR2O15040 1411 aa10.25□□□□□ -0.77
VAPB-201ENST00000265619 SLC4A10Q6U841 1118 aa10.25□□□□□ -0.77
VAPB-201ENST00000265619 SUGCTQ9HAC7 445 aa10.25□□□□□ -0.77
VAPB-201ENST00000265619 SALL3Q9BXA9 1300 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 HOXC9P31274 260 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 ANAPC15P60006 121 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 MTHFSDQ2M296 383 aaKnown RBP10.24□□□□□ -0.77
VAPB-201ENST00000265619 RNF20Q5VTR2 975 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 ISM2Q6H9L7 571 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 IQUBQ8NA54 791 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 DONSONQ9NYP3 566 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 CWC15Q9P013 229 aaKnown RBP10.24□□□□□ -0.77
VAPB-201ENST00000265619 SLIT1O75093 1534 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 MCCP23508 829 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 CDC25BP30305 580 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 HSPA4P34932 840 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 GOLGA8FQ08AF8 430 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 GOLGA8DPQ0D2H9 430 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 WWC2Q6AWC2 1192 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 RBM43Q6ZSC3 357 aaKnown RBP10.24□□□□□ -0.77
VAPB-201ENST00000265619 CLSTN2Q9H4D0 955 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 C19orf44Q9H6X5 657 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 VPS18Q9P253 973 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 EIF2S2P20042 333 aaKnown RBP10.24□□□□□ -0.77
VAPB-201ENST00000265619 EVCP57679 992 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 ADCK5Q3MIX3 580 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 EGFL6Q8IUX8 553 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 DHX40Q8IX18 779 aaKnown RBP10.24□□□□□ -0.77
VAPB-201ENST00000265619 STRN4Q9NRL3 753 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 TSPYL4Q9UJ04 414 aa10.24□□□□□ -0.77
VAPB-201ENST00000265619 CDC42BPGQ6DT37 1551 aa10.23□□□□□ -0.77
VAPB-201ENST00000265619 GPS2Q13227 327 aa10.23□□□□□ -0.77
VAPB-201ENST00000265619 FAM177A1Q8N128 213 aaPredicted RBP10.23□□□□□ -0.77
VAPB-201ENST00000265619 EXOC4Q96A65 974 aa10.23□□□□□ -0.77
VAPB-201ENST00000265619 OSBPL3Q9H4L5 887 aa10.23□□□□□ -0.77
VAPB-201ENST00000265619 URI1O94763 535 aaPredicted RBP10.23□□□□□ -0.77
VAPB-201ENST00000265619 GCP02774 474 aa10.23□□□□□ -0.77
VAPB-201ENST00000265619 TRIM65Q6PJ69 517 aa10.23□□□□□ -0.77
VAPB-201ENST00000265619 GOLGA6L1Q8N7Z2 621 aa10.23□□□□□ -0.77
VAPB-201ENST00000265619 PDE11AQ9HCR9 933 aa10.23□□□□□ -0.77
VAPB-201ENST00000265619 LRRC7Q96NW7 1537 aa10.23□□□□□ -0.77
VAPB-201ENST00000265619 IRF6O14896 467 aa10.23□□□□□ -0.77
VAPB-201ENST00000265619 CORO7P57737 925 aa10.23□□□□□ -0.77
VAPB-201ENST00000265619 MRFAP1L1Q96HT8 127 aa10.23□□□□□ -0.77
VAPB-201ENST00000265619 DEF6Q9H4E7 631 aa10.23□□□□□ -0.77
VAPB-201ENST00000265619 AKAP2Q9Y2D5 859 aa10.23□□□□□ -0.77
VAPB-201ENST00000265619 TTC21AQ8NDW8 1320 aa10.22□□□□□ -0.77
VAPB-201ENST00000265619 LRRC31Q6UY01 552 aa10.22□□□□□ -0.77
VAPB-201ENST00000265619 PARD6BQ9BYG5 372 aa10.22□□□□□ -0.77
VAPB-201ENST00000265619 LIMCH1Q9UPQ0 1083 aa10.22□□□□□ -0.77
VAPB-201ENST00000265619 KIF20BQ96Q89 1820 aa10.22□□□□□ -0.77
VAPB-201ENST00000265619 ITSN1Q15811 1721 aa10.22□□□□□ -0.77
VAPB-201ENST00000265619 SCP2P22307 547 aa10.22□□□□□ -0.77
VAPB-201ENST00000265619 PIP4K2BP78356 416 aa10.22□□□□□ -0.77
VAPB-201ENST00000265619 MCTP2Q6DN12 878 aa10.22□□□□□ -0.77
VAPB-201ENST00000265619 MPRIPQ6WCQ1 1025 aa10.22□□□□□ -0.77
VAPB-201ENST00000265619 SRRTQ9BXP5 876 aaKnown RBP10.22□□□□□ -0.77
VAPB-201ENST00000265619 HYPKQ9NX55 129 aa10.22□□□□□ -0.77
VAPB-201ENST00000265619 PARP3Q9Y6F1 533 aa10.22□□□□□ -0.77
VAPB-201ENST00000265619 ME3Q16798 604 aa10.21□□□□□ -0.77
VAPB-201ENST00000265619 SARM1Q6SZW1 724 aa10.21□□□□□ -0.77
VAPB-201ENST00000265619 FAM43BQ6ZT52 329 aaPredicted RBP10.21□□□□□ -0.77
VAPB-201ENST00000265619 AK7Q96M32 723 aa10.21□□□□□ -0.77
VAPB-201ENST00000265619 SPG7Q9UQ90 795 aa10.21□□□□□ -0.77
VAPB-201ENST00000265619 ELP1O95163 1332 aa10.21□□□□□ -0.77
VAPB-201ENST00000265619 ZNF142P52746 1687 aaPredicted RBP10.21□□□□□ -0.77
VAPB-201ENST00000265619 ADCY9O60503 1353 aa10.21□□□□□ -0.77
VAPB-201ENST00000265619 PHACTR2O75167 634 aa10.21□□□□□ -0.77
VAPB-201ENST00000265619 IL17RAQ96F46 866 aa10.21□□□□□ -0.77
VAPB-201ENST00000265619 ARGLU1Q9NWB6 273 aaPredicted RBP10.21□□□□□ -0.77
VAPB-201ENST00000265619 FAN1Q9Y2M0 1017 aa10.21□□□□□ -0.77
VAPB-201ENST00000265619 GNAI1P63096 354 aa10.21□□□□□ -0.78
VAPB-201ENST00000265619 CCDC30Q5VVM6 783 aa10.21□□□□□ -0.78
VAPB-201ENST00000265619 KCNV1Q6PIU1 500 aa10.21□□□□□ -0.78
VAPB-201ENST00000265619 HOMER1Q86YM7 354 aa10.21□□□□□ -0.78
VAPB-201ENST00000265619 RPAP2Q8IXW5 612 aaPredicted RBP10.21□□□□□ -0.78
VAPB-201ENST00000265619 RNF217Q8TC41 542 aa10.21□□□□□ -0.78
VAPB-201ENST00000265619 LEO1Q8WVC0 666 aaPredicted RBP10.21□□□□□ -0.78
VAPB-201ENST00000265619 SGSM3Q96HU1 749 aa10.21□□□□□ -0.78
VAPB-201ENST00000265619 FTOQ9C0B1 505 aaKnown RBP eCLIP10.21□□□□□ -0.78
VAPB-201ENST00000265619 ZSWIM4Q9H7M6 989 aa10.21□□□□□ -0.78
VAPB-201ENST00000265619 FLT4P35916 1363 aa10.21□□□□□ -0.78
VAPB-201ENST00000265619 MCM6Q14566 821 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 MNS1Q8NEH6 495 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 TCEANC2Q96MN5 208 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 CLIC6Q96NY7 704 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 API5Q9BZZ5 524 aaKnown RBP10.2□□□□□ -0.78
VAPB-201ENST00000265619 KCND1Q9NSA2 647 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 PSD3Q9NYI0 1048 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 ATP6V1DQ9Y5K8 247 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 F6X3S4 739 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 GOLGA6L19H0YKK7 550 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 GNL2Q13823 731 aaKnown RBP10.2□□□□□ -0.78
VAPB-201ENST00000265619 FBXW10Q5XX13 1052 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 ZNF530Q6P9A1 599 aaPredicted RBP10.2□□□□□ -0.78
VAPB-201ENST00000265619 SUGP1Q8IWZ8 645 aaKnown RBP10.2□□□□□ -0.78
VAPB-201ENST00000265619 AOPEPQ8N6M6 819 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 TFRCP02786 760 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms