RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 TTLL5Q6EMB2 1281 aa16.51■□□□□ 0.23
SCARF1-201ENST00000263071 KIAA0232Q92628 1395 aa16.51■□□□□ 0.23
SCARF1-201ENST00000263071 ST5P78524 1137 aa16.51■□□□□ 0.23
SCARF1-201ENST00000263071 CALR3Q96L12 384 aaKnown RBP16.51■□□□□ 0.23
SCARF1-201ENST00000263071 SEC62Q99442 399 aaKnown RBP16.51■□□□□ 0.23
SCARF1-201ENST00000263071 HYPKQ9NX55 129 aa16.51■□□□□ 0.23
SCARF1-201ENST00000263071 NBPF6Q5VWK0 638 aa16.5■□□□□ 0.23
SCARF1-201ENST00000263071 NBPF4Q96M43 638 aa16.5■□□□□ 0.23
SCARF1-201ENST00000263071 CDK12Q9NYV4 1490 aaPredicted RBP16.5■□□□□ 0.23
SCARF1-201ENST00000263071 MAGEA9P43362 315 aa16.5■□□□□ 0.23
SCARF1-201ENST00000263071 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
SCARF1-201ENST00000263071 CREB3L3Q68CJ9 461 aa16.5■□□□□ 0.23
SCARF1-201ENST00000263071 MCTP2Q6DN12 878 aa16.5■□□□□ 0.23
SCARF1-201ENST00000263071 SSH3Q8TE77 659 aa16.5■□□□□ 0.23
SCARF1-201ENST00000263071 ARHGAP31Q2M1Z3 1444 aa16.5■□□□□ 0.23
SCARF1-201ENST00000263071 RPAP1Q9BWH6 1393 aaPredicted RBP16.5■□□□□ 0.23
SCARF1-201ENST00000263071 A0A0D9SFI3 127 aa16.5■□□□□ 0.23
SCARF1-201ENST00000263071 BECN2A8MW95 431 aa16.5■□□□□ 0.23
SCARF1-201ENST00000263071 ZC3H6P61129 1189 aaKnown RBP16.5■□□□□ 0.23
SCARF1-201ENST00000263071 DDX46Q7L014 1031 aaKnown RBP16.5■□□□□ 0.23
SCARF1-201ENST00000263071 ARGLU1Q9NWB6 273 aaPredicted RBP16.5■□□□□ 0.23
SCARF1-201ENST00000263071 FAM53CQ9NYF3 392 aa16.5■□□□□ 0.23
SCARF1-201ENST00000263071 TMCO3Q6UWJ1 677 aa16.49■□□□□ 0.23
SCARF1-201ENST00000263071 GOLGA5Q8TBA6 731 aa16.49■□□□□ 0.23
SCARF1-201ENST00000263071 KNDC1Q76NI1 1749 aa16.49■□□□□ 0.23
SCARF1-201ENST00000263071 GOLGA6L19H0YKK7 550 aa16.49■□□□□ 0.23
SCARF1-201ENST00000263071 TYRO3Q06418 890 aa16.49■□□□□ 0.23
SCARF1-201ENST00000263071 FBXO18Q8NFZ0 1043 aa16.49■□□□□ 0.23
SCARF1-201ENST00000263071 AATKQ6ZMQ8 1374 aa16.49■□□□□ 0.23
SCARF1-201ENST00000263071 NEURL4Q96JN8 1562 aa16.48■□□□□ 0.23
SCARF1-201ENST00000263071 CRB1P82279 1406 aa16.48■□□□□ 0.23
SCARF1-201ENST00000263071 ARID5BQ14865 1188 aa16.48■□□□□ 0.23
SCARF1-201ENST00000263071 PPM1EQ8WY54 764 aa16.48■□□□□ 0.23
SCARF1-201ENST00000263071 CPSF1Q10570 1443 aaKnown RBP16.48■□□□□ 0.23
SCARF1-201ENST00000263071 SLU7O95391 586 aaKnown RBP16.48■□□□□ 0.23
SCARF1-201ENST00000263071 EAF2Q96CJ1 260 aaPredicted RBP16.48■□□□□ 0.23
SCARF1-201ENST00000263071 BICC1Q9H694 974 aaKnown RBP16.48■□□□□ 0.23
SCARF1-201ENST00000263071 PNMA6AP0CW24 399 aaPredicted RBP16.48■□□□□ 0.23
SCARF1-201ENST00000263071 PTPN14Q15678 1187 aa16.48■□□□□ 0.23
SCARF1-201ENST00000263071 FLT4P35916 1363 aa16.48■□□□□ 0.23
SCARF1-201ENST00000263071 MNAT1P51948 309 aa16.47■□□□□ 0.23
SCARF1-201ENST00000263071 GORABQ5T7V8 394 aa16.47■□□□□ 0.23
SCARF1-201ENST00000263071 ATP7BP35670 1465 aa16.47■□□□□ 0.23
SCARF1-201ENST00000263071 CLSTN1O94985 981 aa16.47■□□□□ 0.23
SCARF1-201ENST00000263071 ZNF165P49910 485 aa16.47■□□□□ 0.23
SCARF1-201ENST00000263071 ZRSR1Q15695 479 aaKnown RBP16.47■□□□□ 0.23
SCARF1-201ENST00000263071 STAP2Q9UGK3 403 aa16.47■□□□□ 0.23
SCARF1-201ENST00000263071 A0A0G2JS52 829 aa16.47■□□□□ 0.23
SCARF1-201ENST00000263071 H0YHG0 523 aa16.47■□□□□ 0.23
SCARF1-201ENST00000263071 BIN1O00499 593 aa16.47■□□□□ 0.23
SCARF1-201ENST00000263071 SARNPP82979 210 aaKnown RBP16.47■□□□□ 0.23
SCARF1-201ENST00000263071 ZNF589Q86UQ0 364 aaPredicted RBP16.47■□□□□ 0.23
SCARF1-201ENST00000263071 TSPOAP1O95153 1857 aa16.46■□□□□ 0.23
SCARF1-201ENST00000263071 MPHOSPH10O00566 681 aaKnown RBP16.46■□□□□ 0.23
SCARF1-201ENST00000263071 PPP1R12AO14974 1030 aaPredicted RBP16.46■□□□□ 0.23
SCARF1-201ENST00000263071 NR1I2O75469 434 aa16.46■□□□□ 0.23
SCARF1-201ENST00000263071 BRF1Q92994 677 aa16.46■□□□□ 0.23
SCARF1-201ENST00000263071 KIF24Q5T7B8 1368 aa16.46■□□□□ 0.23
SCARF1-201ENST00000263071 CSB-PGBD3P0DP91 1061 aa16.46■□□□□ 0.23
SCARF1-201ENST00000263071 MYD88Q99836 296 aa16.46■□□□□ 0.23
SCARF1-201ENST00000263071 PTPN21Q16825 1174 aa16.45■□□□□ 0.22
SCARF1-201ENST00000263071 HSP90AB4PQ58FF6 505 aa16.45■□□□□ 0.22
SCARF1-201ENST00000263071 BEND3Q5T5X7 828 aa16.45■□□□□ 0.22
SCARF1-201ENST00000263071 SUCLG2Q96I99 432 aa16.45■□□□□ 0.22
SCARF1-201ENST00000263071 NCOA5Q9HCD5 579 aaKnown RBP16.45■□□□□ 0.22
SCARF1-201ENST00000263071 ZCCHC17Q9NP64 241 aaKnown RBP16.45■□□□□ 0.22
SCARF1-201ENST00000263071 KCNA6P17658 529 aa16.45■□□□□ 0.22
SCARF1-201ENST00000263071 OTUD7BQ6GQQ9 843 aa16.45■□□□□ 0.22
SCARF1-201ENST00000263071 CLIP2Q9UDT6 1046 aa16.45■□□□□ 0.22
SCARF1-201ENST00000263071 SALL3Q9BXA9 1300 aa16.45■□□□□ 0.22
SCARF1-201ENST00000263071 PLA2G4AP47712 749 aa16.45■□□□□ 0.22
SCARF1-201ENST00000263071 ERCC6LQ2NKX8 1250 aa16.45■□□□□ 0.22
SCARF1-201ENST00000263071 TTC14Q96N46 770 aa16.45■□□□□ 0.22
SCARF1-201ENST00000263071 CBX8Q9HC52 389 aa16.45■□□□□ 0.22
SCARF1-201ENST00000263071 ATG3Q9NT62 314 aa16.45■□□□□ 0.22
SCARF1-201ENST00000263071 CCDC171Q6TFL3 1326 aa16.45■□□□□ 0.22
SCARF1-201ENST00000263071 IVLP07476 585 aa16.44■□□□□ 0.22
SCARF1-201ENST00000263071 HSP90AA4PQ58FG1 418 aa16.44■□□□□ 0.22
SCARF1-201ENST00000263071 FHOD1Q9Y613 1164 aa16.44■□□□□ 0.22
SCARF1-201ENST00000263071 USP32Q8NFA0 1604 aa16.44■□□□□ 0.22
SCARF1-201ENST00000263071 SLC27A2O14975 620 aa16.44■□□□□ 0.22
SCARF1-201ENST00000263071 ME1P48163 572 aa16.44■□□□□ 0.22
SCARF1-201ENST00000263071 EIF4A1P60842 406 aaKnown RBP16.44■□□□□ 0.22
SCARF1-201ENST00000263071 NLRP2Q9NX02 1062 aa16.44■□□□□ 0.22
SCARF1-201ENST00000263071 A2ML1A8K2U0 1454 aa16.44■□□□□ 0.22
SCARF1-201ENST00000263071 CLCN6P51797 869 aa16.44■□□□□ 0.22
SCARF1-201ENST00000263071 USP16Q9Y5T5 823 aa16.44■□□□□ 0.22
SCARF1-201ENST00000263071 MAP3K5Q99683 1374 aa16.43■□□□□ 0.22
SCARF1-201ENST00000263071 OAS2P29728 719 aaKnown RBP16.43■□□□□ 0.22
SCARF1-201ENST00000263071 HAND2P61296 217 aa16.43■□□□□ 0.22
SCARF1-201ENST00000263071 SF3A1Q15459 793 aaKnown RBP16.43■□□□□ 0.22
SCARF1-201ENST00000263071 MMS22LQ6ZRQ5 1243 aa16.43■□□□□ 0.22
SCARF1-201ENST00000263071 FAM177A1Q8N128 213 aaPredicted RBP16.43■□□□□ 0.22
SCARF1-201ENST00000263071 CCDC196A0A1B0GTZ2 297 aa16.43■□□□□ 0.22
SCARF1-201ENST00000263071 SNRKQ9NRH2 765 aa16.43■□□□□ 0.22
SCARF1-201ENST00000263071 FBXO3Q9UK99 471 aa16.43■□□□□ 0.22
SCARF1-201ENST00000263071 EIF3CLB5ME19 914 aaKnown RBP16.42■□□□□ 0.22
SCARF1-201ENST00000263071 UBE3BQ7Z3V4 1068 aa16.42■□□□□ 0.22
SCARF1-201ENST00000263071 FAM200AQ8TCP9 573 aa16.42■□□□□ 0.22
SCARF1-201ENST00000263071 EIF3CQ99613 913 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms