RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 ARGLU1Q9NWB6 273 aaPredicted RBP17.48■□□□□ 0.39
XRCC1-201ENST00000262887 MED23Q9ULK4 1368 aa17.48■□□□□ 0.39
XRCC1-201ENST00000262887 PSDA5PKW4 1024 aaPredicted RBP17.48■□□□□ 0.39
XRCC1-201ENST00000262887 ANXA1P04083 346 aa17.48■□□□□ 0.39
XRCC1-201ENST00000262887 NBPF11Q86T75 865 aa17.48■□□□□ 0.39
XRCC1-201ENST00000262887 FBXW7Q969H0 707 aa17.48■□□□□ 0.39
XRCC1-201ENST00000262887 NAT10Q9H0A0 1025 aaKnown RBP17.48■□□□□ 0.39
XRCC1-201ENST00000262887 BOLA2Q9H3K6 86 aa17.48■□□□□ 0.39
XRCC1-201ENST00000262887 TOPAZ1Q8N9V7 1692 aa17.48■□□□□ 0.39
XRCC1-201ENST00000262887 TUBB4AP04350 444 aa17.48■□□□□ 0.39
XRCC1-201ENST00000262887 ZNF589Q86UQ0 364 aaPredicted RBP17.48■□□□□ 0.39
XRCC1-201ENST00000262887 FTOQ9C0B1 505 aaKnown RBP eCLIP17.48■□□□□ 0.39
XRCC1-201ENST00000262887 TPM4P67936 248 aa17.47■□□□□ 0.39
XRCC1-201ENST00000262887 TMCO3Q6UWJ1 677 aa17.47■□□□□ 0.39
XRCC1-201ENST00000262887 EAF2Q96CJ1 260 aaPredicted RBP17.47■□□□□ 0.39
XRCC1-201ENST00000262887 ZRANB2O95218 330 aaKnown RBP eCLIP17.47■□□□□ 0.39
XRCC1-201ENST00000262887 KRT32Q14532 448 aa17.47■□□□□ 0.39
XRCC1-201ENST00000262887 TSGA10IPQ3SY00 556 aa17.47■□□□□ 0.39
XRCC1-201ENST00000262887 CCDC150Q8NCX0 1101 aa17.47■□□□□ 0.39
XRCC1-201ENST00000262887 SYTL4Q96C24 671 aaPredicted RBP17.47■□□□□ 0.39
XRCC1-201ENST00000262887 RCOR1Q9UKL0 485 aa17.47■□□□□ 0.39
XRCC1-201ENST00000262887 FOSBP53539 338 aa17.46■□□□□ 0.39
XRCC1-201ENST00000262887 NEK1Q96PY6 1258 aa17.46■□□□□ 0.39
XRCC1-201ENST00000262887 ADD1P35611 737 aaKnown RBP17.46■□□□□ 0.39
XRCC1-201ENST00000262887 EIF4A1P60842 406 aaKnown RBP17.46■□□□□ 0.39
XRCC1-201ENST00000262887 FAM160A1Q05DH4 1040 aa17.46■□□□□ 0.39
XRCC1-201ENST00000262887 RAD51AP2Q09MP3 1159 aa17.46■□□□□ 0.39
XRCC1-201ENST00000262887 Q6ZUG5 572 aa17.46■□□□□ 0.39
XRCC1-201ENST00000262887 UBXN4Q92575 508 aa17.46■□□□□ 0.39
XRCC1-201ENST00000262887 ERCC4Q92889 916 aaPredicted RBP17.46■□□□□ 0.39
XRCC1-201ENST00000262887 FEZ2Q9UHY8 353 aaPredicted RBP17.46■□□□□ 0.39
XRCC1-201ENST00000262887 TLR7Q9NYK1 1049 aaKnown RBP17.45■□□□□ 0.38
XRCC1-201ENST00000262887 POLR3GO15318 223 aaPredicted RBP17.45■□□□□ 0.38
XRCC1-201ENST00000262887 NRDCO43847 1150 aa17.45■□□□□ 0.38
XRCC1-201ENST00000262887 SASH1O94885 1247 aa17.45■□□□□ 0.38
XRCC1-201ENST00000262887 KCNJ6P48051 423 aa17.45■□□□□ 0.38
XRCC1-201ENST00000262887 G3BP1Q13283 466 aaKnown RBP eCLIP17.45■□□□□ 0.38
XRCC1-201ENST00000262887 TXLNBQ8N3L3 684 aa17.45■□□□□ 0.38
XRCC1-201ENST00000262887 ORC3Q9UBD5 711 aaPredicted RBP17.45■□□□□ 0.38
XRCC1-201ENST00000262887 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.45■□□□□ 0.38
XRCC1-201ENST00000262887 SFPQP23246 707 aaKnown RBP eCLIP17.44■□□□□ 0.38
XRCC1-201ENST00000262887 GORABQ5T7V8 394 aa17.44■□□□□ 0.38
XRCC1-201ENST00000262887 NUTM2GQ5VZR2 741 aa17.44■□□□□ 0.38
XRCC1-201ENST00000262887 ARMCX5Q6P1M9 558 aa17.44■□□□□ 0.38
XRCC1-201ENST00000262887 FSIP1Q8NA03 581 aa17.44■□□□□ 0.38
XRCC1-201ENST00000262887 TAF5LO75529 589 aa17.44■□□□□ 0.38
XRCC1-201ENST00000262887 SMC2O95347 1197 aa17.44■□□□□ 0.38
XRCC1-201ENST00000262887 HOXB7P09629 217 aa17.44■□□□□ 0.38
XRCC1-201ENST00000262887 ME1P48163 572 aa17.44■□□□□ 0.38
XRCC1-201ENST00000262887 HDGFP51858 240 aaKnown RBP17.44■□□□□ 0.38
XRCC1-201ENST00000262887 TMC6Q7Z403 805 aa17.44■□□□□ 0.38
XRCC1-201ENST00000262887 HOMER1Q86YM7 354 aa17.44■□□□□ 0.38
XRCC1-201ENST00000262887 ENGASEQ8NFI3 743 aa17.44■□□□□ 0.38
XRCC1-201ENST00000262887 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
XRCC1-201ENST00000262887 USP28Q96RU2 1077 aa17.44■□□□□ 0.38
XRCC1-201ENST00000262887 MYH15Q9Y2K3 1946 aa17.44■□□□□ 0.38
XRCC1-201ENST00000262887 JCADQ9P266 1359 aa17.43■□□□□ 0.38
XRCC1-201ENST00000262887 SCRN1Q12765 414 aa17.43■□□□□ 0.38
XRCC1-201ENST00000262887 NEK11Q8NG66 645 aa17.43■□□□□ 0.38
XRCC1-201ENST00000262887 ESF1Q9H501 851 aaKnown RBP17.43■□□□□ 0.38
XRCC1-201ENST00000262887 HDAC5Q9UQL6 1122 aa17.43■□□□□ 0.38
XRCC1-201ENST00000262887 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.43■□□□□ 0.38
XRCC1-201ENST00000262887 MAP3K2Q9Y2U5 619 aa17.43■□□□□ 0.38
XRCC1-201ENST00000262887 DHX8Q14562 1220 aaKnown RBP17.43■□□□□ 0.38
XRCC1-201ENST00000262887 ZRSR1Q15695 479 aaKnown RBP17.43■□□□□ 0.38
XRCC1-201ENST00000262887 NAA16Q6N069 864 aaPredicted RBP17.43■□□□□ 0.38
XRCC1-201ENST00000262887 ZNF396Q96N95 335 aaPredicted RBP17.43■□□□□ 0.38
XRCC1-201ENST00000262887 XPO4Q9C0E2 1151 aaKnown RBP17.43■□□□□ 0.38
XRCC1-201ENST00000262887 ALDH1L1O75891 902 aa17.42■□□□□ 0.38
XRCC1-201ENST00000262887 HOXC9P31274 260 aa17.42■□□□□ 0.38
XRCC1-201ENST00000262887 ETF1P62495 437 aaKnown RBP17.42■□□□□ 0.38
XRCC1-201ENST00000262887 USPL1Q5W0Q7 1092 aa17.42■□□□□ 0.38
XRCC1-201ENST00000262887 MNS1Q8NEH6 495 aa17.42■□□□□ 0.38
XRCC1-201ENST00000262887 SMARCC2Q8TAQ2 1214 aa17.42■□□□□ 0.38
XRCC1-201ENST00000262887 SDF4Q9BRK5 362 aa17.42■□□□□ 0.38
XRCC1-201ENST00000262887 PHLPP2Q6ZVD8 1323 aa17.42■□□□□ 0.38
XRCC1-201ENST00000262887 CWF19L2Q2TBE0 894 aaKnown RBP17.42■□□□□ 0.38
XRCC1-201ENST00000262887 MUM1L1Q5H9M0 696 aa17.42■□□□□ 0.38
XRCC1-201ENST00000262887 NGDNQ8NEJ9 315 aaKnown RBP17.42■□□□□ 0.38
XRCC1-201ENST00000262887 LRRC2Q9BYS8 371 aa17.42■□□□□ 0.38
XRCC1-201ENST00000262887 IFNKQ9P0W0 207 aa17.42■□□□□ 0.38
XRCC1-201ENST00000262887 DNAI1Q9UI46 699 aa17.42■□□□□ 0.38
XRCC1-201ENST00000262887 PTPRUQ92729 1446 aa17.41■□□□□ 0.38
XRCC1-201ENST00000262887 ATP8B1O43520 1251 aa17.41■□□□□ 0.38
XRCC1-201ENST00000262887 SIL1Q9H173 461 aa17.41■□□□□ 0.38
XRCC1-201ENST00000262887 CCP110O43303 1012 aa17.41■□□□□ 0.38
XRCC1-201ENST00000262887 USHBP1Q8N6Y0 703 aa17.41■□□□□ 0.38
XRCC1-201ENST00000262887 LLPHQ9BRT6 129 aaKnown RBP17.41■□□□□ 0.38
XRCC1-201ENST00000262887 SRRTQ9BXP5 876 aaKnown RBP17.41■□□□□ 0.38
XRCC1-201ENST00000262887 TPM1P09493 284 aa17.4■□□□□ 0.38
XRCC1-201ENST00000262887 EDC3Q96F86 508 aaKnown RBP17.4■□□□□ 0.38
XRCC1-201ENST00000262887 CEMIPQ8WUJ3 1361 aa17.4■□□□□ 0.38
XRCC1-201ENST00000262887 KCNQ3O43525 872 aa17.4■□□□□ 0.38
XRCC1-201ENST00000262887 NLRP6P59044 892 aa17.4■□□□□ 0.38
XRCC1-201ENST00000262887 ATL3Q6DD88 541 aa17.4■□□□□ 0.38
XRCC1-201ENST00000262887 NSUN7Q8NE18 718 aaKnown RBP17.4■□□□□ 0.38
XRCC1-201ENST00000262887 MRPS27Q92552 414 aaKnown RBP17.4■□□□□ 0.38
XRCC1-201ENST00000262887 DBF4Q9UBU7 674 aaPredicted RBP17.4■□□□□ 0.38
XRCC1-201ENST00000262887 NWD1Q149M9 1564 aa17.4■□□□□ 0.38
XRCC1-201ENST00000262887 PTPDC1A2A3K4 754 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms