RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 ADAMTS13Q76LX8 1427 aa17.25■□□□□ 0.35
KCTD3-201ENST00000259154 RASEFQ8IZ41 740 aa17.25■□□□□ 0.35
KCTD3-201ENST00000259154 CARD6Q9BX69 1037 aa17.25■□□□□ 0.35
KCTD3-201ENST00000259154 STRN4Q9NRL3 753 aa17.25■□□□□ 0.35
KCTD3-201ENST00000259154 CRB1P82279 1406 aa17.25■□□□□ 0.35
KCTD3-201ENST00000259154 ANKRD65E5RJM6 399 aa17.25■□□□□ 0.35
KCTD3-201ENST00000259154 KCNA6P17658 529 aa17.25■□□□□ 0.35
KCTD3-201ENST00000259154 PAXIP1Q6ZW49 1069 aaPredicted RBP17.25■□□□□ 0.35
KCTD3-201ENST00000259154 KLHDC4Q8TBB5 520 aa17.25■□□□□ 0.35
KCTD3-201ENST00000259154 INTS4Q96HW7 963 aaKnown RBP17.25■□□□□ 0.35
KCTD3-201ENST00000259154 FAM107BQ9H098 131 aa17.25■□□□□ 0.35
KCTD3-201ENST00000259154 LGR6Q9HBX8 967 aa17.25■□□□□ 0.35
KCTD3-201ENST00000259154 CEP170BQ9Y4F5 1589 aaPredicted RBP17.25■□□□□ 0.35
KCTD3-201ENST00000259154 USP6P35125 1406 aa17.24■□□□□ 0.35
KCTD3-201ENST00000259154 CAPN2P17655 700 aa17.24■□□□□ 0.35
KCTD3-201ENST00000259154 SAFBQ15424 915 aaKnown RBP eCLIP17.24■□□□□ 0.35
KCTD3-201ENST00000259154 ZSCAN25Q6NSZ9 544 aa17.24■□□□□ 0.35
KCTD3-201ENST00000259154 LRRC59Q96AG4 307 aaKnown RBP17.24■□□□□ 0.35
KCTD3-201ENST00000259154 EDC3Q96F86 508 aaKnown RBP17.24■□□□□ 0.35
KCTD3-201ENST00000259154 FAM227BQ96M60 508 aa17.24■□□□□ 0.35
KCTD3-201ENST00000259154 LZTFL1Q9NQ48 299 aa17.24■□□□□ 0.35
KCTD3-201ENST00000259154 ST7Q9NRC1 585 aa17.24■□□□□ 0.35
KCTD3-201ENST00000259154 ZNF142P52746 1687 aaPredicted RBP17.24■□□□□ 0.35
KCTD3-201ENST00000259154 ZNF75DP51815 510 aa17.24■□□□□ 0.35
KCTD3-201ENST00000259154 NR1I2O75469 434 aa17.24■□□□□ 0.35
KCTD3-201ENST00000259154 DNAJC21Q5F1R6 531 aaKnown RBP17.24■□□□□ 0.35
KCTD3-201ENST00000259154 TTC6Q86TZ1 520 aa17.24■□□□□ 0.35
KCTD3-201ENST00000259154 NUP133Q8WUM0 1156 aa17.24■□□□□ 0.35
KCTD3-201ENST00000259154 VPS18Q9P253 973 aa17.24■□□□□ 0.35
KCTD3-201ENST00000259154 RHOXF2BP0C7M4 288 aa17.23■□□□□ 0.35
KCTD3-201ENST00000259154 C8orf76Q96K31 380 aa17.23■□□□□ 0.35
KCTD3-201ENST00000259154 RHOXF2Q9BQY4 288 aa17.23■□□□□ 0.35
KCTD3-201ENST00000259154 NCOA5Q9HCD5 579 aaKnown RBP17.23■□□□□ 0.35
KCTD3-201ENST00000259154 XRN1Q8IZH2 1706 aaKnown RBP17.23■□□□□ 0.35
KCTD3-201ENST00000259154 UBASH3AP57075 661 aa17.23■□□□□ 0.35
KCTD3-201ENST00000259154 ACBD3Q9H3P7 528 aa17.23■□□□□ 0.35
KCTD3-201ENST00000259154 CCDC70Q6NSX1 233 aa17.23■□□□□ 0.35
KCTD3-201ENST00000259154 CACTINQ8WUQ7 758 aaKnown RBP17.23■□□□□ 0.35
KCTD3-201ENST00000259154 NMIQ13287 307 aaPredicted RBP17.22■□□□□ 0.35
KCTD3-201ENST00000259154 KIAA1524Q8TCG1 905 aa17.22■□□□□ 0.35
KCTD3-201ENST00000259154 HINFPQ9BQA5 517 aa17.22■□□□□ 0.35
KCTD3-201ENST00000259154 ARFGAP3Q9NP61 516 aa17.22■□□□□ 0.35
KCTD3-201ENST00000259154 NALCNQ8IZF0 1738 aa17.22■□□□□ 0.35
KCTD3-201ENST00000259154 GTF2A1P52655 376 aaPredicted RBP17.22■□□□□ 0.35
KCTD3-201ENST00000259154 CCDC129Q6ZRS4 1044 aa17.22■□□□□ 0.35
KCTD3-201ENST00000259154 GDAP1L1Q96MZ0 367 aa17.22■□□□□ 0.35
KCTD3-201ENST00000259154 PRAMEF22A3QJZ6 481 aa17.22■□□□□ 0.35
KCTD3-201ENST00000259154 MATR3P43243 847 aaKnown RBP eCLIP17.22■□□□□ 0.351e-13■■■□□ 18.4
KCTD3-201ENST00000259154 ANAPC15P60006 121 aa17.22■□□□□ 0.35
KCTD3-201ENST00000259154 Q6ZUG5 572 aa17.22■□□□□ 0.35
KCTD3-201ENST00000259154 HOOK1Q9UJC3 728 aaKnown RBP17.22■□□□□ 0.35
KCTD3-201ENST00000259154 ANKRD20A12PQ8NF67 263 aa17.21■□□□□ 0.35
KCTD3-201ENST00000259154 DNAAF4Q8WXU2 420 aa17.21■□□□□ 0.35
KCTD3-201ENST00000259154 CCDC171Q6TFL3 1326 aa17.21■□□□□ 0.35
KCTD3-201ENST00000259154 NPHP3Q7Z494 1330 aa17.21■□□□□ 0.35
KCTD3-201ENST00000259154 PLEKHG3A1L390 1219 aa17.21■□□□□ 0.35
KCTD3-201ENST00000259154 ATP8B2P98198 1209 aa17.21■□□□□ 0.35
KCTD3-201ENST00000259154 GOLGA8FQ08AF8 430 aa17.21■□□□□ 0.35
KCTD3-201ENST00000259154 GOLGA8DPQ0D2H9 430 aa17.21■□□□□ 0.35
KCTD3-201ENST00000259154 CWF19L2Q2TBE0 894 aaKnown RBP17.21■□□□□ 0.35
KCTD3-201ENST00000259154 NEK1Q96PY6 1258 aa17.21■□□□□ 0.35
KCTD3-201ENST00000259154 PLCD4Q9BRC7 762 aa17.21■□□□□ 0.35
KCTD3-201ENST00000259154 OVOS2A0A0J9YW53 1432 aa17.21■□□□□ 0.35
KCTD3-201ENST00000259154 OVOS2Q6IE36 1432 aa17.21■□□□□ 0.35
KCTD3-201ENST00000259154 EVCP57679 992 aa17.21■□□□□ 0.35
KCTD3-201ENST00000259154 ADCK5Q3MIX3 580 aa17.21■□□□□ 0.35
KCTD3-201ENST00000259154 HIP1O00291 1037 aa17.2■□□□□ 0.34
KCTD3-201ENST00000259154 EIF3JO75822 258 aaKnown RBP17.2■□□□□ 0.34
KCTD3-201ENST00000259154 LARGE1O95461 756 aa17.2■□□□□ 0.34
KCTD3-201ENST00000259154 RXRAP19793 462 aa17.2■□□□□ 0.34
KCTD3-201ENST00000259154 GYS2P54840 703 aa17.2■□□□□ 0.34
KCTD3-201ENST00000259154 GPIHBP1Q8IV16 184 aa17.2■□□□□ 0.34
KCTD3-201ENST00000259154 PDLIM2Q96JY6 352 aa17.2■□□□□ 0.34
KCTD3-201ENST00000259154 MARF1Q9Y4F3 1742 aaKnown RBP17.2■□□□□ 0.34
KCTD3-201ENST00000259154 ATP5J2-PTCD1G3V325 749 aa17.2■□□□□ 0.34
KCTD3-201ENST00000259154 GOLIM4O00461 696 aa17.2■□□□□ 0.34
KCTD3-201ENST00000259154 PTCD1O75127 700 aaKnown RBP17.2■□□□□ 0.34
KCTD3-201ENST00000259154 ERLIN1O75477 346 aa17.2■□□□□ 0.34
KCTD3-201ENST00000259154 APOBRQ0VD83 1088 aa17.2■□□□□ 0.34
KCTD3-201ENST00000259154 CREB3L3Q68CJ9 461 aa17.2■□□□□ 0.34
KCTD3-201ENST00000259154 FTOQ9C0B1 505 aaKnown RBP eCLIP17.2■□□□□ 0.34
KCTD3-201ENST00000259154 PTPRCP08575 1304 aa17.2■□□□□ 0.34
KCTD3-201ENST00000259154 ADAMTSL3P82987 1691 aa17.2■□□□□ 0.34
KCTD3-201ENST00000259154 EPB41L2O43491 1005 aaKnown RBP17.2■□□□□ 0.34
KCTD3-201ENST00000259154 NBPF7P0C2Y1 421 aaPredicted RBP17.2■□□□□ 0.34
KCTD3-201ENST00000259154 ZSCAN20P17040 1043 aaPredicted RBP17.2■□□□□ 0.34
KCTD3-201ENST00000259154 ME3Q16798 604 aa17.2■□□□□ 0.34
KCTD3-201ENST00000259154 RUFY3Q7L099 469 aa17.2■□□□□ 0.34
KCTD3-201ENST00000259154 CHPF2Q9P2E5 772 aa17.19■□□□□ 0.34
KCTD3-201ENST00000259154 KIF2AO00139 706 aaPredicted RBP17.19■□□□□ 0.34
KCTD3-201ENST00000259154 CCP110O43303 1012 aa17.19■□□□□ 0.34
KCTD3-201ENST00000259154 SEC31AO94979 1220 aaKnown RBP17.19■□□□□ 0.34
KCTD3-201ENST00000259154 TATP17735 454 aaPredicted RBP17.19■□□□□ 0.34
KCTD3-201ENST00000259154 PTH1RQ03431 593 aa17.19■□□□□ 0.34
KCTD3-201ENST00000259154 RGPD8O14715 1765 aaPredicted RBP17.19■□□□□ 0.34
KCTD3-201ENST00000259154 HOXC9P31274 260 aa17.19■□□□□ 0.34
KCTD3-201ENST00000259154 ERC1Q8IUD2 1116 aa17.19■□□□□ 0.34
KCTD3-201ENST00000259154 RDXP35241 583 aaKnown RBP17.18■□□□□ 0.34
KCTD3-201ENST00000259154 MNAT1P51948 309 aa17.18■□□□□ 0.34
KCTD3-201ENST00000259154 USP54Q70EL1 1684 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms