RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 ORC3Q9UBD5 711 aaPredicted RBP18.92■□□□□ 0.62
PDZRN3-201ENST00000263666 CPSF1Q10570 1443 aaKnown RBP18.92■□□□□ 0.62
PDZRN3-201ENST00000263666 SASH1O94885 1247 aa18.92■□□□□ 0.62
PDZRN3-201ENST00000263666 SKILP12757 684 aa18.92■□□□□ 0.62
PDZRN3-201ENST00000263666 ZNF790Q6PG37 636 aa18.92■□□□□ 0.62
PDZRN3-201ENST00000263666 PDLIM2Q96JY6 352 aa18.92■□□□□ 0.62
PDZRN3-201ENST00000263666 CLEC17AQ6ZS10 378 aa18.92■□□□□ 0.62
PDZRN3-201ENST00000263666 CFAP100Q494V2 611 aa18.91■□□□□ 0.62
PDZRN3-201ENST00000263666 ZSWIM6Q9HCJ5 1215 aa18.91■□□□□ 0.62
PDZRN3-201ENST00000263666 KLF18A0A0U1RQI7 1052 aa18.91■□□□□ 0.62
PDZRN3-201ENST00000263666 PRIMPOLQ96LW4 560 aa18.91■□□□□ 0.62
PDZRN3-201ENST00000263666 LMOD1P29536 600 aaPredicted RBP18.91■□□□□ 0.62
PDZRN3-201ENST00000263666 CRB1P82279 1406 aa18.9■□□□□ 0.62
PDZRN3-201ENST00000263666 PTPN21Q16825 1174 aa18.9■□□□□ 0.62
PDZRN3-201ENST00000263666 DEPDC5O75140 1603 aa18.9■□□□□ 0.62
PDZRN3-201ENST00000263666 EXOC5O00471 708 aa18.9■□□□□ 0.62
PDZRN3-201ENST00000263666 METTL24Q5JXM2 366 aa18.9■□□□□ 0.62
PDZRN3-201ENST00000263666 PPLO60437 1756 aa18.9■□□□□ 0.62
PDZRN3-201ENST00000263666 SNRPA1P09661 255 aaKnown RBP18.89■□□□□ 0.62
PDZRN3-201ENST00000263666 TNNI3KQ59H18 835 aa18.89■□□□□ 0.62
PDZRN3-201ENST00000263666 MYRIPQ8NFW9 859 aa18.89■□□□□ 0.62
PDZRN3-201ENST00000263666 BCL2L12Q9HB09 334 aa18.89■□□□□ 0.62
PDZRN3-201ENST00000263666 FPGT-TNNI3KV9GXZ4 949 aa18.89■□□□□ 0.62
PDZRN3-201ENST00000263666 LMTK3Q96Q04 1460 aa18.89■□□□□ 0.62
PDZRN3-201ENST00000263666 AKAP17AQ02040 695 aaKnown RBP18.89■□□□□ 0.61
PDZRN3-201ENST00000263666 IMMTQ16891 758 aaKnown RBP18.89■□□□□ 0.61
PDZRN3-201ENST00000263666 EPHA10Q5JZY3 1008 aa18.89■□□□□ 0.61
PDZRN3-201ENST00000263666 KIF6Q6ZMV9 814 aa18.89■□□□□ 0.61
PDZRN3-201ENST00000263666 TRERF1Q96PN7 1200 aa18.89■□□□□ 0.61
PDZRN3-201ENST00000263666 LRRFIP1Q32MZ4 808 aaKnown RBP18.89■□□□□ 0.61
PDZRN3-201ENST00000263666 ANO10Q9NW15 660 aa18.89■□□□□ 0.61
PDZRN3-201ENST00000263666 A1BGP04217 495 aa18.89■□□□□ 0.61
PDZRN3-201ENST00000263666 GCKRQ14397 625 aa18.89■□□□□ 0.61
PDZRN3-201ENST00000263666 PAG1Q9NWQ8 432 aa18.89■□□□□ 0.61
PDZRN3-201ENST00000263666 FRMPD1Q5SYB0 1578 aa18.88■□□□□ 0.61
PDZRN3-201ENST00000263666 HELBQ8NG08 1087 aaPredicted RBP18.88■□□□□ 0.61
PDZRN3-201ENST00000263666 ADGRB2O60241 1585 aa18.88■□□□□ 0.61
PDZRN3-201ENST00000263666 ARHGEF28Q8N1W1 1705 aaKnown RBP18.88■□□□□ 0.61
PDZRN3-201ENST00000263666 DBNLQ9UJU6 430 aaKnown RBP18.88■□□□□ 0.61
PDZRN3-201ENST00000263666 AOX1Q06278 1338 aa18.88■□□□□ 0.61
PDZRN3-201ENST00000263666 CEP135Q66GS9 1140 aa18.88■□□□□ 0.61
PDZRN3-201ENST00000263666 HMG20BQ9P0W2 317 aa18.88■□□□□ 0.61
PDZRN3-201ENST00000263666 KLHL10Q6JEL2 608 aa18.87■□□□□ 0.61
PDZRN3-201ENST00000263666 IQSEC3Q9UPP2 1182 aaPredicted RBP18.87■□□□□ 0.61
PDZRN3-201ENST00000263666 SFPQP23246 707 aaKnown RBP eCLIP18.87■□□□□ 0.61
PDZRN3-201ENST00000263666 STX1AQ16623 288 aa18.87■□□□□ 0.61
PDZRN3-201ENST00000263666 OLFM4Q6UX06 510 aa18.87■□□□□ 0.61
PDZRN3-201ENST00000263666 POLA2Q14181 598 aa18.87■□□□□ 0.61
PDZRN3-201ENST00000263666 ARID5BQ14865 1188 aa18.87■□□□□ 0.61
PDZRN3-201ENST00000263666 ZCRB1Q8TBF4 217 aaKnown RBP18.87■□□□□ 0.61
PDZRN3-201ENST00000263666 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.87■□□□□ 0.61
PDZRN3-201ENST00000263666 GPHNQ9NQX3 736 aaPredicted RBP18.86■□□□□ 0.61
PDZRN3-201ENST00000263666 COL9A3Q14050 684 aaPredicted RBP18.86■□□□□ 0.61
PDZRN3-201ENST00000263666 NAA30Q147X3 362 aaPredicted RBP18.86■□□□□ 0.61
PDZRN3-201ENST00000263666 CCDC69A6NI79 296 aa18.86■□□□□ 0.61
PDZRN3-201ENST00000263666 NEURL1BA8MQ27 555 aa18.86■□□□□ 0.61
PDZRN3-201ENST00000263666 SLC3A2P08195 630 aaKnown RBP18.86■□□□□ 0.61
PDZRN3-201ENST00000263666 TTC14Q96N46 770 aa18.86■□□□□ 0.61
PDZRN3-201ENST00000263666 DHX16O60231 1041 aaKnown RBP18.85■□□□□ 0.61
PDZRN3-201ENST00000263666 ZSWIM4Q9H7M6 989 aa18.85■□□□□ 0.61
PDZRN3-201ENST00000263666 CLTCQ00610 1675 aaKnown RBP18.85■□□□□ 0.61
PDZRN3-201ENST00000263666 MAP4K1Q92918 833 aa18.85■□□□□ 0.61
PDZRN3-201ENST00000263666 GJB4Q9NTQ9 266 aa18.85■□□□□ 0.61
PDZRN3-201ENST00000263666 MRVI1Q9Y6F6 885 aa18.85■□□□□ 0.61
PDZRN3-201ENST00000263666 ZNF213O14771 459 aa18.85■□□□□ 0.61
PDZRN3-201ENST00000263666 SAFBQ15424 915 aaKnown RBP eCLIP18.85■□□□□ 0.61
PDZRN3-201ENST00000263666 CWC25Q9NXE8 425 aaPredicted RBP18.85■□□□□ 0.61
PDZRN3-201ENST00000263666 SKIDA1Q1XH10 827 aa18.85■□□□□ 0.61
PDZRN3-201ENST00000263666 SLC4A8Q2Y0W8 1093 aa18.85■□□□□ 0.61
PDZRN3-201ENST00000263666 CPLX3Q8WVH0 158 aa18.85■□□□□ 0.61
PDZRN3-201ENST00000263666 USP28Q96RU2 1077 aa18.85■□□□□ 0.61
PDZRN3-201ENST00000263666 URI1O94763 535 aaPredicted RBP18.84■□□□□ 0.61
PDZRN3-201ENST00000263666 ZNF335Q9H4Z2 1342 aaPredicted RBP18.84■□□□□ 0.61
PDZRN3-201ENST00000263666 ZNF75DP51815 510 aa18.84■□□□□ 0.61
PDZRN3-201ENST00000263666 DHX32Q7L7V1 743 aaKnown RBP18.84■□□□□ 0.61
PDZRN3-201ENST00000263666 FAM89AQ96GI7 184 aa18.84■□□□□ 0.61
PDZRN3-201ENST00000263666 CYP21A2P08686 494 aa18.84■□□□□ 0.61
PDZRN3-201ENST00000263666 NECTIN1Q15223 517 aa18.84■□□□□ 0.61
PDZRN3-201ENST00000263666 SPECC1Q5M775 1068 aa18.84■□□□□ 0.61
PDZRN3-201ENST00000263666 SSH2Q76I76 1423 aa18.84■□□□□ 0.61
PDZRN3-201ENST00000263666 RPAP1Q9BWH6 1393 aaPredicted RBP18.84■□□□□ 0.61
PDZRN3-201ENST00000263666 TAF5LO75529 589 aa18.83■□□□□ 0.61
PDZRN3-201ENST00000263666 CCDC94Q9BW85 323 aaPredicted RBP18.83■□□□□ 0.61
PDZRN3-201ENST00000263666 TMX4Q9H1E5 349 aaPredicted RBP18.83■□□□□ 0.61
PDZRN3-201ENST00000263666 BTG4Q9NY30 223 aa18.83■□□□□ 0.61
PDZRN3-201ENST00000263666 IFNKQ9P0W0 207 aa18.83■□□□□ 0.61
PDZRN3-201ENST00000263666 ABCF2Q9UG63 623 aa18.83■□□□□ 0.61
PDZRN3-201ENST00000263666 LDHAL6AQ6ZMR3 332 aa18.83■□□□□ 0.61
PDZRN3-201ENST00000263666 C8orf37Q96NL8 207 aa18.83■□□□□ 0.61
PDZRN3-201ENST00000263666 TBC1D2BQ9UPU7 963 aa18.83■□□□□ 0.61
PDZRN3-201ENST00000263666 MYL10Q9BUA6 226 aa18.83■□□□□ 0.6
PDZRN3-201ENST00000263666 CLSTN2Q9H4D0 955 aa18.83■□□□□ 0.6
PDZRN3-201ENST00000263666 STARD3NLO95772 234 aa18.82■□□□□ 0.6
PDZRN3-201ENST00000263666 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.82■□□□□ 0.6
PDZRN3-201ENST00000263666 TTLL7Q6ZT98 887 aa18.82■□□□□ 0.6
PDZRN3-201ENST00000263666 KIF18AQ8NI77 898 aa18.82■□□□□ 0.6
PDZRN3-201ENST00000263666 METTL22Q9BUU2 404 aaPredicted RBP18.82■□□□□ 0.6
PDZRN3-201ENST00000263666 A0A1B0GUL7 405 aa18.82■□□□□ 0.6
PDZRN3-201ENST00000263666 PRC1O43663 620 aa18.82■□□□□ 0.6
PDZRN3-201ENST00000263666 LRRC24Q50LG9 513 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms